ID AM701762; SV 1; linear; genomic DNA; STD; VRL; 2758 BP. XX AC AM701762; XX DT 26-JUL-2007 (Rel. 92, Created) DT 26-JUL-2007 (Rel. 92, Last updated, Version 1) XX DE Tobacco leaf curl Comoros virus cp, v2, rep, c2, c3 and c4 genes, isolated DE in Foubouni, Comoros XX KW c2 gene; c3 gene; c4 gene; coat protein; cp gene; rep gene; KW replication associated protein; v2 gene. XX OS Tobacco leaf curl Comoros virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2758 RA Lefeuvre P.; RT ; RL Submitted (25-APR-2007) to the INSDC. RL Lefeuvre P., AMIS, CIRAD - UMR PVBMT, 7 Chemin de l'IRAT, Ligne Paradis, RL Saint Pierre, 97410, REUNION. XX RN [2] RA Lefeuvre P., Martin D.P., Hoareau M., Naze F., Becker N., Delatte H., RA Reynaud B., Lett J.M.; RT "Begomovirus "melting pot" in the South West Indian Ocean Islands: RT molecular diversity and evolution through recombination"; RL Unpublished. XX DR MD5; 6907bcb881be0c72a5cd83c4fd231949. XX FH Key Location/Qualifiers FH FT source 1..2758 FT /organism="Tobacco leaf curl Comoros virus" FT /mol_type="genomic DNA" FT /country="Comoros:Grande Comore, Foubouni" FT /isolation_source="Nicotiana tabacum" FT /db_xref="taxon:439423" FT CDS 92..493 FT /transl_table=1 FT /gene="v2" FT /product="V2 protein" FT /db_xref="GOA:A7DXJ4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A7DXJ4" FT /protein_id="CAM91913.1" FT /translation="MIFVFNILGSQVPVFVSMWDPLLNEFPDSVHGFRCMLAVKYLQAV FT EQTYEPNTLGHDLIRDLICVIRARDYVEATRRYNHFHARLEGSSKAELRQPIYQPCCCP FT HCPRHKQTTVMDLPAQLPKAQNVPDVQKS" FT CDS 303..1079 FT /transl_table=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:A7DXJ5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A7DXJ5" FT /protein_id="CAM91914.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRAAVPIVPGISKRRSW FT TYRPSYRKPRMYRMYRSPDVPRGCEGPCKIQSFDQRDSVVHTGTVRCLSDVTRGGGLTH FT RTGKRFCIKSIYVLGKIWMDENVKKSNHTNTCMFWVVRDRRPYGPSPQDFGQVFNMFDN FT EPSTATVQNDKRDRYQVLRRFQVTVTGGPSGCKEAAIVKRFFRLNHHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYASLKIRMYFYDSVSN" FT CDS complement(1076..1480) FT /transl_table=1 FT /gene="c3" FT /product="C3 protein" FT /db_xref="GOA:A7DXJ6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A7DXJ6" FT /protein_id="CAM91915.1" FT /translation="MDLRTGELITAAQAQSGVFIWEIQNPLYFKIINHDNRPFNMPHDI FT ISIQIRFNHNLRKELGIHKCFLNFKVWTSLRPQTGLFLRVFRTQVLKYLDNMGVISINN FT VIRAVDHVLYDVIVKTLHVQENHQIKFKFY" FT CDS complement(1221..1628) FT /transl_table=1 FT /gene="c2" FT /product="C2 protein" FT /db_xref="GOA:A7DXJ7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A7DXJ7" FT /protein_id="CAM91916.1" FT /translation="MRPSSPSTSHCTQLPIKVQHKISKKKAVRRRRIDLDCGCSYYLHI FT NCIEHGFTHRGTHHCSSSTEWRVYLGDTKSPIFQDYQPRQPAVQHAPRYHIDPDKIQPQ FT FEEGTGDSQMFSQLQGLDELTPSDWSILKGI" FT CDS complement(1537..2613) FT /transl_table=1 FT /gene="rep" FT /product="replication associated protein" FT /db_xref="GOA:A7DXJ8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A7DXJ8" FT /protein_id="CAM91917.1" FT /translation="MRTPRFKIQAKNIFLTYPKCSLSKEHLLSFLQNLSLPTNPKYIKI FT CLEHHQNGEPHLHALIQFEGKLTCTNNRLFDCVHPSSSTSFHPNIQGAKSSSDVKSYLD FT KDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFLSSSFTQVPEELEEWVSENVMDAAARPWRPVSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNAPLKAWATKNATFITIYEPLY FT STANQSSAQNIQEEGSEA" FT CDS complement(2157..2459) FT /transl_table=1 FT /gene="c4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A7DXJ0" FT /protein_id="CAM91918.1" FT /translation="MGNLICMPLFNSRENSRAPTIASSIAYTQAVAPVSTPTYKELSPA FT PTSSPIWTKTETPSNGESFRSMDDLQGGDNNRPTTLTPQLLTQAVSQRLLESLRN" XX SQ Sequence 2758 BP; 701 A; 567 C; 650 G; 840 T; 0 other; accggatggc cgcgcccccg aaaaagcagg tggtccccac gcactagttt ttgtcagcca 60 atcagaaccg ctcgtgaaag gcttaggtta tatgattttt gtctttaata tacttggttc 120 ccaagtacct gtctttgtca gtatgtggga tccacttttg aacgagttcc cagactctgt 180 tcacggattt cgttgtatgc ttgccgtcaa atatttgcag gccgttgagc aaacgtacga 240 gcccaacaca ttgggccacg atctaatacg tgatcttatc tgtgttatta gggctcgaga 300 ctatgtcgaa gcgacccggc gatataatca tttccacgcc cgtctcgaag gttcgtcgaa 360 ggctgaactt cgacagccca tataccaacc gtgctgctgt ccccattgtc ccaggcataa 420 gcaaacgacg gtcatggact taccggccca gttaccgaaa gcccagaatg taccggatgt 480 acagaagtcc tgatgttcct cgtggttgtg agggtccgtg taagatacag tcgtttgatc 540 agcgtgattc cgttgtccat acgggtactg ttagatgtct tagtgatgtc actaggggtg 600 gtggtctgac ccatcgcact ggtaaacgct tttgtattaa gtcgatatat gtattaggta 660 agatctggat ggacgagaac gtgaagaagt ctaaccatac taacacatgt atgttttggg 720 tagttagaga taggcgccct tacggaccta gtccccagga tttcggtcag gtgtttaata 780 tgtttgataa cgagcccagt actgctacgg ttcagaacga taagcgtgat cgttatcaag 840 ttcttcgtag atttcaggta acggtaacgg gaggtccgtc tggatgcaag gaggctgcta 900 ttgttaagag atttttccgt ttgaatcatc atgtgacgta caatcatcaa gaggctgcga 960 agtacgagaa tcatacggag aatgctttat tattgtatat ggcatgtaca catgcctcta 1020 accctgtgta tgcaagtctg aagatacgaa tgtattttta tgattcagtg tcgaattaat 1080 aaaatttgaa ttttatttga tgattctcct gaacatggag tgtttttaca attacatcgt 1140 acaatacatg atcaactgct ctaattacat tgttaattga aattacaccc atgttatcta 1200 aatattttaa aacttgagtc ctaaataccc ttaagaatag accagtctga gggcgtaagc 1260 tcgtccagac cttgaagttg agaaaacatt tgtgaatccc cagttccttc ctcaaattgt 1320 ggttgaatct tatctggatc gatatgatat cgtggggcat gttgaacggc cggttgtcgt 1380 ggttgataat cttgaaatat aggggatttt gtatctccca gataaacacg ccactctgtg 1440 cttgagctgc agtgatgagt tcccctgtgc gtaaatccat gctcgatgca gttgatgtgg 1500 agatagtatg agcagccgca gtcgagatct atccttctac gcctcactgc cttcttcttg 1560 gatattttgt gctgaacttt gattggcagt tgagtacagt ggctcgtaga tggtgatgaa 1620 ggtcgcattc tttgttgccc aggctttcaa gggtgcattc ttatcctcgt ctagatattc 1680 cttataagag gatgttggtc ctggattgca gaggaagatt gtgggaattc cgcctttaat 1740 ttgaattggt ttcccgtact tcgtgttgct ttgccagtcc ctttgggccc ccatgaattc 1800 cttaaagtgc tttaaataat gcgggtctac gtcatcaatg acgttgtacc acgcatcatt 1860 actgtacacc tttgggctta gatccagatg accacacaaa tagttgtggg gtcctaatga 1920 tctggcccac atagtcttcc ccgtcctact atcaccctca ataactatac ttacaggtct 1980 ccacggccgc gcagcggcat ccatgacgtt ctcggaaacc cactcttcaa gttcctccgg 2040 aacttgagta aaagaagaag ataaaaaagg agaaacataa ggagctggtg gctcctgaaa 2100 aatcctatct aaattactat ttaaattatg aaattgtaaa acaaaatctt tgggggctaa 2160 ttccttaatg actctaagag cctctgactt actgcctgcg ttaagagctg cggcgtaagc 2220 gtcgttggcc gattgttgtc ccccccttgc agatcgtcca tcgatctgaa actctcccca 2280 ttcgagggtg tctccgtctt tgtccagata ggacttgacg tcggagctgg acttagctcc 2340 ttgtatgttg gggtggaaac tggtgctact gcttgggtgt acgcaatcga agaggcgatt 2400 gttggtgcac gtgagttttc cctcgaattg aataagggca tgcagatgag gttccccatt 2460 ctggtggtgt tcaaggcaga ttttgatata tttagggttt gttggaagtg aaaggttttg 2520 taagaaggat agaaggtgtt ctttgctaag agaacatttt ggataagtga ggaaaatgtt 2580 tttggcttga attttaaaac gaggagttct catgttgact tggtcaattg gagacactcg 2640 gctgaactct ctctaatgta ttggagacaa tatatagtgt ctccaaatgg catttcggaa 2700 ataaagctca ttgtaatttg aatttttaat ttccaaaagc ggccatccgt ataatatt 2758 //