ID AM494976; SV 1; circular; genomic DNA; STD; VRL; 2756 BP. XX AC AM494976; XX DT 07-JAN-2010 (Rel. 103, Created) DT 07-JAN-2010 (Rel. 103, Last updated, Version 1) XX DE Melon leaf curl virus DNA-A, complete segment XX KW AV2 gene; C4 gene; C5 gene; coat protein; complete viral segment; CP gene; KW REn gene; Rep gene; replication associated protein; replication enhancer; KW transcriptional activator protein; TrAP gene. XX OS Melon leaf curl virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2756 RA Malik A.H.; RT ; RL Submitted (28-FEB-2007) to the INSDC. RL Malik A.H., Plant Biotechnology Division, NIBGE, Jhang Road, Faisalabad, RL PO. Box 577, PAKISTAN. XX RN [2] RA Malik A.H.; RT "Melon leaf curl virus from Pakistan"; RL Unpublished. XX DR MD5; df18c0be6aefa74bcc7663647ea2c269. XX FH Key Location/Qualifiers FH FT source 1..2756 FT /organism="Melon leaf curl virus" FT /segment="DNA-A" FT /host="Cucumis melo" FT /mol_type="genomic DNA" FT /country="Pakistan:Punjab" FT /isolation_source="leaf" FT /collection_date="Jun-2005" FT /clone="MLA" FT /db_xref="taxon:429321" FT CDS 120..467 FT /transl_table=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:D2N140" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2N140" FT /protein_id="CAM56756.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLKEIEKTYSPDTIGYDLVRDL FT ISVVRARNYGEASSRYLHFNARIESTPSSELRQPVCCPCSCPYCPRHKGKGMGEQTHEP FT ETKILPDVSKL" FT CDS 280..1050 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:D2N141" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D2N141" FT /protein_id="CAM56757.1" FT /translation="MVKRPADIYISTPASKARRRLNFDSPYAVRAAVPIVRATKAREWV FT NRPMNRKPRFYRMYRSSDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTYSVMFFLVRDRRPTGAPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLKKWHSTVTGGTYASKEQALVRRFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHPSNPVYATLKIRIYFYDSVTN" FT CDS complement(310..828) FT /transl_table=1 FT /gene="C5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:D2N142" FT /protein_id="CAM56758.1" FT /translation="MPFFEHLISITMHILHGCSARFVVEHIKNFAEILWRTRRSTITHQ FT EKHHTIRVVLGLDILIHPDLTQNINGLHTESLSDAMCETGSTGNVANTHDLTNMRDIVP FT RLKRLHLTWTFTAPGHVRASIHPVKSWFPVHGSVHPFPCLCGADNRDSCTDSIRAVEVQ FT TTACFRCGR" FT CDS complement(1047..1457) FT /transl_table=1 FT /gene="REn" FT /product="replication enhancer" FT /db_xref="GOA:D2N143" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2N143" FT /protein_id="CAM56759.1" FT /translation="MITDSRTGEYITADRAESGVFIWDVPNPLYFKILKHDERPCLTNH FT DIITVQIQFNHNLRKALGLHKCFLTFQIWTGLRPQTGRFLRVFRTQVLRYLDMLGVIGI FT YNVIRAAYHVLDNVLERTVDVWTTYDVKLNTY" FT CDS complement(1177..1596) FT /transl_table=1 FT /gene="TrAP" FT /product="transcriptional activator protein" FT /function="activation of the viron sense promotor" FT /db_xref="GOA:D2N144" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D2N144" FT /protein_id="CAM56760.1" FT /translation="MQSSLHSKGHSIPVAKTSLPHKKKKNIRRRRVDLQCGCSYYISIN FT CHDHGFTHRGIHHCGSSREWRVYLGRSKSPVFQNFETRRETLPNEPRHYNSPNTVQPQP FT EESTGASQVFSNIPDLDGLTPSDWAFLESFQNPGP" FT CDS complement(1499..2602) FT /transl_table=1 FT /gene="Rep" FT /product="replication associated protein" FT /function="initiation of rolling circle initiation" FT /db_xref="GOA:D2N145" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2N145" FT /protein_id="CAM56761.1" FT /translation="MAPPTRFRINAKNYFLTYPKCSLTKEEALSQLQNLETPTSKKFIK FT ICRELHGDGSPHIHVLIQFEGKFQCKNNRFFDLVAPSRSAHFHPNIQGAKSASDVKTYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKEDALKVLKELAPKDYVLQFH FT NLMTNLDRIFPSRIEVYRSPFNVSSFDRVPPELVDWVSSNLRCSAARPFSAALPIRPIG FT LVLEGDSRTGKTMWARSLGPHNYLCGHLDLNPRVYSNDALYNVIDDVDPHYLKHFKEFM FT GAQRDWQSNTKYGKPMMIKGGIPTIFLCNKGPQSSYKEFLDEEKNAALKQWALKNAVFI FT TLEGPLYSGRENVAPTQEEEEHPQETS" FT CDS complement(2269..2445) FT /transl_table=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2N146" FT /protein_id="CAM56762.1" FT /translation="MGLRISMFSSNLKENSSAKITDSSTWLPQVGQHISIRTFRELNQR FT QMSKHTSTKTETF" XX SQ Sequence 2756 BP; 737 A; 589 C; 613 G; 817 T; 0 other; accgaatggc cgcggtgcct tttgtgtggg tccagaacca atgaaattcg agatacatgg 60 cttatttaat gcgtggggac caataaatag acttgctcac caagcttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttcctg aaagcgttca tggtcttagg tgcatgctag 180 ctgtaaaata tctcaaagag atagaaaaga cctattctcc ggacacaatc ggatacgatc 240 ttgttcgtga cctaatctct gtcgtccgtg ccagaaacta tggtgaagcg tccagcagat 300 atctacattt caacgcccgc atcgaaagca cgccgtcgtc tgaacttcga cagcccgtat 360 gctgtccgtg cagctgtccc tattgtccgc gccacaaagg caagggaatg ggtgaacaga 420 cccatgaacc ggaaaccaag attttaccgg atgtatcgaa gctctgacgt gcccaggggc 480 tgtgaaggtc catgtaaggt gcaatctttt gagtctaggc acgatgtctc tcatattggt 540 aaggtcatgt gtattagcga cgttacccgt ggaaccggtc tcacacatcg cgtcggaaag 600 cgattctgtg tgaagtccgt ttatgttctg ggtaagatct ggatggatga gaatatcaag 660 accaagaacc acacgtatag tgtgatgttt ttcttggtgc gtgatcgtcg acctacgggt 720 gcgccacaag atttcggcga agtttttaat atgttcgaca acgaacctag cactgcaacc 780 gtgaagaata tgcatcgtga tcgatatcaa gtgctcaaaa aatggcattc gactgttacg 840 ggaggaacat acgcgtcgaa ggaacaagca ttagttagac gttttgttag agttaataat 900 tatgttgtat ataatcaaca agaggccggc aagtatgaga atcatactga aaatgcatta 960 atgttgtata tggcctgtac tcatccatca aatcctgtat atgcgacttt aaaaatccgg 1020 atctattttt atgattcggt aacaaattaa tatgtattaa gttttacatc atatgttgtc 1080 catacatcaa ctgttctttc caatacattg tctaatacat gataagctgc tcttattaca 1140 ttataaattc ctataacacc tagcatatcc aggtacctaa ggacctgggt tctgaaaact 1200 ctcaagaaac gcccagtctg agggcgtaag cccgtccaga tctggaatgt tagaaaacac 1260 ttgtgaagcc ccagtgcttt cctcaggttg tggttgaact gtatttggac tgttataatg 1320 tcgtggttcg ttaggcaagg tctctcgtcg tgtttcaaaa ttttgaaata caggggattt 1380 ggaacgtccc agataaacac gccactctct gctcgatccg cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatgtaatac gaacaaccac actgcagatc 1500 aactcgtctc ctgcggatgt tcttcttctt cttgtgtggg agcgacgttt tcgcgaccgg 1560 aatagagtgg cccttcgagt gtaatgaaga ctgcattctt taatgcccac tgcttgagtg 1620 ctgcattctt ttcttcgtcc aagaattctt tatagctgct ttgtggtcct ttattgcaca 1680 agaagatagt gggaatgcct cctttaatca tcatcggctt tccgtatttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaaatgctt tagatagtgg ggatcaacgt 1800 catcaatgac gttgtataaa gcgtcgttac tgtaaaccct agggtttaga tccaagtgac 1860 cgcacaagta attgtggggt cccaaactac gcgcccacat tgttttgccc gtacgactat 1920 cgccctccaa gactaaccct atgggtctaa ttgggagcgc agcggaaaaa ggccgcgcag 1980 cggaacacct caaatttgac gacacccaat cgacgagttc tggcggaact ctgtcgaagg 2040 acgaaacatt aaatggcgaa cgataaactt caattcgtga aggaaaaatg cgatctaaat 2100 tcgtcattaa attgtgaaac tgcaacacat aatcctttgg tgctaattcc tttagcacct 2160 ttaatgcgtc ttctttattt ccagtattaa ttgcttgtgc gtaagcatcg ttagctgttt 2220 gttgaccacc acgagcagat cgtccatcga tctggaaaac accccactct agaacgtctc 2280 cgtctttgtc gatgtatgtt ttgacatctg acgctgattt agctccctga atgttcggat 2340 ggaaatgtgc tgaccgactt ggggcaacca agtcgaagaa tctgttattt ttgcactgga 2400 attttccttc aaattggatg agaacatgga tatgcggaga cccatctccg tgaagctctc 2460 tgcagatttt tatgaatttc tttgatgtag gggtttctag gttttgtaat tgggaaagtg 2520 cctcttcttt agttagagag cactttggat atgtaaggaa atagtttttt gcatttattc 2580 tgaaacgagt tggcggagcc ataaacctcg aatttccaac cggtgtctct caacttcttg 2640 tattatattg gtgtctgggg tcctatatat acataagact ctaaatggca taattgtaat 2700 tttagggata aaattacttt aattcaaact cctatagcgg ccattcgtat aatatt 2756 //