ID AM778833; SV 1; circular; genomic DNA; STD; VRL; 2800 BP. XX AC AM778833; XX DT 07-JAN-2010 (Rel. 103, Created) DT 07-JAN-2010 (Rel. 103, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus segment DNA-B, complete sequence XX KW movement protein; MP gene; NSP gene; nuclear shuttle protein. XX OS Tomato leaf curl New Delhi virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2800 RA Tahir M.; RT ; RL Submitted (12-AUG-2007) to the INSDC. RL Tahir M., School of Biological Sciences, University of The Punjab, School RL of Biological Sciences, University of The Punjab, Lahore Pakistan, 54590, RL PAKISTAN. XX RN [2] RA Tahir M., Haider M.S., Briddon R.W.; RT "Diversity of begomoviruses in Punjab Pakistan"; RL Unpublished. XX DR MD5; 1475ca5142d203ddc1b9271af69edcf7. XX FH Key Location/Qualifiers FH FT source 1..2800 FT /organism="Tomato leaf curl New Delhi virus" FT /segment="DNA-B" FT /host="Solanum esculentum" FT /mol_type="genomic DNA" FT /country="Pakistan:Lahore" FT /isolation_source="Leaves" FT /collected_by="Muhammad Tahir" FT /collection_date="02-Jun-2004" FT /clone="ToBL6(2)" FT /db_xref="taxon:223347" FT CDS 550..1356 FT /gene="NSP" FT /product="nuclear shuttle protein" FT /function="cell to nucleus movement" FT /db_xref="GOA:D2N271" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D2N271" FT /protein_id="CAO86066.1" FT /translation="MAFPSPYSTPRRSGYPFNRTYNGNKSFRLWKTRKYQNWKRNRSTH FT SIARSPTELFGDPISKQYTRKEICETQEGSEYLLHNNRYMTSYVTYPSKTRTGTDNRVR FT SYIKLKSLNISGTFAVRKSDLMTEVVQTNGLYGVMSIVVVRDKSPKIYSATQPLIPFVE FT LFGSVNACRGSLKVAERHHERFVLLNQTSIVVNTPHSNAIKKFCIRNCIPRTYTTWVTF FT KDEEEDSCTGRYSNILRNAIILYYVWLSDVSSQVDLYSNVILNYIG" FT CDS complement(1413..2258) FT /gene="MP" FT /product="movement protein" FT /db_xref="GOA:D2N272" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D2N272" FT /protein_id="CAO86067.1" FT /translation="MSIGNDGMGMGVGGYIQSERVEYALTNDAAEVTLSFPSMFEQKLS FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVVEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSSFFSLKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRPPKIEIQ FT TKEFTMNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPYLAIGPNESWASRSEIGLS FT SVTSRPYRNLSGLDDSAIDPGPSASQAGSITREEIADIITKTVEQCIKSNVNAPITKSV FT " XX SQ Sequence 2800 BP; 814 A; 633 C; 507 G; 845 T; 1 other; accgaaaggc cgcgaaaatt ttgaccccct tatcctgacc gttgatgcgt aatcattgca 60 cgccgttatc cgtccgattt gcaacacgtg tatcccacta acagacttta tggaaataaa 120 tgtctgaatg cgtctcttta ctgcatatgt gttccccata tgtctttatc gtacttctat 180 tatgtgcgta tgtggtcccc ccgcattata taaagtcttt tacataaatc aaactgcctt 240 ctttgctatg tatattttga tcggtcgaga tcaaaaatta aatatgtctc gcctaaacat 300 tatcccgttc cgttccgaat ccttcaattg aagaattatt gttttttaaa atttccaaaa 360 cccaaattaa cctttcgctc ccccaaatct ttaatggcca ccgccttgta acaaatacct 420 aaatttataa aaactggaac aatacattgt ttgaatttta tgcacgctgt acaatactaa 480 tttataaaac tgctacatat atgacattgc atagtcctgt cgttgccaca catttcctat 540 cccatccaaa tggcgtttcc ctctccttat tccacccctc gccgttccgg ttacccattc 600 aacagaacat acaacggaaa caagagtttc cgcttgtgga agacccggaa gtatcaaaac 660 tggaagcgca atcgcagtac ccattccata gcacgttcgc caaccgaact gtttggcgat 720 ccaatctcca aacaatatac gcgtaaggaa atctgtgaaa cacaggaggg ttcggagtat 780 ctactgcaca acaatcgtta catgacgtca tatgtgacgt atccatcgaa aacaagaact 840 ggaacggaca accgcgttcg ttcctatatc aagctaaaga gtctgaacat atctgggaca 900 tttgctgttc gtaaatctga cttgatgacc gaagtggtgc aaacaaatgg tttatacgga 960 gtgatgtcta tagttgtagt ccgcgataaa tctccaaaga tttattctgc gacccaacct 1020 ttaataccct ttgttgagct atttggatct gttaatgcat gcaggggcag tctgaaagtg 1080 gcagaacgcc accatgaacg cttcgtactt ctgaatcaaa catccatcgt cgtcaatacc 1140 cctcattcta acgctatcaa gaaattctgc attcgtaact gcatcccaag aacttacaca 1200 acctgggtaa cgttcaagga cgaagaagaa gatagctgta ctggacgata ttctaacatc 1260 ctccgaaatg caattatttt atattatgta tggttaagcg atgtatcctc acaagtcgat 1320 ctttatagca atgtaattct taattacatt ggataatata tgaaaatgca gaagaaacat 1380 tttattgata aataaatttg gcttaaaatt tattacacgc tcttcgttat tggagcattt 1440 acattggatt ttatacattg ctctacagtc ttcgtaatta tatctgcaat ctcttccctt 1500 gtaatactcc ccgcctgtga tgccgacgga cctggatcga ttgccgaatc atccaatccg 1560 ctaagatttc tatatggtct gctggtgacg gacgaaagtc cgatctccga tctgcttgcc 1620 catgattcgt tcggacctat agccagatag ggtacccgta acgatcttga actatgtccc 1680 attaaccttg aaccatctac aagacgcctt gtttgtggtt tggaacccac agaccagaaa 1740 tcaatgtcgt tcatggtgaa ttccttggtc tgtatttcta tctttggtgg tcggaattcg 1800 acgtcagtcg aatgttttgc cgacgacagc ttcaatttcc ctagcatctt acagaagtgt 1860 accccattga cgacgtttgt gttctccact cggtattcaa ctctccaagg attcttatcc 1920 ttgagagaga agaatgagga agagtagtag tgcaggttgc aattgcattt gatcggaatt 1980 gtgaattccg cttgttttgt gtccccctcc gtcaatctca tgtcgtgtat ctctacgacg 2040 acatgaccaa cagcattaat tggaacctga ctgcgatatt ccagaactac gtgatctatt 2100 ttcatgcatc tattcctcaa ctggctaagc ttctgctcga acatggaagg aaatgacaag 2160 gtgacttctg cagcatcatt tgtgagcgca tattcaacgc gctcagattg aatataccca 2220 cctactccca tacccatacc atcatttcct attgacatat tggtcgcgca gcgcaccacc 2280 cactgaaaca cagaaagaca gacgacgtgc aaagaaaccc caacgaagaa gaaaccctag 2340 caaacaacga agttgttttg caaagaatgg atgaatttgt tttataatgc tattgcatgt 2400 catgtytatg tcataccaat taccctaaaa tgaacggcac atatttttct acgaaaaaga 2460 agttgtgcat gcatatggga tgtctgttta tttacggtat acatgggaag cccaatttat 2520 gttaattggg ctgaagtata aattctgaag aagcccatga aattggccca ccatccaggt 2580 ccatttttaa aatgacatcg tatgtgtgtt attgtgtgta taaaagttag agagaagcag 2640 cagtttctct ctctagaact cattcggcgt ccctcaactt atctatataa ttggtgtctg 2700 gagtcctata tataggtaag acaccatatg gcattattgt aattttgaaa agaaaattac 2760 tttaattcaa attccctata gcggcctttc atataatatt 2800 //