ID   AM922264; SV 1; circular; genomic DNA; STD; VRL; 618 BP.
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AC   AM922264;
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DT   14-DEC-2008 (Rel. 98, Created)
DT   14-DEC-2008 (Rel. 98, Last updated, Version 1)
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DE   Barley dwarf virus complete genome defective form, isolate SA12EcoSm4
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KW   .
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OS   Barley dwarf virus
OC   Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes;
OC   Geplafuvirales; Geminiviridae; Mastrevirus; Wheat dwarf virus.
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RN   [1]
RP   1-618
RA   Schubert J.;
RT   ;
RL   Submitted (10-DEC-2007) to the INSDC.
RL   Schubert J., Institute of Resistance Research, Federal Centre for Breeding
RL   Research, Erwin-Baur-Str. 27, D-06484 Quedlinburg, GERMANY.
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RN   [2]
RA   Schubert J., Habekuss A., Qui Y., Zhou X.;
RT   "Appearance of defective forms of Barley dwarf virus";
RL   Unpublished.
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DR   MD5; 80731cec8d7eca26283564d5338a19b3.
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FH   Key             Location/Qualifiers
FH
FT   source          1..618
FT                   /organism="Barley dwarf virus"
FT                   /isolate="SA12EcoSm4"
FT                   /mol_type="genomic DNA"
FT                   /country="Germany:Saxony-Anhalt, Salzmuende"
FT                   /isolation_source="Hordeum vulgare"
FT                   /collected_by="A. Habekuss"
FT                   /collection_date="12-Mar-2007"
FT                   /identified_by="J. Schubert"
FT                   /db_xref="taxon:497862"
FT   misc_feature    join(384..618,1..92)
FT                   /function="bidirectional promoter"
FT                   /note="long intergenic region"
FT                   /note="contains deletion"
FT   misc_feature    93..205
FT                   /function="promoter"
FT                   /note="short intergenic region"
FT                   /note="5' deletion"
FT   CDS             complement(186..263)
FT                   /pseudo
FT                   /gene="truncated rep"
FT                   /note="5'-terminal part of reading frame missing due to
FT                   deletion"
FT   CDS             complement(255..383)
FT                   /gene="repA"
FT                   /product="hypothetical protein"
FT                   /function="defective repA"
FT                   /note="most of the C-terminal part missing due to deletion"
FT                   /db_xref="UniProtKB/TrEMBL:B7FDD5"
FT                   /protein_id="CAP58254.1"
FT                   /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQYALDSLRTLLAKYV"
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SQ   Sequence 618 BP; 165 A; 143 C; 175 G; 135 T; 0 other;
     accctgcgtg gtgggtcccg aggcgcactc ggcttttcgt gagtgcgccg aggattttgg        60
     accacgtctt tatgtcatca catcaattat tgaagataaa ccaaactatg acatacaaca       120
     cactcataac caaaacatcg aaaaaagaaa tacaaggggc gagatcacac aattttagaa       180
     accgtagccg tccgcgctag gacagtcact gcgaagcagt gacattttcg ccgaaggcga       240
     agaatgattc accctcatac atatttggcc aagagagtgc gaagagagtc caaggcgtac       300
     tgtggctcta ggatgcattg aggatatgtt aggaagaggt atttggaata gacacggaac       360
     ctgggtgcag atgaagaggc catagtagca agcagaagcc cggcaggtcc ttagcgaaaa       420
     aacggggtgt gctcgcgccc tctactctct accctgcgtg ggagtgtgca gaattcacac       480
     cgatgggctc ggtgtccacg gtttaaatat tgcaggttta ggtgggaacg cgggaccctg       540
     tcttttcggc gcgaaagcga cgtgtggtcc cgcgtgtggt ttgtggctcg gggacccgcc       600
     acgcaggaat ctaatatt                                                     618
//