ID AM922262; SV 1; circular; genomic DNA; STD; VRL; 2733 BP. XX AC AM922262; XX DT 14-DEC-2008 (Rel. 98, Created) DT 04-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Wheat dwarf virus complete genome, isolate SA12EcoFL2 XX KW complete genome. XX OS Wheat dwarf virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2733 RA Schubert J.; RT ; RL Submitted (10-DEC-2007) to the INSDC. RL Schubert J., Institute of Resistance Research, Federal Centre for Breeding RL Research, Erwin-Baur-Str. 27, D-06484 Quedlinburg, GERMANY. XX RN [2] RA Schubert J., Habekuss A., Qui Y., Zhou X.; RT "Appearance of defective forms of Wheat dwarf virus"; RL Unpublished. XX DR MD5; 5d6ba8f5f75b4ec22fc3ad78aba9c7d0. XX FH Key Location/Qualifiers FH FT source 1..2733 FT /organism="Wheat dwarf virus" FT /isolate="SA12EcoFL2" FT /mol_type="genomic DNA" FT /country="Germany:Saxony-Anhalt, Salzmuende" FT /isolation_source="Hordeum vulgare" FT /collected_by="A. Habekuss" FT /collection_date="12-Mar-2007" FT /identified_by="J. Schubert" FT /db_xref="taxon:10834" FT misc_feature join(2498..2733,1..170) FT /function="bidirectional promoter" FT /note="long intergenic region" FT CDS 171..443 FT /gene="v1" FT /product="transport protein" FT /db_xref="GOA:Q5K2S1" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:Q5K2S1" FT /protein_id="CAP58245.1" FT /translation="MDQVFTPPRSIRADQYQAPYDPGSSDYAWRTFVFVSFGLLISVGV FT VWLAYTLFLKDCILVWKAKKQRRTEEIGYGNTPARPNGDQQGLPR" FT CDS 415..1197 FT /gene="v2" FT /product="coat protein" FT /db_xref="GOA:A6GVG4" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:A6GVG4" FT /protein_id="CAP58246.1" FT /translation="MVTNKDSRGKGKRKLEEGESSGRWKGQVYKRRKQTYKVVPVRPPA FT LCVYRYNWLNSDKTNIVVGNTPRIDLITCFAAGKADNNRHTNQTILYKFNLQGTCYVSD FT SSCMFITPIRVYHWLVYDAEPKQATPDSTDIFTMPWNLLPSSWTVQRAWSHRFVVKRKW FT CVNLVSDGRKVGSKTVDSRYNYVVGKNIVDASKFVKGLRVTTEWMNTGDGKIGDIKKGA FT LYLVTCTRGGITGDSASISFEVVCAYTHACYFKSIGIQ" FT misc_feature 1198..1368 FT /function="promoter" FT /note="short intergenic region" FT CDS complement(join(1369..1782,1869..2498)) FT /gene="rep" FT /product="replication associated protein" FT /db_xref="GOA:B7FDD0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B7FDD0" FT /protein_id="CAP58247.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQYALDSLRTLLAKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNIGMNTSPFSFFHPNIQAAKDCNQVR FT DYIMKEVDSDVNTAEWGTFVAVTTPGRKDRDADMKQIIESSTSREEFLSMVCHRFPFEW FT SIRLKGFEYTARHLFPDPVSTYTPEFPIESLMCHETIESWKNDHLYSESPGRHKSIYIC FT GPTRTGKTSWARSLGIHNYYNSLVDFTTYDVNAKYNIIDDIPFKFTPNWKCFVGAQRDF FT TVNPKYGKRKMIRGGIPCIILVNPDEDWLKDMTPEQSDYMYSNAVIHYMYEGESFFAFG FT ENVTASQ" FT exon complement(1369..1782) FT /gene="rep" FT /number=2 FT CDS complement(1704..2498) FT /gene="repA" FT /product="replication associated protein a" FT /db_xref="GOA:B7FDD1" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B7FDD1" FT /protein_id="CAP58248.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQYALDSLRTLLAKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNIGMNTSPFSFFHPNIQAAKDCNQVR FT DYIMKEVDSDVNTAEWGTFVAVTTPGRKDRDADMKQIIESSTSREEFLSMVCHRFPFEW FT SIRLKGFEYTARHLFPDPVSTYTPEFPIESLMCHETIESWKNDHLYSVSLESYILCTST FT PADKAVTDLEWMDDYSRSHREGISPYTSAVRQEQERLPGQDL" FT intron complement(1783..1868) FT /gene="rep" FT /number=1 FT exon complement(1869..2498) FT /gene="rep" FT /number=1 XX SQ Sequence 2733 BP; 693 A; 597 C; 744 G; 699 T; 0 other; accctgcgtg gtgggtccga ggcgcactcg gcttttcgtg agtgcgccga ggattttgga 60 ccacgtcttt atgtcatcac atcaattatt gttggtgagt catcacatat tccacctgca 120 attatgtgcc atcgcttagc ttataaggaa gtgtcgggga aggtttctcg atggatcagg 180 tctttacacc gccgcgttct atacgggcag atcaatacca ggccccttac gatcccgggt 240 cctccgacta cgcctggcgg acctttgtgt tcgtctcctt cggtttgtta atatccgtag 300 gagttgtttg gttggcttac actctgttct tgaaggactg catattagtg tggaaggcga 360 agaagcagag gaggaccgag gaaattggtt acggtaatac accggccaga ccaaatggtg 420 accaacaagg actcccgagg taagggaaag aggaagctcg aggagggcga atcgagtgga 480 aggtggaagg ggcaagtgta taagcggcgt aagcagacct acaaggtagt acctgtgagg 540 ccacccgccc tgtgtgtgta tcggtataac tggctcaatt cagacaagac caatatcgtg 600 gtgggtaaca cccctcggat tgatctgatt acctgctttg cagcgggcaa ggccgataat 660 aatcggcata caaatcagac catcctctac aagtttaacc tacaggggac ctgttacgtg 720 tcggactcct catgtatgtt cataacccca atcagggttt atcactggtt ggtctatgat 780 gcagagccga agcaggctac gcctgactcc actgacatct ttacgatgcc ttggaatctg 840 ctgccgagtt catggactgt gcagagggct tggtcgcatc ggttcgtggt gaagaggaag 900 tggtgcgtga acctggtctc cgatggaagg aaggttggat ccaagacggt ggactcccgc 960 tacaactacg tagtggggaa gaatatcgtt gacgcctcca agttcgtgaa gggtttgcgc 1020 gtgacgacgg agtggatgaa cacgggtgac ggcaagatag gcgatattaa gaagggtgcc 1080 ctgtatctag taacctgtac tcgtggaggt atcactggag acagtgcctc catttcattc 1140 gaagttgtat gtgcctatac gcacgcgtgt tacttcaaat ccattgggat tcaataaata 1200 aaatagtatt ttattcatct catgtcattc gattacagat gctcggctac gagcaaagat 1260 aaaccaaact atgacataca acacactcat aaccaaaaca tcgaaaaaag aaatacaagg 1320 ggcgagatca cacaatttta gaaaccgtag ccgtccgcgc taggacagtc actgcgaagc 1380 agtgacattt tcgccgaagg cgaagaatga ttcaccctca tacatataat gtatcacagc 1440 gttagagtac atgtaatccg actgttcagg agtcatatcc ttgagccaat cttcgtctgg 1500 gttaactaaa atgatgcaag gtataccacc ccgtatcatt tttcgcttcc cgtacttagg 1560 attgacggtg aagtcacgct gagccccgac gaagcacttc cagtttggcg tgaacttgaa 1620 tggaatgtcg tcaattatgt tgtacttggc gttgacgtca taggtcgtga aatcaactag 1680 gctgttgtag tagttgtgga tccctagaga tcttgcccag gaagtctttc ctgttcttgt 1740 cggaccgcag atgtatatgg acttatgcct tcccggtgac tcctggaata atcgtccatc 1800 cactctaaat cagttacggc cttatccgca ggagtggaag tacaaaggat gtatgattcg 1860 aggcttacgg agtagagatg atcatttttc cagctttcaa tggtctcatg acacatgagg 1920 gactcgatgg gaaactcagg tgtgtaagtg ctaactgggt ctgggaatag gtggcgtgca 1980 gtgtattcga agcctttgag acggatagac cattcaaacg gaaaacgatg gcagaccatg 2040 ctgagaaatt cctctctcga ggtactcgac tcaatgatct gtttcatatc cgcgtctcgg 2100 tctttacgac ccggagtggt aactgctacg aatgttcccc actcagccgt gttgacatcg 2160 gagtcaacct ccttcatgat gtaatcacga acttggttgc agtctttggc agcttgaatg 2220 ttaggatgaa aaaatgaaaa tggtgatgtg ttcataccaa tgttgagagc attgggattg 2280 gtgatggaag cacgaagctt gttttgcacg agtacgtgca gatgtggtga tccatcttcg 2340 tggagttccc taactgcagc tatgtacaga ggttcatatt tggccaagag agtgcgaaga 2400 gagtccaagg cgtactgtgg ctctaggatg cattgaggat atgttaggaa gaggtatttg 2460 gaatagacac ggaacctggg tgcagatgaa gaggccatag tagcaagcag aagcccggca 2520 ggtccttagc gaaaaaacgg ggtgtgctcg cgaactctac tctctaccct gcgtgggagt 2580 gtgcagaatt cacaccgatg ggctcggtgt ccacggttta aatattgcag gtttaggtgg 2640 gaacgcggga ccctgtcttt tcggcgcgaa agcgactggt ggtcccgcgt gtggtttgtg 2700 gctcggggac ccgccacgca ggaatctaat att 2733 //