ID AM709505; SV 1; circular; genomic DNA; STD; VRL; 2705 BP. XX AC AM709505; XX DT 07-JAN-2010 (Rel. 103, Created) DT 07-JAN-2010 (Rel. 103, Last updated, Version 1) XX DE Squash leaf curl china virus DNA B, complete sequence XX KW complete viral segment; movement protein; MP gene; NSP gene; KW nuclear shuttle protein. XX OS Squash leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2705 RA Tahir M.; RT ; RL Submitted (20-APR-2007) to the INSDC. RL Tahir M., School of Biological Sciences, University of the Punjab, Lahore, RL 53590, PAKISTAN. XX RN [2] RA Tahir M., Haider M.S., Briddon R.W.; RT "Recombination a tool of new species existence"; RL Unpublished. XX DR MD5; 471dc50c45aaa144a351c4c939ac5463. XX FH Key Location/Qualifiers FH FT source 1..2705 FT /organism="Squash leaf curl China virus" FT /segment="DNA B" FT /host="Momordica charantia" FT /mol_type="genomic DNA" FT /country="Pakistan:Lahore" FT /isolation_source="leaves" FT /collected_by="Muhammad Tahir" FT /collection_date="02-Jul-2004" FT /clone="BGBL22-5" FT /db_xref="taxon:223323" FT CDS 470..1276 FT /gene="NSP" FT /product="nuclear shuttle protein" FT /function="movement between cytoplasm and nucleus" FT /db_xref="GOA:D2N1T5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D2N1T5" FT /protein_id="CAM94793.1" FT /translation="MAFTTPYTAARRYSSSTNRLFNASKKLKFWKSRKYHGLMRYRNVN FT STGRIPTDLFGDPISRQYTRKEICETQQGSEYVLQNNRYMTSYVTYPAKTRTGTDNRVR FT SYIKLTCLTMSGTFGIRCSDLMTDVDQPTGLYGVVSIVIVRDKSPKIYSTAQPLMPFVD FT LFGSVNSCRGTLKVAERHRERFVVLNQSSILINTPHCTAMKKFSVRNCIPRTYSTWVTF FT KDEEEDSSTGLYSNTLRNAILIYYVWLSDVSSQLDMYSNVMLNYIG" FT CDS complement(1330..2175) FT /gene="MP" FT /product="movement protein" FT /function="cell to cell movement" FT /db_xref="GOA:D2N1T6" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D2N1T6" FT /protein_id="CAM94794.1" FT /translation="MSVRNDNMGLGVGGYIESDRVEYALTNDAAEVTLSFPSMFEQKIS FT QLRNRCMKIDHVLLEYRNQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSTYFSVKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRAPRIEIQ FT SKEFTVNDIDFWSVGSKPQTRRPVDGSRLMGHSSRSLRVPHLAIGPNESWASRSEIGMG FT SVTSRPYKNLSGLDESAIDPGPSASQVGSITRDEITEIITKTVEQCMKSNVNAPLTKGV FT " XX SQ Sequence 2705 BP; 768 A; 559 C; 514 G; 864 T; 0 other; accgaaaggc cgcgcaaatt ttttcctcaa atctggccgt tgatttaaac taatgcgcaa 60 cgcgatgaac aacacgtgtc ctctgacaca tcctttatta aagtaaagga ttgtacgatt 120 tcataattcg cacatggtgg aacccattgt ctagatatga aatatctagg aaattgccta 180 agtggtcccc gatataaaaa gctgctgttt tatattgtgt ttgaagtgtg gtcccggtat 240 taattgataa tgcattcgtt accgttgctc tatcatatct agtgtatttt gaacggctga 300 gatcaaaata tgaatttaac catcatctca ccgtccgctc tgtatacatg tttgtaattc 360 gatcaaacat gttttatatt ccatgttttg tgcaaacatt gtactgaatt atatcattat 420 ataattcact ttcgtgcata gtcgttgcca cttctattgt ttgatccaaa tggcttttac 480 tacaccttat actgctgcaa gacgatattc atcatcaaca aacagattat tcaacgcaag 540 caagaaattg aaattttgga agtctcgaaa gtaccatgga ttgatgcgtt atcggaatgt 600 gaattccaca ggcaggatcc caactgacct gttcggtgat cctatctcca gacaatatac 660 gcgtaaggaa atttgtgaaa ctcaacaggg atctgaatat gtcctccaga acaatcgtta 720 tatgacatcg tatgtcactt atcctgctaa aacccgaact ggaactgata acagggtccg 780 ttcatatatc aagctcacat gtcttaccat gtccggaacg ttcggcattc gatgttctga 840 tttgatgacg gatgtcgatc aacccactgg actctatggt gtcgtgtcca ttgttatcgt 900 ccgggataaa tcaccgaaga tttattcaac tgcacaacca cttatgccat ttgttgattt 960 atttggttcg gttaattcct gtcgtggaac tcttaaggtg gcagaacgcc accgagaaag 1020 gtttgtggtg ctgaatcaat cttccatatt gataaatact cctcattgca ccgcaatgaa 1080 gaaattctca gttcgtaact gcatcccgcg cacctactct acctgggtca ctttcaagga 1140 tgaagaagag gatagttcca ccggtctata ctcaaacacg cttcgaaatg caattctcat 1200 atattatgtg tggttaagcg atgtatcttc tcaacttgat atgtacagca atgtaatgtt 1260 aaattacatt ggttagtgca ttcacgatgc tgaaaataac ttccattaat aaattttgca 1320 ataaatttat catacgcctt tagttaatgg ggcgtttaca ttcgatttca tacattgttc 1380 taccgtttta gttattattt cagttatctc gtccctcgta atgcttccca cttgtgatgc 1440 cgatggacct ggatcaattg cggattcatc taatccgctg aggtttttat acggtctgct 1500 ggtgactgaa cccatcccaa tttcagatct acttgcccac gattcgttcg gaccaatcgc 1560 aagatgtggg acgcgtaatg atctagagct gtgacccatg agtcttgatc catctacggg 1620 ccgtcttgtt tgtggtttgg agcccacgga ccagaaatct atgtcgttaa cggtgaattc 1680 tttgctctgt atttctattc ttggtgctcg gaattcgacg tcagtcgaat gtttagccga 1740 ggatagtttt aatttaccaa gcatcttaca gaaatgaact ccattcacta cgttcgtgtt 1800 ctccactctg tactcaactc tccaaggatt tttatcctta acggagaagt acgtggatga 1860 gtagtagtgc agattgcagt tgcattttat cggaattgtg aattctgctt gtttcgtgtc 1920 cccctctgtc aatctcatgt cgtgaatttc aattaccaca tgcccaacag cattaattgg 1980 tacttgattg cgatattcaa gcagaacgtg atcaattttc atgcatctgt ttctcaattg 2040 actgatcttc tgttcgaaca tggaaggaaa tgacaaggtg acctctgcag catcatttgt 2100 gagcgcatat tctacgcgat ccgattctat gtaccctcca acaccaagac ccatgttatc 2160 atttcttact gacattttgg ctgcgcagca gatttggctc cgcaggtgaa taaactatga 2220 aacggatact aaagaaggtt ttgcaaacga acaaaggaca gtttgaaatg aaacacagga 2280 caactgtgtt ttcaaggaac atctaacacc tatttataac cgttcaatta ttgtgttact 2340 tgctccaaag gagtaagaga attgaaatag tgaccgacga tgtatcatat ttatttattt 2400 tgaacgactg agatcaaaat atgaattgct tttaaattgg accattatca taaagcccaa 2460 tttgacaaat tggaaagtga tatatattcc tttgggctat tcagaaaata gcccactaaa 2520 tagttataga gcattccacc aaaataagga caccgtttta agcttattta catggaaagt 2580 tagagagaag tcgcacactc tctctctaga caccgaatcg gagtctctcc aaaactatag 2640 tatattgggg tatggagtct tatatatact atagagaact tcatagcggc ctttcgttta 2700 atatt 2705 //