ID AM747816; SV 1; linear; genomic DNA; STD; VRL; 2734 BP. XX AC AM747816; XX DT 20-JUN-2008 (Rel. 96, Created) DT 03-DEC-2009 (Rel. 103, Last updated, Version 2) XX DE Wheat dwarf virus MP gene, CP gene, RepA gene and Rep gene, isolate Barley XX KW coat protein; CP gene; movement protein; MP gene; Rep gene; RepA gene; KW replication associated protein; replication associated protein A. XX OS Wheat dwarf virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2734 RA Ramsell J.N.E.; RT ; RL Submitted (20-JUN-2007) to the INSDC. RL Ramsell J.N.E., Dept. of Plant Biol. and Forest Genetics, Swedish Univ. of RL Agricultural Sciences, P.O. Box 7080, SE-750 07 Uppsala, SWEDEN. XX RN [2] RX DOI; 10.1111/j.1365-3059.2009.02146.x. RX AGRICOLA; IND44285689. RA Ramsell J.N.E., Boulton M.I., Martin D.P., Valkonen J.P.T., Kvarnheden A.; RT "Studies on the host range of the barley strain of Wheat dwarf virus using RT an agroinfectious viral clone"; RL Plant Pathol. 58(6):1161-1169(2009). XX DR MD5; 7db2fad8256db6c07ccc936461ed4909. DR EuropePMC; PMC6523583; 30633425. XX FH Key Location/Qualifiers FH FT source 1..2734 FT /organism="Wheat dwarf virus" FT /isolate="Barley" FT /mol_type="genomic DNA" FT /country="Hungary" FT /isolation_source="Hordeum vulgare" FT /db_xref="taxon:10834" FT misc_feature 1..171 FT /note="Long Intergenic Region, LIR" FT CDS 172..444 FT /gene="MP" FT /product="movement protein" FT /db_xref="GOA:Q5K2S1" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:Q5K2S1" FT /protein_id="CAO77844.1" FT /translation="MDQVFTPPRSIRADQYQAPYDPGSSDYAWRTFVFVSFGLLISVGV FT VWLAYTLFLKDCILVWKAKKQRRTEEIGYGNTPARPNGDQQGLPR" FT CDS 416..1198 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:A6GVG4" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:A6GVG4" FT /protein_id="CAO77845.1" FT /translation="MVTNKDSRGKGKRKLEEGESSGRWKGQVYKRRKQTYKVVPVRPPA FT LCVYRYNWLNSDKTNIVVGNTPRIDLITCFAAGKADNNRHTNQTILYKFNLQGTCYVSD FT SSCMFITPIRVYHWLVYDAEPKQATPDSTDIFTMPWNLLPSSWTVQRAWSHRFVVKRKW FT CVNLVSDGRKVGSKTVDSRYNYVVGKNIVDASKFVKGLRVTTEWMNTGDGKIGDIKKGA FT LYLVTCTRGGITGDSASISFEVVCAYTHACYFKSIGIQ" FT misc_feature 1028..1369 FT /note="Short Intergenic Region, SIR" FT CDS complement(join(1370..1783,1870..2499)) FT /gene="Rep" FT /product="replication associated protein" FT /db_xref="GOA:A6GVG5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:A6GVG5" FT /protein_id="CAO77846.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQYALDSLRTLLAKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNIGMNTSPFSFFHPNIQAAKDCNQVR FT DYIMKEVDSDVNTAEWGTFVAVTTPGRKDRDADMKQIIESSTSREEFLSMVCHRFPFEW FT SIRLKDFEYTARHLFPDPVSTYTPEFPIESLMCHETIESWKNEHLYSESPGRHKSIYIC FT GPTRTGKTSWARSLGIHNYYNSLVDFTTYDVNAKYNIIDDIPFKFTPNWKCFVGAQRDF FT TVNPKYGKRKMIRGGIPCIILVNPDEDWLKDMTPEQSDYMYSNAVIHYMYEGESFFAFG FT ENVTASQ" FT exon complement(1370..1783) FT /gene="Rep" FT /number=2 FT CDS complement(1705..2499) FT /gene="RepA" FT /product="replication associated protein A" FT /db_xref="GOA:A6GVG6" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A6GVG6" FT /protein_id="CAO77847.1" FT /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQYALDSLRTLLAKYEPLY FT IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNIGMNTSPFSFFHPNIQAAKDCNQVR FT DYIMKEVDSDVNTAEWGTFVAVTTPGRKDRDADMKQIIESSTSREEFLSMVCHRFPFEW FT SIRLKDFEYTARHLFPDPVSTYTPEFPIESLMCHETIESWKNEHLYSVSLESYILCTST FT PADKAVTDLEWMDDYSRSHRDGISPSTSAVRQEQERLPGQDL" FT intron complement(1784..1869) FT /gene="Rep" FT /number=1 FT exon complement(1870..2499) FT /gene="Rep" FT /number=1 FT misc_feature 2500..2734 FT /note="Long Intergenic Region, LIR" XX SQ Sequence 2734 BP; 693 A; 600 C; 745 G; 696 T; 0 other; accctgcgtg gcgggtcccg aggcgcactc ggcttttcgt gagtgcgccg aggcttttgg 60 accacgtctt tatgtcatca catcaattat tggtggtgag tcatcacata ttccacctgc 120 aattatgtgc catcgcttag cttataagga agtgtcgggg aaggtatctc gatggatcag 180 gtctttacac cgccgcgttc tatacgggca gatcaatacc aggcccctta cgatcccggg 240 tcctccgact acgcctggcg gacctttgtg ttcgtctcct tcggtttgtt aatatccgta 300 ggagttgttt ggttggctta cactctgttc ttgaaggact gcatattagt gtggaaggcg 360 aagaagcaga ggaggaccga ggaaattggt tacggtaata caccggccag accaaatggt 420 gaccaacaag gactcccgag gtaagggaaa gaggaagctc gaggagggcg aatcgagtgg 480 aaggtggaag gggcaagtgt ataagcggcg taagcagacc tacaaggtag tacctgtgag 540 gccacccgcc ctgtgtgtgt accggtataa ctggctcaat tcagacaaga ccaatatcgt 600 ggtgggtaac acccctcgga ttgatctgat tacctgcttt gcagcgggca aggccgataa 660 taatcggcat acaaatcaga ccatcctcta caagtttaac ctacagggga cctgttacgt 720 gtcggactct tcatgtatgt tcataacccc aatcagggtt tatcactggt tggtctatga 780 tgcagagccg aagcaggcta cgcctgactc cactgacatc tttacgatgc cttggaatct 840 gctgccgagt tcatggactg tgcagagggc ttggtcgcat cggttcgtgg tgaagaggaa 900 gtggtgcgtg aacctggtct ccgatggaag gaaggttgga tccaagacgg tggactcccg 960 ctacaactac gtagtgggga agaatatcgt tgacgcctcc aagttcgtga agggtttgcg 1020 cgtgacgacg gagtggatga acacgggtga cggcaagata ggcgatatta agaagggtgc 1080 cctgtatcta gtaacctgta ctcgtggagg tatcactgga gacagtgcct ccatttcatt 1140 cgaagttgta tgtgcctata cgcacgcgtg ttacttcaaa tccattggga ttcaataaat 1200 aaaatagtat tttattcatc tcatgtcatt cgattacaga tgctcggcta cgagcaaaga 1260 taaaccaaac tatgacatac aacacactca taaccaaaac atcgaaaaaa gaaatacaag 1320 gggcgagatc acacaatttt agaaaccgta gccgtccgcg ctaggacagt cactgcgaag 1380 cagtgacatt ttcgccgaag gcgaagaatg attcaccctc atacatataa tgtatcacag 1440 cgttagagta catgtaatcc gactgttcag gagtcatatc cttgagccaa tcttcgtctg 1500 ggttaactaa aatgatgcaa ggtataccac cccgtatcat ttttcgcttc ccgtacttag 1560 gattgacggt gaagtcacgc tgagccccga cgaagcactt ccagtttggc gtgaacttga 1620 atggaatgtc gtcaattatg ttgtacttgg cgttgacgtc ataggtcgtg aaatcaacta 1680 ggctgttgta gtagttgtgg atccctagag atcttgccca ggaagtcttt cctgttcttg 1740 tcggaccgca gatgtagatg gacttatgcc gtcccggtga ctcctggaat aatcgtccat 1800 ccactctaaa tcagttacgg ccttatccgc aggagttgaa gtacaaagga tatatgattc 1860 gaggcttacg gagtagagat gttcattttt ccagctttca atggtctcat gacacatgag 1920 ggactcgatg ggaaactcag gtgtgtaagt gctaactggg tctgggaata ggtggcgtgc 1980 agtgtattcg aagtctttca gacggataga ccattcaaac ggaaaacgat ggcagaccat 2040 gctgagaaat tcctctctcg aggtactcga ctcaatgatc tgtttcatat ccgcgtctcg 2100 gtctttacga cccggagtgg taactgctac gaatgttccc cactcagccg tgttgacatc 2160 ggagtcaacc tccttcatga tgtaatcacg aacttggttg cagtctttgg cagcttgaat 2220 gttaggatga aaaaatgaaa atggtgatgt gttcatacca atgttgagag cattgggatt 2280 ggtgatggaa gcacgaagct tgttttgcac gagtacgtgc agatgtggtg atccatcttc 2340 gtggagttcc ctaactgcag ctatgtacag aggttcatat ttggccaaga gagtgcgaag 2400 agagtccaag gcgtactgtg gctctaggat gcattgagga tatgttagga agaggtattt 2460 ggaatagaca cggaacctgg gtgcagatga agaggccata gtagcaagca gaagcccggc 2520 aggtccttag cgaaaaaacg gggtgtgctc gcgaactcta ctctctaccc tgcgtgggag 2580 tgtgcagaat tcacaccgat gggctcggtg tccacggttt aaatattgca ggtttaggtg 2640 ggaacgcggg accctgtctt ttcggcgcga aagcgacggg tggtcccgcg tgtggtttgt 2700 ggctcgggga cccgccacgc aggaatctaa tatt 2734 //