ID   AM850140; SV 1; linear; genomic RNA; STD; VRL; 1169 BP.
XX
AC   AM850140;
XX
DT   11-SEP-2007 (Rel. 93, Created)
DT   11-SEP-2007 (Rel. 93, Last updated, Version 1)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate
DE   India
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1169
RA   Sharma T.;
RT   ;
RL   Submitted (30-AUG-2007) to the INSDC.
RL   Sharma T., Biotechnology, Dr. Y.S. Parmar Uni. of Hort. & Forestry, Nauni,
RL   Solan, Himachal Pradesh, 173230, INDIA.
XX
RN   [2]
RA   Sharma T., Bhardwaj S.V., Kumar Y., Singh A.K., Zaidi A.A., Handa A.;
RT   "Molecular characterization of a potyvirus infecting radish (Raphanus
RT   Sativus L.) in Himachal Pradesh";
RL   Unpublished.
XX
DR   MD5; b3bb0cb0b47f95f190c3c25125aa539f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1169
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="India"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Rohru Himachal Pradesh"
FT                   /isolation_source="Raphanus sativus leaf"
FT                   /collected_by="Taruna Sharma"
FT                   /collection_date="25-May-2007"
FT                   /identified_by="Taruna Sharma"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..962
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A7WPI7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:A7WPI7"
FT                   /protein_id="CAO98860.1"
FT                   /translation="DKEPAQEDLTQYLQAIFEDYEDGAEVCVYHQAGETLDAGLTEEQK
FT                   QAEKEKKERERSEKERERQRQLALKKGKNAAQEEGERDNEVNVGTSGTFSVPRLKSLTS
FT                   KMRVPKYEKRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQII
FT                   LNGLMVWCIENGTSPNINGMWVMMDGDDQVEFPIKPLIVHAKPPFRQIMAHFSDVVEAY
FT                   IEKRTQDRPYMPRYGLQRNLTDMSLARYAFDFYEMSSRTPIRAREPPIQMKAAALGGAN
FT                   NNLFGLDGKVGTTVENTERHTTEDVNRNMHNLLGVKGL"
FT   mat_peptide     <1..95
FT                   /product="NIb protein"
FT   mat_peptide     96..959
FT                   /product="coat protein"
FT   3'UTR           963..>1169
XX
SQ   Sequence 1169 BP; 360 A; 224 C; 296 G; 289 T; 0 other;
     ttgacaagga accagctcaa gaagatctta ctcaatactt acaggcaatc ttcgaagatt        60
     atgaagatgg tgctgaagtt tgcgtttatc accaggcagg tgagacgctt gatgccggtt       120
     taacagaaga gcagaagcaa gctgagaagg agaaaaagga gagagagaga tcagagaaag       180
     agcgagaaag gcaaagacag ctagcgctta agaaaggcaa aaacgcagca caagaagaag       240
     gcgaacgtga caatgaggta aatgtcggaa cttccggaac ttttagcgtg cctagactca       300
     aaagtcttac aagcaaaatg cgtgtgccga agtatgagaa aagagttgct ctcaacctcg       360
     atcatttgat cttatacacg ccggagcaga cagatttatc caacacgcgt tcaacgcgga       420
     aacagtttga cacttggttt gaaggtgtca tggctgacta tgagctaacg gaggataaaa       480
     tgcaaataat tctcaatggt ttaatggtct ggtgcattga gaatggaacc tccccgaaca       540
     taaacggaat gtgggtgatg atggacggtg atgatcaggt ggaattcccg atcaagccgc       600
     tcattgtcca cgccaaaccc ccatttaggc aaataatggc ccatttcagt gacgtagttg       660
     aagcgtacat tgaaaagcgt acccaggacc gaccatacat gccacgatat ggtcttcagc       720
     gcaatttaac cgacatgagc ttagctcgtt acgcgtttga tttctacgaa atgtcttcta       780
     gaactccaat acgtgcgaga gagccaccca tccagatgaa agcagcagcc ctgggtggcg       840
     caaataataa tttgttcggc ttggatggta aggtcggcac aacggtagag aacacggaaa       900
     ggcatacgac cgaagacgtt aatcggaaca tgcataactt acttggcgtt aaggggttat       960
     gaagttgtat cctagtagac tataagtagt taagtttact cgttagtatt ctcgcttatg      1020
     ggaaatatgt aagtttgtta aagcagccag tgtgacttcg tcatgtgtgt tgttgttcct      1080
     ttttatattt tcgccgaact ttttattggt gttagcgcat gtggtgagat actatctcga      1140
     ttgccttaac atttgatagg aagcaaggg                                        1169
//