ID   AM930243; SV 1; linear; genomic RNA; STD; VRL; 847 BP.
XX
AC   AM930243;
XX
DT   08-JAN-2008 (Rel. 94, Created)
DT   08-JAN-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and
DE   CP gene for coat protein, genomic RNA, isolate E397
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-847
RA   von Bargen S.;
RT   ;
RL   Submitted (14-DEC-2007) to the INSDC.
RL   von Bargen S., Phytomedicine, Humboldt Universitaet zu Berlin, Lentzeallee
RL   55/57, Berlin, 14195, GERMANY.
XX
RN   [2]
RA   Schwarz D., Paschek U., Bandte M., Buettner C., Obermeier C.;
RT   "Spread and interaction of Pepino mosaic virus (PepMV) and Pythium
RT   aphanidermatum in a closed recirculating system. Effects on tomato growth
RT   and yield";
RL   Unpublished.
XX
DR   MD5; 823fb26b3b26112f974a5cdd3f1bc00a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..847
FT                   /organism="Pepino mosaic virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="E397"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /PCR_primers="fwd_name: PepMV TGB F, fwd_seq:
FT                   cacaccagaagtgcttaaagca, rev_name: PepMV UTR R, rev_seq:
FT                   ctctgattaagtttcgagtg"
FT                   /db_xref="taxon:112229"
FT   CDS             <1..73
FT                   /codon_start=2
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /db_xref="UniProtKB/TrEMBL:B0BK75"
FT                   /protein_id="CAP58903.1"
FT                   /translation="TPEVLKAINFSPWNGLSFPKFEN"
FT   CDS             113..826
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B0BK76"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:B0BK76"
FT                   /protein_id="CAP58904.1"
FT                   /translation="MTDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEEELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
FT   3'UTR           827..>847
XX
SQ   Sequence 847 BP; 245 A; 231 C; 168 G; 203 T; 0 other;
     cacaccagaa gtgcttaaag caatcaactt ctccccttgg aacgggttaa gttttcctaa        60
     atttgaaaat taatattgag tgttcacaaa aaatcaactt caataaacaa tcatgactga       120
     cacaacacct gttgctgcca cttcaagtgc accacccaca gccaaagatg ctggtgccaa       180
     agctccttct gacttctcaa atcccaatac agctcctagt ctcagtgatt tgaagaaagt       240
     caagtacgtc tccaccgtga cctccgtggc cacaccagct gaaattgaag ccctaggtaa       300
     aatcttcacc gctatgggcc ttgccgccaa tgagactggt ccggccatgt gggatctagc       360
     tcgtgcatat gctgatgtgc agagttctaa atcggcacag ctgattggag ctaccccttc       420
     caaccctgca ctatcacgcc gagcccttgc tgctcagttt gatcgaatca atataacccc       480
     caggcaattt tgcatgtact ttgccaaagt tgtttggaac atacttctcg acagcaacat       540
     tccaccagca aattgggcca aacttggtta ccaagaagat acaaaatttg ctgcatttga       600
     cttcttcgat ggagtcacca accctgccag cctgcagcct gctgatggtc ttatcaggca       660
     gccaaatgag gaagaactag ctgctcactc cgtagctaag tacggcgcct tggctaggca       720
     aaagatctcc acaggtaatt atattaccac acttggagaa gtcacacgtg gacacatggg       780
     aggagctaac accatgtacg cgatagacgc accccctgaa ctttaaacac tcgaaactta       840
     atcagag                                                                 847
//