ID   AM711115; SV 1; linear; genomic DNA; STD; VRL; 1380 BP.
XX
AC   AM711115;
XX
DT   08-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
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DE   Cotton leaf curl virus-1 (Shadadpur Sindh) rep gene for replication
DE   associated protein, clone DSB
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KW   rep gene; replication associated protein.
XX
OS   Cotton leaf curl virus-1 (Shadadpur Sindh)
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1380
RA   Shahid M.S.;
RT   ;
RL   Submitted (07-MAY-2007) to the INSDC.
RL   Shahid M.S., PBD, NIBGE, Jhang Road Faisalabad, P.O. Box 577 Pakistan, 577,
RL   PAKISTAN.
XX
RN   [2]
RX   DOI; 10.1016/j.virusres.2010.07.003.
RX   PUBMED; 20621137.
RA   Amrao L., Akhter S., Tahir M.N., Amin I., Briddon R.W., Mansoor S.;
RT   "Cotton leaf curl disease in Sindh province of Pakistan is associated with
RT   recombinant begomovirus components";
RL   Virus Res. 153(1):161-165(2010).
XX
DR   MD5; 5c5cf25632c8908619d604e592c05363.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1380
FT                   /organism="Cotton leaf curl virus-1 (Shadadpur Sindh)"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Shadadpur Sindh"
FT                   /clone="DSB"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:442494"
FT   CDS             79..1026
FT                   /transl_table=1
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:D1YST1"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D1YST1"
FT                   /protein_id="CAM97881.1"
FT                   /translation="MAAIKSNWWCFTVFFLTSTAPDLVPLFENTHVSYACWQEEESPTT
FT                   KRRHLQGYLQLKGQRTLNQVKSIFGDLKPHLEKQRARKTDDARDYCMKEETRVSGPFEF
FT                   GEYCPAGSHKRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAPEIQISNLKSW
FT                   QSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARNLYKSGSWFHTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLVVSNKYEPLMAPLLKCIHVVVMSNFLPDF
FT                   EKISVDRVHVIPCIPCGVCLKHHVGEIKCDEYLD"
XX
SQ   Sequence 1380 BP; 411 A; 252 C; 326 G; 391 T; 0 other;
     accccgcctc gagaccccga gctagagacc tgtccgtaca attctctctc tctcttatat        60
     ttctttcttc tgcgatagat ggctgcaatt aagtcaaatt ggtggtgttt cacggtgttt       120
     ttcctcactt ctactgcacc tgacttggtg ccactcttcg agaacactca cgtgagttat       180
     gcctgctggc aagaagagga gtctccgacg acgaaacgtc gccacctgca gggctatctc       240
     caattgaagg gtcagaggac cctgaaccag gtgaagtcta tatttgggga tttgaagccc       300
     catcttgaga aacagcgagc tcgtaagaca gacgatgctc gcgattactg tatgaaagag       360
     gaaactaggg tttccggtcc ctttgaattt ggggaatact gtcctgctgg ttctcacaaa       420
     cgccgacaaa gggaacttgt aattcgctct ccggtgagaa tggcagagga gaatccgtcc       480
     gtattccgac gagtcaaggc aaagattgct gaggaagaat tccagaagag cgcgcctgag       540
     attcaaattt caaatttgaa atcttggcaa tcgcgtctga agacgctcct ggagagggac       600
     ccagacgacc gcactatctt ctgggtttac ggaccagatg gtggtgaagg aaaatccacc       660
     tttgccagaa acctgtacaa aagtgggtcc tggttccata cacgtggagg atctgcagat       720
     aatgtagctt accagtacat aggatgttta gggaataata ttgtatttga tattcctcgt       780
     gataagaagg attatctaca gtacagctta atagagatgt ttaaggatag attagtagtt       840
     agtaataagt atgagcctct tatggcccct ttacttaagt gtattcatgt tgtagttatg       900
     tctaattttc tcccagattt tgagaagatt agtgttgaca gagtccatgt aatcccatgt       960
     attccttgtg gtgtttgtct taagcatcat gttggtgaaa taaaatgtga tgaatatttg      1020
     gattaatctg aaatgtttgc cgtataatag attatattaa gagataaggg ccgcgcagcg      1080
     gcaataacat gagtaatttt gcttcttgaa aacaagaagg aatgaaatga aaaaaaaaaa      1140
     taactgtttt attctgtaca tgtgggtccc acaataatag attaattaaa taaaaaaaaa      1200
     agaaaaggaa aatgatcgtg ggcctattaa tgggccgtaa ctggtttgat gaataatggg      1260
     ctttgaccag tcaaaaaaga aaaggggtta ttttgcaaat attaaaagta atggggcaaa      1320
     tgtgcaatta tttttggtcc ctaggctata aataacacgt cacgaggcgg gtgtagtatt      1380
//