ID AM900416; SV 1; circular; genomic DNA; STD; VRL; 2583 BP. XX AC AM900416; XX DT 17-JUL-2008 (Rel. 96, Created) DT 17-JUL-2008 (Rel. 96, Last updated, Version 1) XX DE Chickpea chlorotic dwarf virus, complete genome, clone CCDV8 XX KW C1 gene; C2 gene; C2 protein; coat protein; complete genome; KW movement protein; Rep A protein; V1 gene; V2 gene. XX OS Chickpea chlorotic dwarf virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2583 RA Nahid N.; RT ; RL Submitted (11-OCT-2007) to the INSDC. RL Nahid N., Plant Biotechnology Division, NIBGE, Jhang Road Faisalabad, P.O. RL Box 577, 38000, PAKISTAN. XX RN [2] RX DOI; 10.1007/s00705-008-0133-7. RX PUBMED; 18566736. RA Nahid N., Amin I., Mansoor S., Rybicki E.P., van der Walt E., Briddon R.W.; RT "Two dicot-infecting mastreviruses (family Geminiviridae) occur in RT Pakistan"; RL Arch. Virol. 153(8):1441-1451(2008). XX DR MD5; 3409951f192a871149563aff6c36b055. DR EuropePMC; PMC4585055; 26436119. XX FH Key Location/Qualifiers FH FT source 1..2583 FT /organism="Chickpea chlorotic dwarf virus" FT /mol_type="genomic DNA" FT /country="Pakistan:Layyah" FT /collection_date="2007" FT /clone="CCDV8" FT /tissue_type="leaf" FT /db_xref="taxon:463360" FT CDS 132..410 FT /gene="V1" FT /product="movement protein" FT /db_xref="GOA:B4ERB7" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B4ERB7" FT /protein_id="CAP12615.1" FT /translation="MERILYQVFPTDTNYSYDPPPVNTNSQGSSQTDFGKVVIALVVIL FT VSVGVFYLAYSLFLKDCILLFKAKKQRTTTEIGFGQTPARNQDHPQP" FT CDS 423..1160 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:B4ERB8" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B4ERB8" FT /protein_id="CAP12616.1" FT /translation="MSTVTWGNKRKRSDRSSKAKSKSSGSYVPRSVSSRRESLQVATFS FT WTSSGSGIKFSTGGAAYLVSNFPQGANDNCRHTNKTVLYKFMAKNTVYLDPSHYPKVFK FT CPFTFWLVYDKAPGASVPSTGDIFEGPSLFPANPWTWTVSRAACHRFVVKKTWSVVVES FT NGVDPGKAQSSSYYGPGPCNQIKSCNKFFKRLGVSTEWKNSSTGDVGDIKEGALYIVGA FT PSQKSDVYVNGYFRVYFKSVGNQ" FT CDS complement(1317..1751) FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:B4ERK1" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B4ERK1" FT /protein_id="CAP12617.1" FT /translation="MDGRSNQEPRRPGARVPSLYICGPTRTGKTTWARSLGRHNYWNGT FT IDFTTYDEHATYNVIDDIPFKFVPLWKQLIGCQFDFTVNPKYGKKKKIKGGVPSIILTN FT RDEDWIPAMSEHQKEYFTDNCEIHYMDDGETFFARESSSH" FT CDS complement(2330..2407) FT /gene="C1" FT /product="truncated Rep A protein" FT /function="replication initiation" FT /db_xref="UniProtKB/TrEMBL:B4ERK2" FT /protein_id="CAP12618.1" FT /translation="MPSANKNFRFQSKYVFLTYPKCSSQ" XX SQ Sequence 2583 BP; 664 A; 514 C; 650 G; 755 T; 0 other; accggcgtgg cccaccttat cgcgagcact ttagtgcgag cggttcagat ttaaagtgga 60 aaagttcccg cccactaggg tttgctttag cttttgcttt ataaaaggcg cactaatggg 120 tagaccgtag aatggaacgt attctgtatc aggtatttcc tacggatacg aattattcgt 180 acgatcctcc tcctgtgaat acgaattccc agggatcctc tcaaacggat ttcgggaagg 240 tggttatcgc cttggtggtt attctggtta gtgttggtgt gttctatctg gcgtatagtc 300 tgttcttgaa ggattgtatc cttctgttca aggcgaagaa gcagaggacc accactgaaa 360 tcgggtttgg tcaaacccct gctagaaacc aggatcatcc tcaaccttag gcggggtgca 420 tcatgtcaac tgtgacgtgg ggaaacaaga ggaagcgcag cgataggtcc tcgaaggcga 480 agagtaagtc ctctgggtct tatgtgccta gatctgtgtc ctccaggagg gaatcgttgc 540 aggtggctac cttttcctgg accagttctg gttcgggtat caagttctct actggtggtg 600 ctgcctacct tgtgagtaat tttccacagg gtgccaacga taactgtcgt cacaccaaca 660 agaccgtgct atacaaattc atggccaaga atacggtgta cttggaccct agtcattatc 720 ctaaggtctt taagtgcccg ttcacttttt ggctggtgta cgacaaggct cctggtgcaa 780 gtgttcctag tactggggac atatttgaag gtccctctct attccctgct aatccctgga 840 cgtggactgt gtctagggct gcctgccatc gttttgttgt caaaaaaacg tggtcagtgg 900 tggtggagag caatggtgtt gatccaggaa aggcccaatc cagttcttat tatgggcctg 960 gaccttgtaa tcagattaag tcctgcaata agttctttaa gaggctgggt gtgtcaacgg 1020 agtggaaaaa tagttccacg ggggatgttg gtgatataaa ggaaggagcc ctttacattg 1080 taggtgctcc ttcccagaag tctgatgtat atgtaaatgg ttatttccga gtgtacttca 1140 agtccgttgg caatcaataa aaatttatta ttatgaatat tttacattgt gcaagtaggt 1200 agaaattcaa tatgttacat tacacacgaa atgagcaaaa aaaacacacc taaaacaaaa 1260 gtacactacc cacgataata taactatagc ttaaccccgt atgaggagag gcacgttcag 1320 tgactcgacg attcccgggc aaaaaaagtt tcgccgtcat ccatataatg gatctcacaa 1380 ttgtctgtaa agtattcttt ctgatgctca gacatagcag gaatccagtc ctcatctcta 1440 tttgttaaaa ttattgaagg gacaccacct tttattttct tcttttttcc atacttaggg 1500 ttgacagtga agtcgaactg gcaacctatt aattgcttcc acaatgggac gaacttgaac 1560 gggatgtcgt caatgacatt gtaggtcgcg tgttcgtcgt acgtggtgaa gtcgatggtc 1620 ccattccagt agttgtgtcg tccgaggctt ctagcccagg tggtctttcc ggtacgagtt 1680 ggtccgcaga tgtagaggct ggggactcta gctccaggcc ttctcggttc ctggttagat 1740 cggccatcca ttcaaggtca gattgagctt gctgatatga aactggatgg acaagagtgt 1800 aggcgtcgat gcttacttgg tacaggtgtg tatccctcca ttgtgctaga tcctcatggc 1860 agcggagatc tgactcagtg aacggcgaca catatgcttc aggttgtgga gggaatagct 1920 tgtttgcgga gtattcaagc cattgaagct tggttgccca ttcatgtggg aactcctcct 1980 tgatcatgtc aagatattcc tccttagacg ttgcagtctg gataatagtt cgccatcgtg 2040 cgtcagattt gcggggagag actttatgat ctctgaaatc tcctcttgtt ttaatatctc 2100 cgtccttgga tatgtattca aggacttgtt tagagtttct agctggctgg atattagggt 2160 gatttccttc aaaatcgaaa aaagaaggat ccctaatcca aggtttttta tcaagctgga 2220 taagagcatg atagtgggta gtgccatctt gatgaagctc agtagcaaca gcaaggaaga 2280 aaataagaaa aggtgtgagt ttctcccaga gaaactcgaa taaatcatct cattgagatg 2340 agcatttagg gtaggtaagg aaaacatatt ttgattggaa tctgaagttc ttgtttgcag 2400 aaggcatgtt tgttgtgact ccaagggttg gcttgaaact ctatcttata accggcgtgg 2460 agacttggag acaagggtat ttttgtcatt taggctgggt agtggaataa tgacatggca 2520 atgacttaaa gacgaagtct ttgcggaagc gaataaaggt ggagccacgc cgaaattaat 2580 att 2583 //