ID AM691745; SV 1; circular; genomic DNA; STD; VRL; 2747 BP. XX AC AM691745; XX DT 07-JAN-2010 (Rel. 103, Created) DT 25-JUL-2011 (Rel. 109, Last updated, Version 2) XX DE Pepper leaf curl Lahore virus complete genome, clone P1 XX KW C1 gene; C2 gene; C3 gene; C4 gene; V1 gene; V2 gene; REn protein; KW Rep protein; coat protein; TrAP protein; complete genome. XX OS Pepper leaf curl Lahore virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2747 RA Shafiq M.; RT ; RL Submitted (13-APR-2007) to the INSDC. RL Shafiq M., Plant Biotechnology Division, NIBGE, Jhang Road, Faisalabad, PO RL Box 577, PAKISTAN. XX RN [2] RA Shafiq M., Zafar Y., Hussain M., Briddon R.W., Asad S.; RT "Pepper leaf curl Lahore virus requires the DNA B component of Tomato leaf RT curl New Delhi virus to cause leaf curl symptoms"; RL Unpublished. XX DR MD5; 08027cc5d479288cce12d2ae3305397e. DR EuropePMC; PMC3017532; 21144019. XX FH Key Location/Qualifiers FH FT source 1..2747 FT /organism="Pepper leaf curl Lahore virus" FT /host="Capsicum annum" FT /mol_type="genomic DNA" FT /country="Pakistan:Punjab, Faisalabad" FT /isolation_source="leaf" FT /identified_by="Mazhar Hussain" FT /clone="P1" FT /db_xref="taxon:884610" FT CDS 145..510 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:D2N1F9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2N1F9" FT /protein_id="CAM84567.1" FT /translation="MWGPLVNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICQPCCCPHCPRHKGKSMGQQAHES FT EAQDVQDVQEPRCSKGV" FT CDS 305..1075 FT /gene="V1" FT /product="coat protein" FT /function="encapsidation" FT /db_xref="GOA:D2N1G0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D2N1G0" FT /protein_id="CAM84568.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHAMVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSASN" FT CDS complement(1072..1476) FT /gene="C3" FT /product="REn protein" FT /function="replication enhancer" FT /db_xref="GOA:D2N1G1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2N1G1" FT /protein_id="CAM84569.1" FT /translation="MDSRTGEPITAAQAENGVFIWEITNPLYFKITEHHNRPFLRNRDI FT ITVQIQFNHNLRKALGIHKCFLTFRIWTTLQPQTGHFLRVFRTQVLLFLNNLAVISINN FT VIRAVDHVLWHVLAQTIHVQSSHIIKFNLY" FT CDS complement(1217..1621) FT /gene="C2" FT /product="TrAP protein" FT /function="transcriptional activator" FT /db_xref="GOA:D2N1G2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D2N1G2" FT /protein_id="CAM84570.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLDCGCSYFIALR FT CHGYGFTHRGTHHCSSGREWRVYLGDNKSPIFQDNRAPQQAIPEEPRHHHRADTVQSQP FT EESVGDTQMFSNLPNLDDLTASDWSFLKGI" FT CDS complement(1524..2651) FT /gene="C1" FT /product="Rep protein" FT /function="initiation of replication" FT /db_xref="GOA:D2N1G3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2N1G3" FT /protein_id="CAM84571.1" FT /translation="MSPIPQSFECPQFNMTRTQSFCVNAKNIFLTYPKCPIPKEQMLDI FT LRSINCPSDKLFIRVAQEKHQDGSLHIHALIQFKGKSKFRNPRHFDVTHPNNASQFHPN FT FQGAKSSSDVKSYIEKDSDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSAEAALAI FT IREKLPKDFIFQYHNLKSNLDRIFQPPAEVYVSPCCSSSFDQVPPELEEWAAQNVVSAA FT ARPLRPMSIVLEGESRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHY FT LKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKNW FT ALKNATFITLEGPLYSGSNQSATQASQEGDQASSR" FT CDS complement(2195..2452) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2N1G4" FT /protein_id="CAM84572.1" FT /translation="MGLCISTPSSNSKVNPSSETPDISMSLTLITPPNSTQTSRELSPA FT LMSSPTSRRTVITSTGVSFRSMEDLLEEVNRQLMMLQQRP" XX SQ Sequence 2747 BP; 733 A; 571 C; 651 G; 792 T; 0 other; accggatggc cgcgattttt ttatgtgggc cccacaacgc acgtgctgac aaagacatgt 60 ggcccaatta aaaccgcccc tcatagctta attgtttcat ggtcccccct ataaacttgg 120 gctccaagta gtgcactctt accaatgtgg ggtccattag taaacgagtt tcctgaaacc 180 gttcacggtt ttaggtgtat gttagcagtt aaatatctgc agctagtaga aaatacatat 240 tccccagaca ctctgggcta cgatttaatt agggatttaa tttcagttat tagggctaga 300 aattatgtcg aagcgaccag cagatataat catttccacg cccgcttcga aggtacgccg 360 ccgtctcaac ttcgacagcc catatgccag ccgtgctgct gcccccattg tccgcgtcac 420 aaaggcaaga gcatgggcca acaggcccat gaatcggaag cccaggatgt acaggatgta 480 caggagccca gatgttccaa gggggtgtga aggcccatgt aaggtccagt cttttgagtc 540 tagacacgat gtagttcata tagggaaggt tatgtgtatt agtgatgtta cccgtggtac 600 tggtttaacc catagagtag gtaagcgttt ctgtgttaag tctgtgtatg tattagggaa 660 gatatggatg gatgagaata tcaagaccaa gaatcacacg aatagtgtga tgttctttct 720 tgtccgtgat cgtcgtcctg ttgataaacc acaagatttt ggagaggtgt tcaacatgtt 780 tgacaacgag cctagcactg caaccgtgaa gaatatgcat agagatcgtt atcaggtctt 840 gaggaaatgg cacgcaatgg ttactggtgg ccagtacgct tcgaaggaac aggcattagt 900 taagaagttc gttagggtta acaattatgt tgtgtataac cagcaggagg ctggaaaata 960 tgaaaatcac acagagaatg ctctgatgtt gtacatggca tgtactcatg cctctaaccc 1020 tgtgtatgcg acgttgaaga tacggatcta tttctatgat tcagcatcga attaataaag 1080 attgaatttt attatatgtg aactttgtac atgaattgtt tgtgctaata catgccataa 1140 tacatggtcg acagctctaa ttacattgtt tatactaatt acagctaaat tatttaaaaa 1200 cagcaacact tgggtcctaa atacccttaa gaaatgacca gtctgaggct gtaaggtcgt 1260 ccagattcgg aaggttagaa aacatttgtg tatccccaac gctttcctca ggttgtgatt 1320 gaactgtatc tgcacggtga tgatgtctcg gttcctcagg aatggcctgt tgtggtgctc 1380 ggttatcttg aaatataggg gatttgttat ctcccagata aacacgccat tctctgcctg 1440 agctgcagtg atgggttccc ctgtgcgtga atccatagcc gtggcagcgt aatgcgatga 1500 aatatgaaca gccgcaatct aggtcaacgc gacgacgcct ggtccccttc ttggctagcc 1560 tgtgttgcac tttgattgga acctgagtag agtgggcctt cgagggtgat gaaggtcgca 1620 ttctttaaag cccaattttt gagtgcgcta tttttctctt catccaagaa ctctttatag 1680 ctagaattgg gtcctggatt gcagaggaag atagcgggaa ttccaccttt aatttgaact 1740 ggctttccgt attttgtgtt ggattgccag tccctttggg cccccatgaa ttccttaaag 1800 tgctttagat aatgcggatc aacgtcatca atgacgttat accaggcgtc gttattgtag 1860 acctttgggc taaggtcgag atgtccacac aaatagttgt gtggtcccag ggacctggcc 1920 cacattgtct tccccgttct actctcaccc tccaacacta tactcatggg tcttaaaggc 1980 cgcgcagcgg cactgacaac gttctgtgca gcccactcct caagttctgg cggaacttga 2040 tcaaaagaag aagaacaaca aggagaaaca taaacctccg ctggaggttg aaaaatccta 2100 tctaaattag attttaaatt atgatattga aaaataaaat ctttggggag tttctccctt 2160 attattgcta aagctgcttc agccgaaccc gcatttaagg cctctgctgc agcatcatta 2220 gctgtctgtt gacctcctcg agcagatctt ccatcgatct gaaactgacc ccagtcgatg 2280 taatcactgt ccttctcgat gtaggacttg acatcagagc tggacttagc tccctggaag 2340 tttgggtgga attgggaggc gttattaggg tgagtgacat cgaaatgtct ggggtttctg 2400 aacttggatt tacctttgaa ttggatgagg gcgtggatat gcagagaccc atcctggtgt 2460 ttctcttgtg ccactctgat aaatagttta tcagatgggc aatttatcga ccgaagaatg 2520 tcgagcattt gttctttggg tattgggcat ttgggataag taaggaagat attttttgca 2580 ttaacacaaa acgactgcgt acgagtcata ttgaattggg gacactcaaa actctgagga 2640 atgggggaca ttggggacgc atatatatgg tgtccccaaa tggcaaattg gtaatttgca 2700 caactttaat tcaaataccc gataatcgcg gccatccgta taatatt 2747 //