ID AM774295; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC AM774295; XX DT 07-JAN-2010 (Rel. 103, Created) DT 11-AUG-2010 (Rel. 105, Last updated, Version 2) XX DE Cotton leaf curl virus-[Burewala] DNA A, complete sequence, clone LA Kw5 XX KW AC1 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; C4 protein; Coat protein; KW pre-coat protein; replication associated protein; KW replication enhancer protein. XX OS Cotton leaf curl Burewala virus - [India:Vehari:2006] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2759 RA Amrao L.; RT ; RL Submitted (24-JUL-2007) to the INSDC. RL Amrao L., Plant Biotehnology Division, NIBGE, Jhang Road, Faisalabad, P.O. RL Box 577, PAKISTAN. XX RN [2] RX DOI; 10.1016/j.virusres.2010.06.019. RX PUBMED; 20600387. RA Amrao L., Amin I., Shahid M.S., Briddon R.W., Mansoor S.; RT "Cotton leaf curl disease in resistant cotton is associated with a single RT begomovirus that lacks an intact transcriptional activator protein"; RL Virus Res. 152(1-2):153-163(2010). XX DR MD5; c9f75e837d7279abf68224d54dcdc5e4. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Cotton leaf curl Burewala virus - FT [India:Vehari:2006]" FT /mol_type="genomic DNA" FT /country="Pakistan:Khanewal" FT /collected_by="Luqman Amrao" FT /collection_date="Jun-2004" FT /clone="LA Kw5" FT /tissue_type="leaf" FT /db_xref="taxon:418448" FT CDS 132..488 FT /transl_table=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:D2N200" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2N200" FT /protein_id="CAO85762.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYPPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS 292..1062 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D2N201" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D2N201" FT /protein_id="CAO85763.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTHGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1059..1463) FT /transl_table=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:D2N202" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2N202" FT /protein_id="CAO85764.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFIDQSSSIKFNIY" FT CDS complement(1505..2596) FT /transl_table=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:D2N203" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2N203" FT /protein_id="CAO85765.1" FT /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLNEEKNTALKNWALKNAIFITLEGPL FT YSASNQSTAQGSEETQQEEESRY" FT CDS complement(2137..2682) FT /transl_table=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2N204" FT /protein_id="CAO85766.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSARITDS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLT FT PQHLTQAVSQRLLESLRN" XX SQ Sequence 2759 BP; 720 A; 545 C; 646 G; 848 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaaacttaaa taattctccc gcttattata agtacttcgt tgctaagtat 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttaccct cctgatacat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc atggtactgg gctgactcat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt 1080 gaagatgatt ggtctataaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagataat aagaacaccc 1500 tcattcaata tctactctcc tcctcctgtt gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtacagt ggtccttcga gagtgatgaa gattgcattt tttaaggccc 1620 aattctttaa tgctgtgttt ttttcctcgt tgaggaattc cttataactg ctgttcggac 1680 caggattgca cagaaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca 1860 ggtccagatg tccgcacaaa tagttatgtg gtcccaatga tctagcccac atcgtcttcc 1920 ccgttcgact atctccctca attactatac tccgaggtct aaggggccgc gcagcggcat 1980 cgacaacgtt atcgatggcc caaacttcaa gttcttctgg aacttgatcg aaagaagaag 2040 gagaaaaagg agaaatatag ggagccggtg gctcctgaaa gattctgtct agatttgcat 2100 ttaaattatg aaattgtagt acaaaatctt taggagctag ttccttaatg actctaagag 2160 cctctgactt actgcctgcg ttaagtgctg cggcgtaagc gtcgttggct gtctgctgtc 2220 ctcctcttgc tgatcttcca tcgatctgaa actctcccca ctcgagagtg tccccgtcct 2280 tgtcgatgta ggccttgaca tctgagcttg atttagctcc ctgaatgttc ggatggaaat 2340 gtgctgacct ggttggggat accaggtcga agaatctgtt attcgtgcag acgaatttgc 2400 cctcgaactg gatgagcaca tggagatgag ggctcccatc ttcgtgtaac tctctgcaga 2460 gtttgatgta ttttttattc gagggtgtgt tgatggcttg aatttgggaa agtgcttcct 2520 ctttagtgag tgagcactgt ggataagtga tgaaataatt tttggcttgt actttaaaac 2580 gtttgggggg agccattgac tttggtcaat tagagacaac tgatgggctt ttactctggg 2640 aattggagac tggatacaat ttatagtgtc tccaaatggc atattctgta aataactaga 2700 agtttgtttg aaattcaaat tcccctttgg gctccaaaag cggccatccg tataatatt 2759 //