ID AM948961; SV 1; circular; genomic DNA; STD; VRL; 2760 BP. XX AC AM948961; XX DT 24-MAR-2010 (Rel. 104, Created) DT 22-NOV-2018 (Rel. 139, Last updated, Version 4) XX DE Pedilanthus leaf curl virus complete genome XX KW complete genome. XX OS Pedilanthus leaf curl virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2760 RA Ilyas M.; RT ; RL Submitted (23-MAR-2008) to the INSDC. RL Ilyas M., Plant Biotechnology, Nibge, P.O Box. 577, Jhang Road Faisalabad, RL 38000, PAKISTAN. XX RN [2] RA Ilyas M., Qazi J., Mansoor S., Briddon R.W.; RT "Genetic diversity and phylogeography of begomoviruses infecting legumes in RT Pakistan"; RL J. Gen. Virol. 91(Pt 8):2091-2101(2010). XX DR MD5; 1788a14375b5b56c17e52c59805e6590. DR EuropePMC; PMC5624494; 29018315. DR EuropePMC; PMC6117872; 30165872. XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Pedilanthus leaf curl virus" FT /host="Glycine max" FT /mol_type="genomic DNA" FT /country="Pakistan:Nawab Shah" FT /isolation_source="host leaf" FT /collected_by="Muhammad Ilyas" FT /db_xref="taxon:619631" FT CDS 149..505 FT /gene="av2" FT /product="pre coat protein" FT /db_xref="GOA:D4FUN7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D4FUN7" FT /protein_id="CAQ30266.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPIREPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS 309..1079 FT /gene="av1" FT /product="coat Protein" FT /db_xref="GOA:A0A2K8DT07" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0A2K8DT07" FT /protein_id="CAQ30267.1" FT /translation="MSKRPADIIISTPVSKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(723..974) FT /gene="ac5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:D4FUN9" FT /protein_id="CAQ30268.1" FT /translation="MILILASFLLVIHNIIINSNKLLHESLFLRRILSTGDSCIPFAQN FT LVPITMHILHSRRTGLIIKHVKNLSKILRLVNWSTVSN" FT CDS complement(1076..1480) FT /gene="ac3" FT /product="replication enhancer protein" FT /db_xref="GOA:A0A1J1GI86" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A0A1J1GI86" FT /protein_id="CAQ30269.1" FT /translation="MDSRTGELITAAQAQNGVFIWEIQNPLYFKITEHHNRPFLMNQDI FT ITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLDNLGVISINN FT VVRAVDHVLWNVLEHVVYVNQSSSIKFNIY" FT CDS complement(1221..1625) FT /gene="ac2" FT /product="transcriptional activator protein" FT /db_xref="GOA:A0A0A8KA86" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A0A0A8KA86" FT /protein_id="CAQ30270.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSTEWRIYLGDSKSPLFQDNRAPQQTIPHEPRHHHCPDTVQSQP FT EESVGDTQMFPSLPNLDDLTASDWSFLKGL" FT CDS complement(1528..2613) FT /gene="ac1" FT /product="replication initiation protein" FT /db_xref="GOA:D4FUP2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D4FUP2" FT /protein_id="CAQ30271.1" FT /translation="MAPPKRFQIYAKNFFITYPKCSLTKEEALSQIQNLQTPVNKKYIK FT ICREFHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYL FT EKDGDTLDWGEFQIDGRSARGGQQSANDAYAAALNAGSKSEALRVIKELAPKDYVLQFH FT NLNANLDRIFTPPMEVYVSPFSSSSFDQVPEELEVWAAENVVDAAARPLRPKSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLEGPL FT YSGSNQSAAQASQEGDQASSC" FT CDS complement(2166..2462) FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D4FUP3" FT /protein_id="CAQ30272.1" FT /translation="MKMGNLIFTCSSSSRANTSAKISDSSTLYPQPGQHISIRTFRELS FT QAPTSSPIWRRTETPSTGESFRSMEDLQEGDNSQPTTLTPQRLTQAVSQRLLE" XX SQ Sequence 2760 BP; 732 A; 560 C; 650 G; 818 T; 0 other; accggatggc cgcgattttt ttttttgtgg tccccacaaa gcactaacgg acaatgacat 60 gttgaccaat gagaattgtt cctcgtagcc taattgtttc gtggtccccc ctataaactt 120 agtgcgcaag ttgtgttttc cattcactat gtgggatccg ttattgaacg agtttcccga 180 aaccgttcac ggttttaggt gtatgttagc agttaaatat ctgcagttag tagaaaatac 240 gtattcccca gatactctgg gatacgattt aattagggat ttgatttcag taataagggc 300 taggaattat gtcgaagcga ccagcagata taatcatttc cacgcccgtt tcgaaggtac 360 gccgccgtct caacttcgac agcccatacg tgagccgtgc tgctgccccc attgtccgcg 420 tcaccaaagc aaaagcatgg gcgaacaggc ccatgaacag aaagcccagg atgtacagga 480 tgtacagaag tccagatgtt cctagaggat gtgaaggccc atgtaaggtc cagtcctttg 540 agtccagaca tgatatccag catataggta aagtcatgtg tgtcagtgat gttactcgtg 600 gaactgggct gacccataga gtgggtaaga gattttgtgt caagtctgtg tatgtgttgg 660 gcaagatttg gatggatgag aacatcaaga ccaagaatca tacgaatagt gttatgtttt 720 ttttagttag agaccgtaga ccagttgaca agcctcagga ttttggagag gtttttaaca 780 tgtttgataa tgagcccagt acggcgactg tgaagaatgt gcatcgtgat aggtaccagg 840 ttctgcgcaa atggtatgca actgtcaccg gtggacaata tgcgtcgaag gaacaagctc 900 tcgtgaagaa gtttattaga gttaataatt atgttgtgta taaccagcaa gaagctggca 960 agtatgagaa tcattctgag aatgcgttaa tgttgtatat ggcgtgtact cacgcctcta 1020 atccagtgta tgctactttg aagatacgga tctacttcta tgattccgtg acaaattaat 1080 aaatattgaa ttttattgaa gatgattggt ttacatatac aacatgctct aatacattcc 1140 ataatacatg atcaactgct ctaactacat tattaatact gataactcct agattatcta 1200 aatacttaag cacttgggtc ttaaagaccc ttaagaaacg accagtcgga ggctgtgagg 1260 tcatccagat tcggaaggct aggaaacatt tgtgtatccc caacgctttc ctcaggttgt 1320 gattgaactg tatctggaca gtgatgatgt cttggttcat gaggaatggt ctgttgtggt 1380 gctctgttat cttgaaatag aggggatttt gaatctccca gataaatacg ccattctgtg 1440 cttgagctgc agtgatgagt tcccctgtgc gtgaatccat ggttgtggca ggctaatgct 1500 atgaagtatg aacacccaca cgggagatca acacgacgac gcctggtccc cttcttggct 1560 agcctgtgct gcactttgat tggaacctga gtagagtggg ccttcgaggg tgatgaaggt 1620 cgcattcttt aatgcccaat ttttaagtgc agaattcttc tcctcatcca aaaactcttt 1680 atagcttgag ttgggtcctg gattgcagag gaagatagcg ggaattccgc ctttaatttg 1740 aactggcttt ccgtactttg tatttgattg ccagtccctt tgggccccca tgaattcttt 1800 aaagtgcttt aggtagtggg gatcgacgtc atcaatgacg ttgtaccagg cctcgttgct 1860 gtagaccttt ggactaaggt ctaaatgacc acacagataa ttgtgtggac ccagtgacct 1920 ggcccacatc gtcttccccg ttctactatc accctctaag acaatacttt taggtctcaa 1980 tggccgcgca gcggcatcca ccacgttctc agcagcccag acttcaagtt cttccggaac 2040 ttgatcaaaa gaagaagaag aaaaaggaga gacataaacc tccataggag gtgtaaaaat 2100 cctatctaaa ttagcattta aattatgaaa ttgaagtaca taatcttttg gtgctaattc 2160 tttaattact ctaagagcct ctgacttact gcctgcgtta agcgctgcgg cgtaagcgtc 2220 gttggctgac tgttgtcccc ctcttgcaga tcttccatcg atctgaaact ctccccagtc 2280 gagggtgtct ccgtccttct ccagatagga cttgacgtcg gagcttgact tagctccctg 2340 aatgttcgga tggaaatgtg ctgacctggt tggggataca aggtcgaaga atcgctgatt 2400 ttggcacttg tatttgccct cgaactggat gagcacgtga agatgaggtt ccccattttc 2460 atgaaactct ctgcagattt taatgtattt tttgtttact ggggtttgta ggttttggat 2520 ttgggaaagt gcttcctctt tggtgagaga gcacttggga taagtgataa agaaattttt 2580 ggcatatatt tgaaaacgct tgggaggagc cattgacttg gtcaatcggt actcagcatt 2640 agtcctatgg caatcggtga ttggtactca atatatagtg agtaccgaat ggcattatcg 2700 taatttggga aagtaattca aaatcctcac gctccaaaaa gcggccatcc gtataatatt 2760 //