ID   AM933761; SV 1; linear; genomic RNA; STD; VRL; 1356 BP.
XX
AC   AM933761;
XX
DT   31-AUG-2008 (Rel. 97, Created)
DT   31-AUG-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Plum pox virus partial gene for polyprotein, genomic RNA, isolate Troy6
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1356
RA   Palkovics L.;
RT   ;
RL   Submitted (22-JAN-2008) to the INSDC.
RL   Palkovics L., Plant Pathology, Corvinus University of Budapest, Menesi Road
RL   44, H-1118, HUNGARY.
XX
RN   [2]
RA   Szathmary E., Tobias I., Dragojski K., Palkovics L.;
RT   "Partial molecular characterization of an unusual, naturally occurring
RT   recombinant Plum pox virus isolate originated from Bulgaria";
RL   Unpublished.
XX
DR   MD5; 38ae0f7493a41d3b8aa31a9d4b53b9b9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1356
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica cv. Hanita"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="Troy6"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria:Troyan"
FT                   /collected_by="Istvan Tobias, Kalin Dragojski"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..>1356
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR039560"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:B5DC41"
FT                   /protein_id="CAP72056.1"
FT                   /translation="LSTGMHVLKANTINQLISFASDTLDSSMKTYLVGGLEVDKCDEFK
FT                   NVKLLIRSIYKPQIMEQVLKEEPYLLLMSVLSPGVLMALFNSGSLEKATQYWITRSHSL
FT                   AAITSMLSTLAAKVSLASTLNAQMSVIDEHAAVLCDSVFDGTKPYASYMMAVKTLERMK
FT                   ARTESDHTLNDLGFSVLRQATPHLVEKSYLQELEQTWKELSWSEKFSAILESQRWRKHI
FT                   PKPFIPKDGADLGGRYDISVRSLLGNQYKRLRDVVRRKRDDVVCYTHQSMGKLFCKAIG
FT                   ISTSFLPSTLKMLDMLIVFGLLLSIGATCNSMINEHKQLKQLAADREDKKRFKRLQVLY
FT                   TRLSEKVGCTPTADEFLEYVGGENPDLLKHAEDLIGDGQVVVHQSKRNSQANLERVVAF
FT                   VALVMMLFDSERSDGVYKILNKLKGIMGSVDQAVHHQSLDDIEDILDEKKLT"
FT   mat_peptide     <1..104
FT                   /product="HC protein"
FT   mat_peptide     105..1154
FT                   /product="P3 protein"
FT   mat_peptide     1155..1310
FT                   /product="6K1 protein"
FT   mat_peptide     1311..>1356
FT                   /product="CI protein"
XX
SQ   Sequence 1356 BP; 428 A; 267 C; 317 G; 344 T; 0 other;
     cactgtcaac tggaatgcat gttttgaaag cgaacacaat caatcaactt attagctttg        60
     ctagtgatac attggattca agcatgaaaa catacctggt tggaggtctt gaagtggata       120
     agtgtgatga attcaaaaat gtcaagctct tgatcagaag catttacaag ccacaaatca       180
     tggagcaggt gcttaaggaa gaaccatatt tactgctcat gagcgttttg tcacctggtg       240
     tcttaatggc actgttcaat agtggttcat tggagaaagc cacacaatat tggatcacac       300
     gatctcacag cttggcagcg atcacatcaa tgttatcaac acttgcagcc aaagtttcac       360
     ttgcaagtac actgaatgca caaatgagtg tcattgacga acatgcagca gtcctatgtg       420
     atagtgtttt tgatggaacg aagccatatg catcttacat gatggcagtt aaaactttgg       480
     aaaggatgaa agcacggacg gaatccgatc acactttaaa tgacttagga ttctcggtac       540
     tcagacaggc aacaccccac ttggtggaaa aaagttatct ccaggaatta gagcaaactt       600
     ggaaagagtt aagctggtcg gaaaaattct ctgcaatctt ggaatcgcaa cggtggcgaa       660
     aacatatacc aaaacctttc atcccgaaag acggcgcaga tttaggaggc aggtacgata       720
     tctccgttcg gtcattactt ggcaaccagt acaaacgcct gcgagacgta gtccgccgga       780
     aaagagacga tgtagtttgc tatacacacc agtcgatggg gaagctattc tgcaaagcca       840
     tcggaatttc cacaagtttt cttccaagca ctcttaagat gcttgacatg ctcatcgtgt       900
     ttggtctctt gctttcaata ggagccacat gtaactcaat gatcaatgag cataaacagc       960
     ttaagcaact tgccgccgat cgggaagata agaaaaggtt caaaagattg caagtcttat      1020
     acacgagatt atcagagaag gttggttgca caccaacagc agatgaattc ctggagtatg      1080
     tgggaggtga aaaccctgat ttactgaaac atgcagagga tctaattggg gatggtcaag      1140
     ttgttgttca tcaaagcaag agaaactcac aagcaaattt ggaacgggtt gtagcatttg      1200
     tagctcttgt tatgatgctg tttgactcgg agcgaagtga cggcgtgtac aagattctca      1260
     acaaactcaa aggcatcatg gggagtgtcg accaggctgt tcatcatcag agcttggacg      1320
     atatagaaga tatactggat gagaagaagc tcacag                                1356
//