ID AM744977; SV 1; linear; genomic RNA; STD; VRL; 3942 BP. XX AC AM744977; XX DT 29-SEP-2009 (Rel. 102, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 3) XX DE Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) DE segment 1 XX KW complete genome segment. XX OS Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-3942 RA Anthony S.J.; RT ; RL Submitted (30-MAY-2007) to the INSDC. RL Anthony S.J., Department of Arbovirology, Institute for Animal Health, Ash RL Road, Pirbright, Surrey GU24 0NF, UK. XX RN [2] RX DOI; 10.1016/j.virusres.2009.07.011. RX PUBMED; 19632280. RA Anthony S.J., Maan N., Maan S., Sutton G., Attoui H., Mertens P.P.; RT "Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 RT and VP7 of epizootic haemorrhagic disease virus (EHDV)"; RL Virus Res. 145(2):187-199(2009). XX DR MD5; 3ccb11e01172b97849a8b00f16251745. DR BioSample; SAMEA3283075. XX FH Key Location/Qualifiers FH FT source 1..3942 FT /organism="Epizootic hemorrhagic disease virus (serotype 1 FT / strain New Jersey)" FT /segment="1" FT /strain="New Jersey" FT /isolate="USA1955/01" FT /serotype="1" FT /mol_type="genomic RNA" FT /country="USA:New Jersey" FT /collection_date="1955" FT /db_xref="taxon:449133" FT CDS 12..3920 FT /gene="VP1" FT /product="VP1 protein" FT /db_xref="GOA:C8TE58" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/TrEMBL:C8TE58" FT /protein_id="CAN99545.1" FT /translation="MVAITVQGAELIKRVVERIYPGTSFDLSEGVIEFYKFSDHIRRIR FT EKHGVVYKRKAEEIERNIKLRKEELFGIPVLRDSTWEEIFNIDYKDDAVFQVYMNSVLR FT QEDLEPEEEFLRNYRVHGEHAGLTQFIEQRAKNEMQIYGDIPIKVWAAFLLELDFETKH FT QSLGVKVMSSFIKRFGEPFHQGFRDLSNLEDFNISYSTPLLFEMCCMESILEHNIIMRM FT KEEGIQTLEYGDEKIDPVALLRELFIVCLPHPKKINNMLRSPYSWFVKMWGVGAEQITV FT LTSGAGDDRNSKDVFYDRYQTNLNRYVDIFKCKFYSDSLKSNSDKVQEAITYSQNLGMH FT HYGLPVFESLLRSVYRRPFYPFKQSNLMLASFLLSLQVITGYGRAWVKNVGTDFDKQMK FT PTPDNLIAQVSEGTRDNFIQAYNEAKEKREEIVKPEDLYTSMLRLARNTSSGFAAEILI FT QKRFGPNKRKELVKINSRIKAVVIFTRGHIVFTPTELEKKYNTAELYQTKGSRDVPIKA FT TRTIYSINLSVLVPQLIVTLPLNEYFARVGGNTSPEYKKLGGKIIVGDLEATGSRVVDA FT ADCFRNSGDKDILVIAIDYSEYDTHLTRYNFRKGMLEGIRESMKPYKDLRYEGYDLDQI FT IEFGYGEGRVSRTLWNGKRRVFKTTLDKYLSLSEAERAQGEFKVPKGVLPVSTINVAEK FT IEVERNFNTLISATDGSDLALIDTHLSGENSTLIANSMHNKAIGGLIQSELKKEHMHDI FT TFLSEQYVGDDTLFYCKLHTTDRTKIQQMITKIFETVTKCGHEAAPSKTMITPYSVEKT FT QTHAKQGIYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMVTKVSRGFCHDLAQLILML FT KTTFIGAWKMKRTIKEEGIYRDRKFDSNEEDGYTLVMLRNPLALYVPIGWNGYGAHPVA FT INIVMTEEMFLDSMCIGNLDEVMRPILKIRGKIPPTWNETEADKRAIGSETKMSFFSKM FT ARPAVQIALNNREIMEAVEHLPLGDFSPGKLSRTMMHSALLKESKARSLLAAGYELDYQ FT KSLNAWSEERVMVAMREEPGVISTSYGKLFDLYFEDEVMEAPYMFPDQNLSPQFYIQKM FT KIGPRCSSRIRTSYIDRIDVILRKDVVMRGFITANTILNVIEKLGTNHTASDLTTVFTL FT MNIESKVAEELSEYITSEKIRFDALKLLKKGIAGDEFTMSIDVATQAMVDKFIKYPHQL FT TKTELDAIVLYCSQIIMLRAACGLPLKKMRLVVLDEAKRRFKVRAQRFRTHIPRIKVIK FT KLMDLNRMSVRRLENQFV" XX SQ Sequence 3942 BP; 1320 A; 644 C; 938 G; 1040 T; 0 other; gttaaaatgc aatggtcgca attaccgtgc aaggtgctga actcattaaa cgagtggttg 60 aaaggatata cccaggaacg tcatttgatt taagcgaggg cgttattgaa ttttataaat 120 tttcagacca tataaggcgt attagagaga aacatggggt ggtgtataaa cggaaagcgg 180 aggaaatcga acgtaatata aaactgagaa aggaagagct atttggaata cccgttctac 240 gtgattcgac ctgggaagaa atttttaaca tcgattacaa agatgacgcg gtgttccaag 300 tttatatgaa ttccgtgtta cgccaagaag acttagaacc agaggaggaa ttcttgcgaa 360 attatagagt gcatggtgaa cacgctggat tgacgcaatt tatagaacaa agggcgaaaa 420 atgaaatgca aatatacgga gatataccta ttaaggtttg ggcagcattt ctattagagt 480 tagattttga aacgaagcac caaagtttgg gagtaaaggt tatgtcatct ttcattaaac 540 gatttggaga accgtttcat cagggtttca gagatttatc gaatcttgag gattttaaca 600 tttcgtactc aacgccttta ttatttgaga tgtgttgtat ggagtcaatc ttagagcaca 660 acattataat gcgaatgaaa gaagaaggta tacagacttt agagtatggc gatgagaaaa 720 tcgatccggt agctttactg cgtgagttat ttattgtatg tttacctcat ccgaaaaaga 780 taaacaatat gctaagatcg ccatattcgt ggttcgttaa aatgtgggga gtaggcgcag 840 aacaaattac tgtgttaacg tcgggagcgg gggatgatcg taattctaag gatgtctttt 900 atgacaggta tcaaacaaat ctaaatcgat atgtggacat ttttaaatgt aaattttatt 960 cagactcact aaaatcgaat tcagataaag tacaggaagc gataacttat tcacagaact 1020 tgggcatgca tcattatggc ttacctgttt ttgaatcgtt attacgaagt gtctacagac 1080 gacctttcta cccctttaaa cagagtaact taatgttagc ttcatttctg ttgagtctac 1140 aggtaataac gggatatgga agggcgtggg taaagaatgt aggcactgac ttcgacaaac 1200 agatgaaacc aacacccgac aatttaattg cgcaagtctc agaaggaaca cgcgataatt 1260 tcatacaagc ttataacgaa gcaaaagaga aaagagagga aatagtcaag cccgaggacc 1320 tatatacttc aatgttgaga ttagctagaa atacaagctc agggtttgct gcagaaattt 1380 taatacagaa acggtttgga ccgaataaaa gaaaagaatt ggtaaaaata aattcgagaa 1440 ttaaggcggt cgttatcttt acaagaggcc acattgtctt cacacccact gaattggaga 1500 agaagtataa tactgcagaa ttataccaaa caaagggttc aagagatgta ccaatcaaag 1560 caacaaggac gatctactcg attaatttat cagtgctagt accgcagctc attgttaccc 1620 tacctcttaa tgaatatttt gcgcgggtag gcggaaatac gtcaccggag tacaagaaat 1680 taggaggaaa aatcatagta ggtgatttgg aagcgacggg gtcgcgtgtg gtcgatgctg 1740 cagattgctt tagaaacagt ggagataaag acatactggt gatcgcaatt gactatagcg 1800 aatatgatac gcatttaact cgttataatt ttcgaaaagg catgttagag gggatacgtg 1860 agtcaatgaa gccatataaa gatttaagat atgaaggtta cgatctggat caaatcatag 1920 aatttggtta tggcgaaggt cgtgtttcac gaacgctatg gaatggaaaa agacgtgtgt 1980 ttaagactac gttagataaa tatctgagtc tatcagaggc ggagcgcgcg caaggagaat 2040 tcaaagtccc gaaaggagta ttaccagtct caactattaa tgtggctgaa aaaattgagg 2100 ttgaaagaaa tttcaacaca ttgatatctg cgacggatgg gagcgatttg gctttaattg 2160 acactcattt atcaggcgaa aattcgactc taattgcgaa ctcaatgcat aacaaagcga 2220 ttggaggtct tatacagagc gaattgaaga aggaacacat gcacgatata actttcctat 2280 cggagcaata cgttggagac gatacattgt tttactgtaa attacacaca actgatagga 2340 caaagattca acaaatgatc acgaagatct tcgaaactgt gacaaaatgt gggcatgaag 2400 cggcgcctag taaaaccatg ataacacctt attccgtcga aaaaacacag acacacgcca 2460 agcagggcat atatgtgccg caggatcgga tgatgataat atcatctgag cgacgtaagg 2520 atattgagga tgtacagggg tacgtgcggt ctcaagtaca aacgatggtg actaaagtca 2580 gcagaggttt ctgccatgac ctagcgcaat taattttaat gttaaagacc acatttattg 2640 gggcgtggaa aatgaaacgt acgataaagg aggaaggcat ttatcgggat cgtaagttcg 2700 attcgaatga agaagacggc tatacacttg tgatgttaag gaatccttta gccttatatg 2760 tcccaatagg atggaatggc tatggagctc accctgtggc tataaatatc gtcatgacag 2820 aagagatgtt tttggattca atgtgtatcg gcaatctgga tgaagtaatg cgtcccattt 2880 taaagattag gggaaagata ccgccaacat ggaatgaaac cgaagcggac aagcgcgcga 2940 ttggttcaga aacaaaaatg agttttttct cgaagatggc acgacccgcg gtgcagatcg 3000 ccttaaacaa ccgcgagatt atggaagcag ttgaacattt accattggga gatttctcac 3060 caggtaaatt gtcaagaacg atgatgcata gcgcactact taaggagtcg aaagcacgtt 3120 ccctcttagc agcaggatac gagctagatt atcaaaagtc attgaatgcg tggtcagaag 3180 aacgagtgat ggtcgctatg cgcgaagagc cgggagtgat atctacttcg tatggcaagc 3240 tgtttgattt atattttgag gatgaagtga tggaagcgcc atatatgttc cctgatcaaa 3300 atttatctcc acagttctat atacagaaga tgaaaatagg accacggtgc agttcgcgca 3360 tacgtacatc ctatatcgat agaattgacg tcatactacg taaagatgtt gtgatgcgtg 3420 gcttcataac cgcgaacacg atcttgaatg tcattgaaaa attaggaacg aaccacactg 3480 cgagtgattt gacaacggta tttacgttga tgaatataga aagcaaagta gcggaagagt 3540 tgtcagaata tattacgagc gagaagattc ggtttgatgc gttgaagctg ctgaagaagg 3600 ggatagcggg ggatgaattt acgatgtcga tagatgtagc gacgcaagct atggtcgata 3660 agtttatcaa atatccgcat cagttgacta agacggaatt agatgcaata gtgctatatt 3720 gttcgcaaat aattatgctg agggccgctt gcggtttacc tttaaaaaag atgaggttag 3780 ttgtacttga tgaagcgaag cgaaggttta aagtacgagc ccaaaggttt agaacacaca 3840 ttccaaggat caaggtaatt aagaaattga tggatttaaa tcgcatgagt gtacgtcgtc 3900 tagagaacca attcgtttag agtgcacccg cattatactt ac 3942 //