Dbfetch
ID AM502330; SV 1; circular; genomic DNA; STD; VRL; 2799 BP. XX AC AM502330; XX DT 17-JUN-2007 (Rel. 92, Created) DT 17-JUN-2007 (Rel. 92, Last updated, Version 1) XX DE East African cassava mosaic virus DNA-A, clone 27-ug237-2 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein. XX OS East African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2799 RA Stanley J.; RT ; RL Submitted (16-MAR-2007) to the INSDC. RL Stanley J., Department of Disease and Stress Biology, John Innes Centre, RL Colney Lane, Norwich NR74 7UH, UNITED KINGDOM. XX RN [2] RA Sserubombwe W.S., Briddon R.W., Baguma Y.K., Ssemakula G.N., Bull S., RA Bua A., Otim-Nape G.W., Stanley J.; RT "Diversity of begomoviruses associated with mosaic disease of cultivated RT cassava (Manihot esculenta Cranz) and its wild relative (Manihot glaziovii) RT in Uganda."; RL Unpublished. XX DR MD5; d9f19396ab91d1cdf72cbf001718b75d. XX FH Key Location/Qualifiers FH FT source 1..2799 FT /organism="East African cassava mosaic virus" FT /mol_type="genomic DNA" FT /country="Uganda:Kalangala" FT /clone="27-ug237-2" FT /db_xref="taxon:62079" FT CDS 172..528 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A0A3S5ZP69" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A0A3S5ZP69" FT /protein_id="CAM59369.1" FT /translation="MWDPLVNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKNYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT ETQDVQNVSKPRCP" FT CDS 332..1105 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A0A3S5ZPD2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0A3S5ZPD2" FT /protein_id="CAM59370.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTHR FT VGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNAPQDFGQIFNMFDNE FT PSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYKLNHHVTYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1102..1506) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:A6H2X2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A6H2X2" FT /protein_id="CAM59371.1" FT /translation="MDSRTGELITAPQARNGVFTWDITNPLYFEITDHDKRPGNMNHDI FT ITLQIRFNHNLRKALGIHKCFLNFKIWTTLRPQTGRFLRVFRYQVLKYLDMIGVISINT FT VLQAVDHVVYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1247..1654) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:A6H2X3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6H2X3" FT /protein_id="CAM59372.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGHNKSPLFRNHRPRQKAREHEPRHHHTPDTVQPQ FT PSEGIGDSQVFSQLQDLDDLTASDWSFLKSI" FT CDS complement(1563..2642) FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:A6H2X4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A6H2X4" FT /protein_id="CAM59373.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLQALSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDAGLFQVDARSARGEGQHLAQVYADALNASSKSEASSIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEDTEVWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSEDQGRQT" FT CDS complement(2252..2485) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A6H2X5" FT /protein_id="CAM59374.1" FT /translation="MGCLISMFSSNSKASSNVPTRDSSISFPHPDQHISIRTFRALNHR FT PMSKLTLKREGNFLTLDFSKSMPEVQEERASI" XX SQ Sequence 2799 BP; 729 A; 543 C; 732 G; 795 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacaa tgaccgcgcc cgtgaaagaa 60 agtggtccct gcgcacttgt tttggtcggc cagtcatatt cacgcgtgaa agtctagata 120 tttgttgttt gtctttatag acttcgtcgc gaagtagtag agcgcgtcaa catgtgggat 180 ccattggtga acgattttcc cgaaaccgtt cacggtttcc gttctatgct tgctgttaaa 240 tacctgttac atctggaaca ggaatacgat cgcggtactg ttggggctga gtatatacgg 300 gatctaatag gggttctacg gtgtaagaat tatgtcgaag cgaccaggag atataataat 360 ctcaacaccc gtatccaagg tgcggaggag gctgaacttc gacagcccat acacgaaccg 420 tgttgttgcc cccactgtcc gcgtcaccag aagcaaaata tgggccaaca ggcccatgta 480 tcggaaaccc aagatgtaca gaatgtatcg aagcccagat gtccctaagg gctgtgaagg 540 cccatgtaag gtccagtcgt ttgagcagag ggatgatgtg aagcaccttg gtatctgtaa 600 ggtgatcagt gatgtgacgc gtgggcctgg gctgacacac agggtcggaa agaggttttg 660 tatcaagtcc atttacattc ttggtaagat ctggatggat gaaaatatta agaagcagaa 720 tcacactaat aatgtgatgt tttacctgct tagggataga aggccgtatg gcaatgcgcc 780 ccaagacttt gggcagatat ttaacatgtt tgataatgag cccagtactg caacaattaa 840 gaacgatttg agggataggt tccaggtgtt gaggaaattt catgccactg ttgttggtgg 900 tccatctggc atgaaggagc aggcgttggt gaaaaggttt tacaagttga atcatcatgt 960 gacatataat catcaggagg cagggaagta tgagaatcac acagagaatg cgttgttatt 1020 gtatatggca tgtacacatg cctcgaatcc tgtgtatgct acgctgaaaa tacgcatcta 1080 tttttatgat gcagtgacaa attaataaag gttgaatttt attgcatgtt gctccgtaac 1140 ttggagtgtg tttagtaata catcgtacac aacatgatca acagcttgaa ggacagtgtt 1200 aatggaaata acgcctatca tatctaaata cttgagcact tgatatctaa atactcttaa 1260 gaaacgacca gtctgaggcc gtaaggtcgt ccagatcttg aagttgagaa aacacttgtg 1320 aatccccaat gccttccgaa ggttgtggtt gaaccgtatc tggagtgtga tgatgtcgtg 1380 gttcatgttc cctggccttt tgtcgtggtc ggtgatttcg aaatagaggg gatttgttat 1440 gtcccaggta aaaacgccat tccttgcttg aggcgcagtg atgagttccc ctgtgcgaga 1500 atccatggtt gatgcagtcg atatggagat agaacgagca gccgcattcg aggtctaccc 1560 gcctacgtct gacggccctg gtcttcgctg tgcggtgttg gactttgatg ggcactagag 1620 aacaatggct cgtggagggt gatgaaggtg gcattcttta aagcccaggc tttaagggat 1680 tggttctttt cttcgtccag aaactcttta tatgatgatg ttggtcctgg attgcagagg 1740 aagatagtgg gaatgccgcc tttaatttga attggcttcc cgtattttgt attgctttgc 1800 cagtctcttt gggcccccat gaattctttg aagtgtttga ggtagtgggg gtcgacgtca 1860 tcaatgacgt tgtaccaggc gtcgtttgaa tataccttgg gagacagatc caggtgtcca 1920 caaagataat tatggggtcc cagtgaacga gcccacattg ttttgccggt tcggctatca 1980 ccttctagaa caatactgat cggtctccat ggccgcgcag cgggactgca tatattttcg 2040 gatacccata cctctgtgtc ttctgggact tgtgtaaaag atgatgataa gaacggacta 2100 acgtaagttt gtggcggagc ctggaagatt ctatctgcgt tagcagatat gttatggaac 2160 tgtaaaaaaa aagactttgg atctttttct ttaataattg aagaggcctc ggatttagac 2220 gaagcattca acgcgtctgc atatacctga gctaaatgct ggccctctcc tcttgcactt 2280 ctggcatcga cttggaaaag tccagcgtca agaaattccc ctcccttttc aatgtaagct 2340 ttgacatcgg acgatgattt agcgccctga atgttcggat ggaaatgtgt tgatcgggat 2400 ggggaaatga gatcgaagaa tctcgggttg gtacattgga acttgccttc gaattggatg 2460 agaacatgga gatgaggcac cccatcctga tgtagttctc tgcaaaccct aatgaatttg 2520 atattcgtcg ggtacgaaag ggcttgtaat tgggaaaggg cctcttcttt tgttaatgag 2580 catcggggat aggttatgaa ataatttttg gcatttattt gaaaacgacc ggctcttggc 2640 atattggctg tcgttttgga tcgggggaca ctcaaagtct gtagcaatcg gtggaatggg 2700 gggcattata tatgatgtcc cccaatggca tatgtgtaaa taggtagact ttcatttaaa 2760 atttgaattc cgaatattgg cggccatccg attaatatt 2799 //