ID AM850136; SV 1; circular; genomic DNA; STD; VRL; 2584 BP. XX AC AM850136; XX DT 17-JUL-2008 (Rel. 96, Created) DT 17-JUL-2008 (Rel. 96, Last updated, Version 1) XX DE Chickpea chlorotic dwarf virus, complete genome, clone ccdv 3 XX KW C1 gene; V1 gene; V2 gene; C1:C2 gene; Rep protein; coat protein; KW Rep A protein; complete genome; movement protein. XX OS Chickpea chlorotic dwarf virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2584 RA Nahid N.; RT ; RL Submitted (31-AUG-2007) to the INSDC. RL Nahid N., Plant Biotechnology Division, NIBGE, Jhang Road Faisalabad, P.O. RL Box 577, 38000, PAKISTAN. XX RN [2] RA Nahid N., Amin I., Mansoor S., Rybicki E.P., van der Walt E., Briddon R.W.; RT "Two dicot-infecting mastreviruses (family Geminiviridae) occur in RT Pakistan"; RL Arch. Virol. 153(8):1441-1451(2008). XX DR MD5; 0704c7564655576794988c891451c7c9. XX FH Key Location/Qualifiers FH FT source 1..2584 FT /organism="Chickpea chlorotic dwarf virus" FT /host="Cicer arietinum" FT /mol_type="genomic DNA" FT /country="Pakistan:Layyah" FT /collection_date="2007" FT /clone="ccdv 3" FT /tissue_type="Leaf" FT /db_xref="taxon:463360" FT CDS 132..410 FT /gene="V1" FT /product="movement protein" FT /db_xref="GOA:B4ERB7" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:B4ERB7" FT /protein_id="CAO98854.1" FT /translation="MERILYQVFPTDTNYSYDPPPVNTNSQGSSQTDFGKVVIALVVIL FT VSVGVFYLAYSLFLKDCILLFKAKKQRTTTEIGFGQTPARNQDHPQP" FT CDS 423..1160 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:B4ERB8" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B4ERB8" FT /protein_id="CAO98855.1" FT /translation="MSTVTWGNKRKRSDRSSKAKSKSSGSYVPRSVSSRRESLQVATFS FT WTSSGSGIKFSTGGAAYLVSNFPQGANDNCRHTNKTVLYKFMAKNTVYLDPSHYPKVFK FT CPFTFWLVYDKAPGASVPSTGDIFEGPSLFPANPWTWTVSRAACHRFVVKKTWSVVVES FT NGVDPGKAQSSSYYGPGPCNQIKSCNKFFKRLGVSTEWKNSSTGDVGDIKEGALYIVGA FT PSQKSDVYVNGYFRVYFKSVGNQ" FT CDS complement(join(1318..1731,1818..2408)) FT /gene="C1:C2" FT /product="Rep A protein" FT /db_xref="GOA:B4ERB9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:B4ERB9" FT /protein_id="CAO98856.1" FT /translation="MPSANKNFRFQSKYVFLTYPKCSSPRDDLFEFLWEKLTPFLIFFL FT GVATELHQDGTTHYHALVQLDKKPWIRDPSFFDFEGNHPNIQPARNSKQVLEYISKDGD FT IKTRGDFRDHKVSPRKSDARWRTIIQTATSKEEYLDMIKEEFPHEWTTKLQWLEYSANK FT LFPPQPEAYVSPFTESDLRCHEDLAQWRDTHLYQEPRRTGARVPSLYICGPTRTGKTTW FT ARSLGRHNYWNGTIDFTTYDEHATYNVIDDIPFKFVPLWKQLIGCQFDFTVNPKYGKKK FT KIKGGVPSIILTNRDEDWIPAMSEHQKEYFTDNCEIHYMDDGETFFARESSSH" FT exon complement(1318..1731) FT /gene="C1:C2" FT /number=2 FT CDS complement(1530..2408) FT /gene="C1" FT /product="Rep protein" FT /db_xref="GOA:B4ERC0" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B4ERC0" FT /protein_id="CAO98857.1" FT /translation="MPSANKNFRFQSKYVFLTYPKCSSPRDDLFEFLWEKLTPFLIFFL FT GVATELHQDGTTHYHALVQLDKKPWIRDPSFFDFEGNHPNIQPARNSKQVLEYISKDGD FT IKTRGDFRDHKVSPRKSDARWRTIIQTATSKEEYLDMIKEEFPHEWTTKLQWLEYSANK FT LFPPQPEAYVSPFTESDLRCHEDLAQWRDTHLYQVSIDAYTLVHPVSYQQAQSDLEWMA FT DLTRNREGLELESPASTSADQLVPERPPGLEASDDTTTGMGPSTSPRTTNTRPTMSLTT FT SPSSSSHCGSN" FT intron complement(1732..1817) FT /gene="C1:C2" FT /number=1 FT exon complement(1818..2408) FT /gene="C1:C2" FT /number=1 XX SQ Sequence 2584 BP; 665 A; 514 C; 653 G; 752 T; 0 other; accggcgtgg cccaccttat cgcgagcact ttagtgcgag cggttcagat ttaaagtgga 60 aaagttcccg cccactaggg tttgctttag cttttgcttt ataaaaggcg cactaatggg 120 tagaccgtag aatggaacgt attctgtatc aggtatttcc tacggatacg aattattcgt 180 acgatcctcc tcctgtgaat acgaattccc agggatcctc tcaaacggat ttcgggaagg 240 tggttatcgc cttggtggtt attctggtta gtgttggtgt gttctatctg gcttatagtc 300 tgttcttgaa ggattgtatc cttctgttca aggcgaagaa gcagaggacc accactgaaa 360 tcgggtttgg tcaaaccccg gctagaaacc aggatcatcc tcaaccttag gcggggtgca 420 tcatgtcaac tgtgacgtgg ggaaacaaga ggaagcgcag cgataggtcc tcgaaggcga 480 agagtaagtc ctctgggtct tatgttccca gatctgtgtc ttccaggagg gaatcgttgc 540 aggtggctac cttttcctgg accagttctg gttcgggtat caagttctct actggtggtg 600 ctgcctacct tgtgagtaat tttccacagg gtgccaacga taactgtcgt cacaccaaca 660 agaccgtgct atacaaattc atggccaaga atacggtgta cttggaccct agtcattatc 720 ctaaggtctt taagtgcccg tttacttttt ggctggtgta cgacaaggct cctggtgcaa 780 gtgtccctag tactggggac atatttgaag gcccctctct attccctgct aatccctgga 840 cgtggactgt gtctagggct gcttgccatc gatttgttgt taaaaaaacg tggtcagtgg 900 tggtggagag caatggtgtt gatccaggaa aggcccaatc cagttcctat tatgggcctg 960 gaccttgtaa tcagattaag tcctgcaata agttctttaa gaggctgggt gtgtcaacgg 1020 agtggaaaaa tagttccacg ggggatgttg gtgatataaa ggaaggagcc ctttacattg 1080 taggtgctcc ttcccagaag tctgatgtat atgtaaatgg ttatttccga gtgtacttca 1140 agtccgttgg caatcaataa aaatttatta ttatgaatat tttacattgt gcaagtaggt 1200 agaaattcaa tatgttacat tacacacgaa ataagcaaaa aaacacacct aaaacaaaag 1260 tacactaccc acgataactt ataactatag cttaaccccg tatgaggaga ggcacgttca 1320 gtgactcgac gattcccggg caaaaaaagt ttcgccgtca tccatataat ggatctcaca 1380 attgtctgta aagtattctt tctgatgctc agacatagca gggatccagt cctcatctct 1440 atttgttaaa attatggaag ggacaccacc ttttattttc ttcttttttc catacttagg 1500 gttgacagtg aagtcgaact ggcaacctat taattgcttc cacaatggga cgaacttgaa 1560 ggggatgtcg tcaatgacat tgtaggtcgc gtgttcgtcg tacgtggtga agtcgatggt 1620 cccattccag tagttgtgtc gtccgaggct tctagcccag gtggtctttc cggtacgagt 1680 tggtccgcag atgtagaggc tggggactct agctccagtc cttctcggtt cctggttaga 1740 tcggccatcc attcaaggtc agattgagct tgctgatatg aaactggatg gacaagagtg 1800 taggcgtcga tgcttacttg gtacaggtgt gtatccctcc attgtgctag atcctcgtgg 1860 cagcggagat ctgactcagt gaacggcgac acatatgctt caggttgtgg agggaatagc 1920 ttgtttgcgg agtattcaag ccattgaagc ttggtagtcc attcatgggg gaactcctcc 1980 ttgatcatgt caagatattc ctccttagac gttgcagtct ggataatagt tcgccatcgt 2040 gcgtcagatt tgcgaggaga gactttatga tctctgaaat ctcctcttgt tttaatatct 2100 ccgtccttgg aaatgtattc aaggacttgt ttagagtttc tagctggttg gatattaggg 2160 tgatttcctt caaaatcgaa aaaagaagga tccctaatcc aaggtttttt atcaagctgg 2220 acaagagcat gatagtgggt agtgccatct tgatgaagct cagtagcaac accaaggaag 2280 aaaataagaa aaggtgtgag tttctcccag agaaactcga ataaatcatc tcttggagat 2340 gagcatttag ggtaggtaag gaaaacatat tttgattgga atctgaagtt cttgtttgca 2400 gaaggcatat ttgttgtgac tccaagggtt ggcttgaaac tctatcttat aaccggcgtg 2460 gagacttgga gacaagggta ttttggtcat ttaggctggg tagtggaata atgacatggc 2520 agtgacttaa agacgaagtc tttgcgaaag cgaataaggg gggagccacg ccgaaattaa 2580 tatt 2584 //