ID AM920542; SV 1; linear; genomic RNA; STD; VRL; 3035 BP. XX AC AM920542; XX DT 05-DEC-2007 (Rel. 94, Created) DT 05-DEC-2007 (Rel. 94, Last updated, Version 1) XX DE Phlomis mottle virus RdRpol gene (partial), MP gene, CP gene and ORF4, DE genomic RNA XX KW . XX OS Phlomis mottle virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-3035 RA Saldarelli P.; RT ; RL Submitted (30-NOV-2007) to the INSDC. RL Saldarelli P., Sezione di Bari, Istituto di Virologia Vegetale del CNR, via RL Amendola 165/A Bari, 70126, ITALY. XX RN [2] RA Saldarelli P., Boscia D., De Stradis A., Vovlas M., Martelli G.P.; RT "Molecular analysis of Phlomis mottle virus"; RL Unpublished. XX DR MD5; 127fe6d4ddba64e7d09139e7704fb3ce. XX FH Key Location/Qualifiers FH FT source 1..3035 FT /organism="Phlomis mottle virus" FT /mol_type="genomic RNA" FT /country="Greece:Epirus" FT /db_xref="taxon:487095" FT CDS <1..822 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRpol" FT /product="replicase domain" FT /function="genome replication" FT /db_xref="GOA:A9JQJ5" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:A9JQJ5" FT /protein_id="CAP46903.1" FT /translation="AKAGQTLACFAHDVLIEFSPYCRYIEKKVSEVLPRNFYIHQRKNF FT DQLNSFCLEFMRGDQVCVESDYEAFDASQDCNMLAFEVNLMRYLSLPEHIVDKYIFLKT FT NLRSKLGDFATMRFTGEFCTFLFNTLSNMVFTFLRYKVRGDEPICFAGDDMCAFRNLEK FT RHEMEFVLDKLSLTAKVNRTEHPTFCGWFMTKFGIVKHPCLILDRLGIAIEKNKLDLVL FT DSYCLEFTYAYQLGEKLFEVLNEKLLESQQILQRFFLLNRKRLKGESRLVF" FT CDS 843..1892 FT /transl_table=1 FT /gene="MP" FT /product="movement protein" FT /db_xref="GOA:A9JQJ6" FT /db_xref="InterPro:IPR001815" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:A9JQJ6" FT /protein_id="CAP46904.1" FT /translation="MTMIAKRAQFLKGDSEDLTLNVSKSKIYSDVSPFVSDSSVNVHRS FT ESIFVCDFERSFDGLKLADVPLIPEVILSGYKSIGKFNYVHLASISIIINALFKHKSGV FT KGSFVLYDGRFTNAKQACISAFKFNLDSGTAYQVLHPNFPVSLSDPFLEKALTGLIVFE FT DLNMLEGTHSVSLVVGVMLGPLTLSLQELTLSQVHNISDSYCAEIEYLIIEIQLMKGSQ FT QFDVLDAEAAVEKKSVSTIEVGQGLLEAFPGPKRHLQKMVYKSRKRADLIEPKLQVDEC FT DKDKEEGNGKGKGVNLLKAAKNGAHSELFLKGSRGASKKGGCHHEIQQGDGSVEQGFER FT GRGEGKGLH" FT CDS 1750..2385 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:A9JQJ7" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:A9JQJ7" FT /protein_id="CAP46905.1" FT /translation="MEHIVNFSSKDQEEQARRGAVITRFNREMGPLNKDSREGEEKGKD FT FTDEEAGVILQYIFGNIALYGTSINTVFLPTKIICKRYVDEPTSKTLITFKLDTVAAMI FT RSVSDESTDPLVDGSTFRQLCTPFAVEARRFLVHMERVGVFTNLYVNHPVKCADAPQVA FT YDFNSGLHFRGLTKAERKVVEELNKIVNIAGRSDRLLELAASRVESGI" FT CDS <2427..2858 FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF4" FT /note="putative RNA binding protein" FT /db_xref="InterPro:IPR008891" FT /db_xref="UniProtKB/TrEMBL:A9JQJ8" FT /protein_id="CAP46906.1" FT /translation="DSKPSSLLPGDIKELEALCDLLCFLKVDFCNRGLPTEISSGIVNP FT IINEVRKTGRQEEQRARRYNGTSRSAIKRRSSILGHCRKCGKLSHEGACSANQTRSNSE FT FYEIIHMGTNRWLTENVRYMRKGSYVRDATLSLINRASQ" FT 3'UTR 2859..3035 XX SQ Sequence 3035 BP; 914 A; 533 C; 727 G; 861 T; 0 other; gcgaaggcgg ggcagaccct cgcttgtttt gctcatgatg tcctcataga attttcaccc 60 tactgcagat acatagaaaa gaaggtctct gaagttttac ccaggaactt ctatatacac 120 cagaggaaaa acttcgatca gcttaactcc ttttgtcttg aatttatgag gggtgaccag 180 gtgtgtgtgg agtcggacta tgaagccttt gatgcatctc aggattgcaa tatgctggct 240 ttcgaggtca atttgatgag atacctctct cttccagagc acatagtgga taagtacatc 300 ttcctgaaga cgaatttaag gagcaaattg ggagactttg caacgatgcg atttactggg 360 gaattctgta cctttctgtt caacacttta tccaatatgg tgtttacctt cttgaggtac 420 aaagttagag gggatgaacc aatttgcttt gctggagatg atatgtgcgc ttttagaaat 480 ttggaaaaga ggcacgagat ggaattcgta cttgacaagt tgagtttgac tgccaaagtt 540 aaccgaaccg agcatcctac cttctgcggg tggttcatga ccaagttcgg gatagtcaaa 600 catccatgcc tgatattgga tagacttgga attgccattg aaaaaaacaa gttggatttg 660 gttcttgact catactgcct tgaattcacg tatgcatatc agctaggcga aaagctgttt 720 gaagtcttga atgaaaaact gctggaaagc caacagatcc tgcaaagatt tttcctccta 780 aataggaaga ggttgaaagg tgagtcacgt ctggtttttt gaggagaact tgtacattag 840 tgatgacgat gattgcgaag agggcccagt ttctgaaagg ggattcagag gatcttactc 900 tgaacgtgtc gaaatcaaaa atctattctg atgtctcccc ctttgtgagt gattctagtg 960 tgaatgtaca taggtctgag tcaatttttg tctgcgattt cgagaggtct tttgatggtt 1020 tgaagttagc tgatgtacct cttatccctg aggtcatact tagcggttat aagtctatag 1080 gtaagttcaa ttatgtgcat ttagctagca tttcaattat aataaacgca ctttttaagc 1140 ataagtcagg tgtcaagggt agctttgtgc tgtatgatgg taggttcact aatgcgaaac 1200 aagcctgcat cagtgctttc aagtttaatc tagattcagg cacggcctac caagttcttc 1260 atccaaattt ccccgtttca ttgagtgacc ccttccttga aaaggcttta acgggtctca 1320 ttgtgtttga agatttgaac atgcttgaag gtacccattc tgtgagccta gttgttggag 1380 tcatgttagg gcctttgact ctttccttgc aagagttaac cttaagccag gtgcacaaca 1440 tttcagatag ctactgtgct gaaatagagt acttgataat cgaaatccaa ctcatgaaag 1500 gatctcaaca atttgatgtg ctagatgctg aagctgccgt tgagaagaag tcagtaagta 1560 cgatcgaagt ggggcaaggc ttactagaag catttcccgg gccaaaaaga cacttacaaa 1620 aaatggtcta caaaagtcgg aagagggcag atttaattga acctaagctt caggttgatg 1680 agtgtgataa agataaagaa gaaggaaacg gaaaagggaa aggcgtcaac cttctgaaag 1740 cagccaaaaa tggagcacat agtgaacttt tcctcaaagg atcaagagga gcaagcaaga 1800 aggggggctg tcatcacgag attcaacagg gagatgggtc cgttgaacaa ggattcgaga 1860 gagggagagg agaagggaaa ggacttcact gatgaggaag ctggtgtaat cttgcagtat 1920 atttttggaa atatagcact gtatggcacg tccatcaata ctgtgtttct ccctacaaag 1980 ataatctgca agaggtatgt cgacgagcca acaagtaaga cccttataac ttttaaatta 2040 gatactgtag cagctatgat aagatcagtg agtgacgaat caactgaccc gttagtggat 2100 ggtagcactt ttagacagct ttgcacaccc tttgccgtgg aggcaagaag gtttttggtt 2160 catatggaga gggttggtgt tttcactaat ctttatgtga atcaccctgt caagtgtgca 2220 gatgctccgc aggtagcata tgatttcaac tcaggcttac atttcagagg gttgaccaaa 2280 gctgaaagga aagtggtaga ggagttaaat aagatagtca acatagctgg aaggtcagat 2340 cgattgctgg agcttgcagc ctcaagggtt gagtctggaa tctgaaggct agttaaactg 2400 tgtgacaact tagtgatagg tattaggact ctaaaccttc tagtctttta ccgggagaca 2460 ttaaagaact ggaagctttg tgtgatttac tgtgctttct taaagtagac ttttgcaata 2520 gaggtttgcc tacagaaatc tcgtcgggaa tagtcaaccc gattatcaat gaggtgagga 2580 aaacaggccg ccaagaggaa caaagggccc gaagatataa tggcacatcc agatctgcaa 2640 ttaaaagaag atcttcaatt cttggacatt gcagaaagtg tggtaaacta tcacatgaag 2700 gtgcgtgctc agcaaatcag acaagaagta actctgaatt ttacgaaatc atacacatgg 2760 gcacgaatag gtggttgacc gaaaatgtcc gatatatgcg caaaggttcg tatgtaagag 2820 atgctacttt gtcattgatc aatagagcaa gtcaatagtc ctggtgatct gactataaaa 2880 gagccaatct ttaatatgta aattaattaa gttggtgaac ttaaaatcac acaaggctag 2940 tggcacagcc tcctttgaaa gataaggttt agtgctacac tcgtatttta ataacttaaa 3000 tattatagcg agtgtgtttt aatatattta cacag 3035 //