ID AM744978; SV 1; linear; genomic RNA; STD; VRL; 2968 BP. XX AC AM744978; XX DT 29-SEP-2009 (Rel. 102, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 3) XX DE Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) DE segment 2 XX KW complete genome segment. XX OS Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-2968 RA Anthony S.J.; RT ; RL Submitted (30-MAY-2007) to the INSDC. RL Anthony S.J., Department of Arbovirology, Institute for Animal Health, Ash RL Road, Pirbright, Surrey GU24 0NF, UK. XX RN [2] RX DOI; 10.1016/j.virusres.2009.07.012 . RX PUBMED; 19632281. RA Anthony S.J., Maan S., Maan N., Kgosana L., Bachanek-Bankowska K., RA Batten C., Darpel K.E., Sutton G., Attoui H., Mertens P.P.; RT "Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 RT of epizootic haemorrhagic disease virus (EHDV): Comparison of genetic and RT serological data to characterise the EHDV serogroup"; RL Virus Res. 0:0(2009). XX DR MD5; b2951f6e9a348367e07486f2bd98b521. DR BioSample; SAMEA3283075. XX FH Key Location/Qualifiers FH FT source 1..2968 FT /organism="Epizootic hemorrhagic disease virus (serotype 1 FT / strain New Jersey)" FT /segment="2" FT /strain="New Jersey" FT /isolate="USA1955/01" FT /serotype="1" FT /mol_type="genomic RNA" FT /country="USA:New Jersey" FT /collection_date="1955" FT /db_xref="taxon:449133" FT CDS 17..2932 FT /gene="VP2" FT /product="VP2 protein" FT /db_xref="GOA:C8TE59" FT /db_xref="InterPro:IPR001742" FT /db_xref="UniProtKB/TrEMBL:C8TE59" FT /protein_id="CAN89078.1" FT /translation="MEDINLTIFSDDALPHAVVVDDYVIAIKRNPNGTFLEPHQMYDRY FT TQEFLQGKARDVLRQNGRDGYKLIIPEALSTGIIRYENKTKGAQSEVELENQLRSSIRH FT QRVKPRMDEAHRKLQIELRGGQILLHPRIAESIEFSIISKENATCSHTPVNCAYEVLLS FT GGINVGTGTCYDLSSRLKLRVIGDVDRHRRSMQNVLGRVIHTGDPKIINRVNQIGSQQF FT IDRAIGPDKFELKREIFDRLKALDVDVRKVIREEEASAELDEMGRRWMRDQNVNIVNDI FT IQSLVKKGSRSEKLAHRNEQGMQARFRRTIATNLRDQRQGKEVLNIRGTRDQPEEKKFA FT AVLLMTGCDIVERAIWSNEETAILRGLYAYAHDKLGCVYRAMKKDFVWSIRPTYTDRCA FT GVCDRKRTIMVREDYFDLQREENDSVYKWIITEWDKNDVIISAKNGYLYSKYSGEDEDD FT ILVHEIDDRLYTAMIDRILINGWIEKEGLSQIIKEEVRLESFDFTKDAYVDEAGFLVLP FT EYYDRVIASNIYDCKFKISRVSITSSSNDDPWDKKTADSIIDEQCLWKIPLPNIIDVRP FT CFRGDLLTSNSQEYSKRFSGIIDELKKDKEIYDDFIPVQEGVRPCVQGHVCRYAFYRQK FT LTIFTILKRYYPIERILELTDEEDYEYNLYLDKECYKKESLILNLRSIFSLICFLIDFG FT YEGREITRGEDEYLKIFNEINYGGHARKEAINKYFPQFYQRLMRVRTSENIEDLLPLAF FT YQALLLSDPCTDNSEKSSHPLILFCQDKVRVVPIRTATQERGLPLLCCIHIFKFHPGLQ FT MRKKELEDDIKKTLPAIFDYWIELEMKRLDTGDRLRTRAQMVELYYSTNCGGSYETLNF FT VFPIVHPNKGFIACVISSKGGMGALNEDDVRRRFRRIQSSIQGIFSISIDEEMEIQLHH FT SGNIQARILEKVFFEHKWHIVQVKLNGKIFENHELITKLMN" XX SQ Sequence 2968 BP; 1012 A; 451 C; 732 G; 773 T; 0 other; gttaaattgt gtcaggatgg aggacattaa cctaactata ttcagtgatg atgcattacc 60 acacgcggtg gtggttgatg attatgtaat cgcgattaag cgcaacccga acggaacgtt 120 tctcgaaccg catcaaatgt atgacagata cacgcaagaa tttttacaag gcaaagcgag 180 ggatgttcta cgccaaaacg gtcgagacgg atataagtta atcatacctg aagcgttaag 240 cactggaata attcgttatg agaataaaac taaaggagct cagagtgagg ttgaattaga 300 aaatcagctg cggtcatcta ttaggcatca aagagtgaag ccgagaatgg acgaggcgca 360 tagaaagtta cagatagaat taagaggtgg acagatactt ctacatccgc ggatagcgga 420 aagtatcgaa ttttcaatta tatcaaagga aaacgcgacg tgttcacata cgccagtgaa 480 ttgcgcgtat gaggtcttgt tatcaggagg tataaatgta ggcactggaa catgctacga 540 tttaagtagt cgtcttaaat taagagtaat aggcgatgtt gatcgacatc gacgaagtat 600 gcaaaatgtt ttagggaggg tgattcatac aggggatcca aagattataa atagagttaa 660 tcagatcgga tcgcagcaat tcatagatag agcaattggg cctgataagt tcgaattgaa 720 gcgagaaatt ttcgatcggc tgaaggcgtt ggacgttgat gtgagaaaag tcataagaga 780 agaagaagcg agcgcagagc tggatgaaat gggtagacgg tggatgagag atcagaatgt 840 aaatattgta aatgatatca tacagagtct agttaagaaa ggcagtagaa gtgaaaagtt 900 agcgcacaga aacgaacaag ggatgcaagc aaggtttcga agaaccatag cgacgaattt 960 gcgagatcag cgccaaggta aggaggtact gaatataaga gggactcgag atcaaccgga 1020 agagaagaaa tttgcagcgg ttttgctgat gacaggttgc gatattgtcg aacgcgctat 1080 ctggagcaat gaagaaacag caatattacg agggttatac gcgtacgcgc acgataaact 1140 tggatgcgta tatcgtgcca tgaaaaaaga ttttgtgtgg tcaatcagac ctacgtacac 1200 tgacagatgc gcaggagttt gcgataggaa acggacaatt atggtgagag aagattattt 1260 tgatttacaa cgtgaggaaa atgatagcgt ttacaaatgg attataacgg aatgggataa 1320 aaacgacgta atcatttcag caaagaatgg ctacctatat tcgaaatatt cgggtgaaga 1380 tgaggacgat atattagtac atgagattga tgatagacta tatacggcga tgattgatcg 1440 tattttaata aacgggtgga tcgagaaaga aggattgtcg cagattataa aggaggaagt 1500 ccggttagag tcttttgatt tcacaaagga tgcatatgtg gatgaggcgg gatttttagt 1560 actaccagag tattatgata gagtgattgc gtctaacata tatgattgta aatttaaaat 1620 atcaagagtg agcataacgt catcaagtaa tgatgatccc tgggacaaaa aaaccgcaga 1680 tagtatcatc gatgaacagt gcttatggaa aattccactg cccaacatta ttgacgtaag 1740 accgtgtttc cgaggcgatt tactaacatc aaatagccaa gagtacagta agaggttttc 1800 tggtatcatc gatgagctga aaaaggacaa ggaaatatat gacgatttta taccggtgca 1860 agagggcgta cgaccatgcg ttcagggaca tgtatgtcgc tatgcttttt ataggcagaa 1920 gttgacgatc ttcacgatac ttaaacgtta ttatccaata gaacgaattt tagaattgac 1980 cgatgaggaa gattatgaat ataacctgta tctggataaa gagtgttaca agaaagagtc 2040 gctcattctg aacctccgaa gtatcttttc tttaatatgc ttcttaattg attttggtta 2100 tgaagggaga gaaatcacac ggggagagga tgaatattta aagattttta atgaaatcaa 2160 ctacggagga catgcgcgaa aagaggctat aaataaatat tttccacagt tttatcaaag 2220 attgatgcga gtcagaacgt ccgaaaacat agaagacctt ttgccattag ccttttatca 2280 ggccttgtta ttatctgatc cctgtactga caattccgag aaaagttcac atccgcttat 2340 cttgttttgt caagacaaag ttagagtagt gcctatacga acggcgacgc aagaaagagg 2400 gttaccttta ctgtgctgta tacatatatt taaattccat ccgggtttac aaatgaggaa 2460 aaaagaatta gaggatgata taaagaaaac gctaccagct atctttgatt attggattga 2520 gttggagatg aagcgattgg acacgggaga tagactgaga acccgtgcac aaatggtaga 2580 attatactat tcaacaaact gtggagggtc gtatgaaacg ctgaacttcg tatttccaat 2640 tgtacatccg aacaaagggt ttattgcgtg tgtgatttct agtaagggcg gaatgggagc 2700 gttaaacgag gacgacgtaa gacgacgttt cagacgtatt cagagctcga tccaggggat 2760 tttttccatc agcattgatg aagagatgga gatacagttg catcatagcg ggaacataca 2820 agcacgtatt ttagagaagg tattttttga acataaatgg cacattgtgc aggttaaatt 2880 gaatggtaag atttttgaaa atcatgaatt aattacaaaa ttaatgaact gatccggtgg 2940 aacggatcac ctgacacaac acgcttac 2968 //