ID AM502340; SV 1; circular; genomic DNA; STD; VRL; 2780 BP. XX AC AM502340; XX DT 17-JUN-2007 (Rel. 92, Created) DT 17-JUN-2007 (Rel. 92, Last updated, Version 1) XX DE African cassava mosaic virus DNA-A, clone wcass4-3 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein. XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2780 RA Stanley J.; RT ; RL Submitted (16-MAR-2007) to the INSDC. RL Stanley J., Department of Disease and Stress Biology, John Innes Centre, RL Colney Lane, Norwich NR74 7UH, UNITED KINGDOM. XX RN [2] RA Sserubombwe W.S., Briddon R.W., Baguma Y.K., Ssemakula G.N., Bull S., RA Bua A., Otim-Nape G.W., Stanley J.; RT "Diversity of begomoviruses associated with mosaic disease of cultivated RT cassava (Manihot esculenta Cranz) and its wild relative (Manihot glaziovii) RT in Uganda."; RL Unpublished. XX DR MD5; 73f122a9c8a6ce2fdeb6ee774aab2ce3. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="African cassava mosaic virus" FT /host="Manihot glaziovii" FT /mol_type="genomic DNA" FT /country="Uganda:Rakai" FT /clone="wcass4-3" FT /db_xref="taxon:10817" FT CDS 135..476 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q58WK5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q58WK5" FT /protein_id="CAM59429.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT VSVIRARNYVEATRRYHHFHSRLQGASKTELRQPIQEPCYCPHCPRHKSKTGLDEQAHV FT QKAHDVQDV" FT CDS 295..1071 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A6H331" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A6H331" FT /protein_id="CAM59430.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENVKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYV FT NHTENALLVYMACTHASNPVYATLKIRIYFYDSIGN" FT CDS complement(1068..1472) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:A6H332" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A6H332" FT /protein_id="CAM59431.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHLQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLDFQIWTTLQPQTGLFLRVFRYQVIKYLDNIGVISINN FT VIRAADHVLFNVIANTIECQLTHEIKFNVY" FT CDS complement(1213..1620) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:A6H333" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6H333" FT /protein_id="CAM59432.1" FT /translation="MQSSSPSQNHSTQVPIKVNHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTLPAEPGHHNSPGSIQSQ FT PEEGAGDSQMFSRLPDLDDLTASDWSFLKGL" FT CDS complement(1529..2605) FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:A6H334" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A6H334" FT /protein_id="CAM59433.1" FT /translation="MRTPRFRIQAKNVFLTYPKCSLPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFDPKITITNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPVEIEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEERQEALKAWALKNAIFITLTEPLY FT SGSNQSQSQTIQEARHPA" FT CDS complement(2161..2571) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A6H335" FT /protein_id="CAM59434.1" FT /translation="MSFSHTQSVLYPKNTYCHSFKHSLSHQTLSSLKSVESCIRMGNLT FT CMPSSNSTPKSRLRTIVSSIVYTQAVAPVSTPTFKVPNQAQMSSPIWIRTETPSNGDNF FT RSMDDLLEADNNQRMMLTPKRLTAAVSQKLLM" XX SQ Sequence 2780 BP; 744 A; 552 C; 694 G; 790 T; 0 other; accggttggc cccgccccct ttaatgtggt ccccgcgcac atacgtatgt cggccaatca 60 tgtagtagct gtaaaggttg tgtattagtg gtgggccact atatacttgc aggcgaagtt 120 gtggctagtg cgcaatgtgg gatccactgg tgaatgagtt tccagactcg gtgcatgggc 180 ttaggtgtat gcttgcaatt aaatatttgc aggccttaga ggatacatac gagcccagta 240 ctttgggcca cgatctggtt agggatctag tctcagttat cagggctcgt aattatgtcg 300 aagcgaccag gagatatcat catttccact ccaggctcca aggtgcgtcg aagactgaac 360 ttcgacagcc catacaggaa ccgtgctact gcccccactg tccacgtcac aaatcgaaaa 420 cgggcctgga tgaacaggcc catgtacaga aagcccatga tgtacaggat gtatagaagc 480 ccagacatac ctaggggctg tgaaggccca tgtaaggtcc agtcgtttga gcagagggat 540 gatgtgaagc accttggtat ctgtaaggtg attagtgatg tgacgcgtgg gcctgggctg 600 acacacaggg tcggaaagag gttttgtatc aagtccattt acattcttgg taagatctgg 660 atggatgaaa atgttaagaa gcagaatcac actaataatg tgatttttta cctgcttagg 720 gatagaaggc cttatggcaa tgcgccccaa gactttgggc agatatttaa catgtttgat 780 aatgagccca gtactgcaac aattaagaac gatttgaggg ataggtttca ggtgttgagg 840 aaatttcatg ccactgtcgt tggtggtcca tctggcatga aggagcaggc gttggtgaaa 900 aggttttaca ggttgaatca tcacgtgaca tacaatcatc aggaggcagg gaagtatgtg 960 aatcacacag agaatgcttt gcttgtgtac atggcatgta ctcatgcctc caatcctgta 1020 tatgcgacgt tgaaaatacg tatatacttc tatgacagta ttggcaatta ataaacattg 1080 aattttattt catgagtcaa ctgacactca atagtgttgg caattacatt gaacaaaaca 1140 tgatcagcag ctctaattac attattaatt gagataacac ctatattatc caagtattta 1200 attacttggt atctaaagac ccttaagaaa agaccagtct gaggctgtaa ggtcgtccag 1260 atctggaagt cgagaaaaca tttgtgaatc cccagctcct tcctcaggtt gtgattgaat 1320 cgaacctgga ctgttatgat gtcctggttc agcaggaagg gtcgttgtag gtgcctggtg 1380 attgtgaaat acaggggatt gtttatttcc caggtataca cgccattcat tgcttgagga 1440 gcagtgatga gttcccctgt gcgtaaatcc atgattggag cagttgatat ggaggtaata 1500 tgaacagcca cagacaagat ccactctcct acgccggatg gcgcgcttct tgaattgtct 1560 gtgattgact ttgattggaa cctgagtaga gtggttctgt gagggtgatg aagattgcat 1620 tctttaatgc ccaggccttt agcgcttctt gcctttcctc gtctaggaac tctttatagg 1680 acgaggtagg tcctggattg cagaggaaga tagtgggaat tccaccttta atttgaacgg 1740 gtttcccgta tttcgtgttg gattgccagt ccctctggga ccccataaat tccttaaagt 1800 gctttaggta gtggggatcg acgtcatcaa tgacgttgta ccaggcagca ttattgaaga 1860 cctttggact aaggtccagg tgtccacaca ggtaattgtg tgggcctaaa gatctggccc 1920 atatcgtctt ccctgttctg ctatcacctt ctatgacaat actattgggt ctccatggcc 1980 gcgcagcgga atccctaaca ttatcagcga cccattcttc aatttcaaca ggaacttggt 2040 caaaggaaga acatgggaag ggagaaacat aaggagccgg tggctcctgg aaaatcctat 2100 ctaaattact atttagatta tgaaactgaa gtacaaagtc ctttgggact aattccctaa 2160 ttacattaag agcttctgac ttactgccgc tgttaagcgc tttggcgtaa gcatcattcg 2220 ctgattgttg tccgcctcga gcagatcgtc catcgatctg aaattgtccc cattcgacgg 2280 tgtctccgtc cttatccaga taggacttga catctgagct tgatttggca ccttgaatgt 2340 tggggtggaa actggtgcta cagcttgggt gtacacaatc gaagagacga ttgttcgtaa 2400 tcgtgatttt ggggtcgaat tggatgaggg catgcaagtg aggttcccca ttctgatgca 2460 gctctctaca gattttaatg aacttagggt ttgatgggag agagagtgtt tgaatgaatg 2520 acagtaggtg ttctttgggt aaagaacact ttgggtatgt gagaaagaca ttcttggctt 2580 gaattctaaa acgaggagtt ctcatgttga ccaagtcaat tggagacact caactagaga 2640 cactcttgag catctcctcc tgttaattgg agacattata taggtgtctc taaatggcat 2700 tcttgtaata agttgaactt taatttgaat taaaaggttc aaaaggctca gaacacccaa 2760 ggggccaacc gtataatatt 2780 //