ID   AM503617; SV 2; linear; genomic RNA; STD; VRL; 1248 BP.
XX
AC   AM503617;
XX
DT   23-MAR-2009 (Rel. 100, Created)
DT   08-MAY-2009 (Rel. 100, Last updated, Version 2)
XX
DE   Potato mop-top virus partial cprt gene for cp readthrough protein, genomic
DE   RNA, isolate 2505
XX
KW   coat protein; cp gene; cp readthrough protein; cprt gene.
XX
OS   Potato mop-top virus
OC   Viruses; Riboviria; Virgaviridae; Pomovirus.
XX
RN   [1]
RC   revised by author [14-AUG-2008]
RP   1-1248
RA   Aura J.M.;
RT   ;
RL   Submitted (21-MAR-2007) to the INSDC.
RL   Aura J.M., Department of Applied Biology, University of Helsinki, PO Box
RL   27, 00014 Helsinki, FINLAND.
XX
RN   [2]
RA   Latvala-Kilby S., Aura J.M., Pupola N., Hannukkala A., Valkonen J.P.T.;
RT   "Genetic variability of Potato mop-top virus in Finland and Latvia";
RL   Unpublished.
XX
DR   MD5; 228e4dc51d722d99a7eefb1acb06bebc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1248
FT                   /organism="Potato mop-top virus"
FT                   /isolate="2505"
FT                   /mol_type="genomic RNA"
FT                   /country="Finland"
FT                   /db_xref="taxon:37128"
FT   CDS             <1..>1248
FT                   /codon_start=2
FT                   /transl_except=(pos:551..553,aa:OTHER)
FT                   /gene="cprt"
FT                   /product="cp readthrough protein"
FT                   /db_xref="GOA:C0H5S0"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="UniProtKB/TrEMBL:C0H5S0"
FT                   /protein_id="CAM78298.2"
FT                   /translation="VCLPPLEMAENRGERRAAVENRYDSWDHEQAMKAAVRKFISYDQF
FT                   SAQLRNWREARLNIIEHATSVLSQVSNLGRTHFYSRTERFGGSSLVGDKLYVCLNETRM
FT                   KTALNNIIVALQTVNGEGRARRLGPREASANTGGEDSALNVAHQLAEVDDLLTDESFLR
FT                   EAVFTQDKYELVNGLRWAGAXQLTAQAFWFDVNAAIDEIDNRLLAAAALRLLPGQANHV
FT                   DGLVSINYAQLDRALSVVGGNILPQTLEITRDERKRQLHEVRVIDGERVTIRNKDEATV
FT                   IRNHGQGLPWLLAFLLLLLSVVVVYSTIYLNDWLYRLSVVRHGKPGGGAARKLSGMSDW
FT                   LCSRLRARGALNVSRMRKKQACDPSPTGLRKFLTCYNFSYELWDPTGSYDDAQRRIIAE
FT                   QNSFVEAVRAIDEGDR"
FT   mat_peptide     23..550
FT                   /gene="cp"
FT                   /product="coat protein"
XX
SQ   Sequence 1248 BP; 333 A; 220 C; 364 G; 331 T; 0 other;
     ggtttgttta ccacccttgg aaatggctga aaacagaggt gagcgaagag cagccgtcga        60
     gaatagatat gactcttggg accatgagca ggccatgaag gctgccgtga ggaagtttat       120
     ttcttacgat caattctcag ctcagttaag aaactggcgc gaagctaggt taaacataat       180
     tgaacatgcc actagcgtgt tgagccaggt gtctaattta ggtagaactc atttctacag       240
     tagaaccgaa cgctttggtg gaagttcact tgttggtgat aaattgtacg tatgtctgaa       300
     tgaaaccaga atgaaaaccg cgttgaataa tataattgta gcgttgcaga cagtgaacgg       360
     cgaagggcgg gcaagacgat taggtccgag agaagcttcc gcgaacaccg gcggggagga       420
     tagcgctctg aatgtggcac atcaactcgc agaggtggac gatttattaa ctgatgaaag       480
     ttttttaaga gaagctgttt ttactcagga caaatatgag ctcgtgaacg ggttacgctg       540
     ggctggtgca tagcaattaa ccgctcaggc tttttggttt gacgtcaacg ccgctatcga       600
     cgaaattgat aatcgactgc tggcggcggc tgcgttaaga ctattgcctg ggcaggcaaa       660
     tcacgtggat ggtttagtgt ctataaatta cgcacaattg gatagagcat tgagtgttgt       720
     tggtgggaat attttacctc agacgttgga gataactcgt gacgaaagaa aaaggcaatt       780
     acatgaggtc agagttatcg acggcgagcg tgtcactatt cgtaacaagg atgaggcgac       840
     ggtcattagg aatcatggtc agggacttcc ttggctatta gcgtttttac tgttgctgtt       900
     atctgttgta gtggtgtatt ctacaatata cctgaacgac tggttgtatc ggttaagtgt       960
     ggtaaggcat gggaaacctg gcggtggtgc agctcgtaag ctgtcgggta tgtcggactg      1020
     gttgtgcagt cgcttaaggg ccagaggcgc tttgaatgtg agtaggatga ggaagaaaca      1080
     agcatgcgat ccgtcgccca ctgggttgcg gaagttcctt acttgttata acttttctta      1140
     tgaactttgg gatcctactg gtagttatga cgatgcgcag cggagaatta tagcggaaca      1200
     gaattcgttt gtggaagccg tgagggccat agatgaaggt gacaggga                   1248
//