Dbfetch
ID AM412237; SV 1; linear; genomic RNA; STD; VRL; 6117 BP. XX AC AM412237; XX DT 17-JUN-2008 (Rel. 96, Created) DT 23-JUN-2008 (Rel. 96, Last updated, Version 2) XX DE Poinsettia mosaic virus gene for polyprotein, isolate Norwegian 1, genomic DE RNA XX KW polyprotein. XX OS Poinsettia mosaic virus OC Viruses; Riboviria; Tymovirales; Tymoviridae. XX RN [1] RP 1-6117 RA Spetz C.J.; RT ; RL Submitted (27-JUN-2006) to the INSDC. RL Spetz C.J., Plant Protection, Bioforsk, Hogskoleveien 7, Aas 1432, NORWAY. XX RN [2] RX DOI; 10.1007/s00705-008-0109-7. RX PUBMED; 18504521. RA Spetz C., Moe R., Blystad D.R.; RT "Symptomless infectious cDNA clone of a Norwegian isolate of Poinsettia RT mosaic virus"; RL Arch. Virol. 153(7):1347-1351(2008). XX DR MD5; 63c3516285f064f17c06c1994a837437. XX FH Key Location/Qualifiers FH FT source 1..6117 FT /organism="Poinsettia mosaic virus" FT /isolate="Norwegian 1" FT /mol_type="genomic RNA" FT /db_xref="taxon:113553" FT CDS 82..6018 FT /product="polyprotein" FT /db_xref="GOA:B3KYD8" FT /db_xref="InterPro:IPR000574" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008043" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B3KYD8" FT /protein_id="CAL80776.1" FT /translation="MAFQDAINNLSSTVHRDTVAAPLLESIAQPLRDSLQLYPWAINAE FT KLDLLKKFGISVSGLGHQAHPHPFHKIIETHLLFQHWSHNCREDSTVLFMKPEKFQKLA FT SFNPHFKHLLNYRLHAKDTTRYPETACSLPTTSTVFMHDALMYYKPSQIMDLFLRIPDL FT NNLYASVVVPAESSFTDQSLYPEVYQYKTIRSHLHYVPESNHSSAYNQPADALLWLELS FT TIQGPSFSLTVTRLDSWGPCHSLLIQRGIPPAHVVNDFVSFDVPAAVLLPEATSIRQPT FT RHRLVPQSVYNALFTYTRAVRTLRISDPVGFVRTQSNKPEHAWVTSSAWDNLQHFSLLT FT ASNRPSNSYSWNGSLWQRFISRLQTVAAELKSSAIFTSSITTFLFSLLFQYFRRKSATS FT RSLPSDLGFRNLDEHVKLHEALLRAGFSYTHTSQTRQGPRGFYHRAAERFKFMSALVRS FT ISLSLPLLAFAIYSKCTQPMPPQSLHDSYHNYHHPSRWVLGWSRRLTVVTPEAFLPFEP FT VPIPAVQSPPPWTPAPLQSLLISPQMRNSSGAGNTASFTAIDITITIMASAFSLATPTP FT LKGCPLSAPITCLTSVEQRTLANTKPLILMTKRRRRSRILAPSRARLGTQGCACSARGA FT LKALQPATAKKADPAPQKTRRINTYSLMGADQVYPSMSMVTSSQSPTRSCPRKSASSWS FT THRLWAVRLRTLYPANYIGTSADFLTRLRNGPPSRVPIPVNQSCLLVAISKATSISLEE FT LWKTLAALLPDSLLLPEDITTRGLSTDHFVVLASAHSLKCIFISGALELELGLHNAHHS FT FTIKHTSSANQLPHFELVADGTRALRGAASDTKELNRAALGFKFKNAFLPFRKVHVHTT FT EPDRAKNLISNMKNGFDGVLANIDPNHPHEARDRLLALDGSIEVHAPRKVSLIHLAGFP FT GCGKTKPIQALLKTSLFADYKVAVPTVELRAEWKADLALKTGQAWRLSTWESSLLKTAS FT ILVIDEVYKMPRGYVDLAVAADPTVRFVILLGDPLQGEYHSSHPESQNKRLSSEVHRLL FT KYIDCYCLWSHRIPQCVARCFGVESSNEHEGYVGFSSFIAPQDITLACSRSSAKTLRDA FT GYPATTVSSSQGSTYRTPINLLLDRNSRRLSSAVSLVAATRSTMAINMTGDRDVLQQGP FT HNNPVFSALYNANLISLHSLFPTLFAKLPIIRTAITSRRGMLTGGNTSGEDDVIIDSRR FT PGPLNAPEVDDAFLPTWRRPLHRNLASAVHSNCPAQSTHVTPATITAVYPGESFENLAA FT HFLPAHDPEIKEILHRGEFSAQFPILLNQDFSLSAQSSTLIAAKHDSKRDSTLLVASIT FT KRLRFRPSDSSYQLSSKDQILGLTLYHSWCRAYNRHPQAVVPFDELLFAECININEFAQ FT LSNKTKSTIIANASRSDPDWRITAVKIFSKTQHKINEASIFGSWKACQTLALMHDYVVL FT FLGPVKKYQRIFDSQERPANVYHHAGHSPLEMSEWAQKHLRSGISHTNDYTAFDQSQHG FT EAVVFEMAKMRRLSIPESLINLHSYLKRNVDTQFGPLTCMRLTGEPGTYDDNTDYNLAV FT IYSKYLVLDHPIMVSGDDSVIGENPTVSRNWPAIEKLLALRFKTESTKHPLFCGYYVGP FT AGAIRSPITLFAKIMSAVDDLSIDDKLASYLSEFAIGHSLGHDFWDLLPIDQVPYQSAV FT YDFFCRHASREQKQILNIGEVPDTVLSSIASHLRFASRALYCLLPSSVRRALTSKKTVT FT DAFEDPDVSHMQGELLQNFQESNPTKLRGADMSDQVVKQLESNHVDSTPSLIPRPPFQG FT GSRTVPFQTVAMDVVAAGGNATFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQS FT PITLDLVWSTNNVIFTNLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSY FT VDTPKLTLNASDPTGSGSTATTVATVLVSGKLIVSDALATPTPLE" XX SQ Sequence 6117 BP; 1325 A; 2118 C; 1309 G; 1365 T; 0 other; ggaaatacac atctccagtc agctccttta cgcaactgac tttttaatcc atcatctgtt 60 tgtttgcccc cggtatatcc catggcattc caagacgcta tcaacaactt atccagcacc 120 gtccaccgcg acacggttgc cgcacctctc ttagagagca ttgcccaacc tctccgcgac 180 tctcttcaat tatacccctg ggcgatcaac gccgagaaac ttgacctgct gaagaaattt 240 ggcatttctg tctccggcct gggtcatcaa gcccatcctc atccgttcca caagatcatc 300 gaaacgcatc tccttttcca acattggagc cacaactgtc gagaggactc caccgtgctt 360 ttcatgaagc ctgaaaaatt ccaaaaactc gcctctttca atcctcattt caagcatctt 420 ctcaactacc gccttcacgc caaggacacc acccgctatc cagaaactgc gtgcagtctc 480 cccaccactt ccaccgtgtt catgcatgac gccttgatgt actacaaacc ttcgcagatc 540 atggatctct tcctccgcat tccagacctc aacaacctct acgcttccgt ggtggttccc 600 gcggagagct cattcaccga ccaatcctta taccccgagg tttaccagta taagactatc 660 aggagccatc tccactacgt ccctgagtcc aatcactcct cggcctacaa tcaacctgcc 720 gacgccctcc tctggctcga gctttcgacc attcaagggc cctctttctc cctcactgtc 780 accaggctcg actcttgggg cccgtgtcac tcgcttctga tccaacgcgg cataccacca 840 gcccacgttg tcaatgactt cgtcagcttc gacgtgccag ccgccgttct tctccccgag 900 gccaccagca ttcgtcagcc cacccgtcat cgcctagtgc ctcaatccgt gtacaacgct 960 ctgtttactt acacccgagc cgttcggact ctgcgcatct ccgatccagt cggcttcgtt 1020 cgcacacagt ccaacaagcc agagcacgcc tgggtcacgt cctccgcctg ggacaatctc 1080 cagcactttt ctctcctcac tgcctctaac cgtccttcca actcctattc ctggaatggc 1140 agcctctggc agcgcttcat ctctcgcctg caaacagtgg ccgccgagtt gaaatcttca 1200 gccatcttca cttcctccat caccaccttc ctcttctctc tcctcttcca gtacttccgt 1260 cggaaatctg ctacctcgag gtctttgccc agcgacctcg gtttccggaa tctggacgag 1320 cacgtcaagc tccatgaagc cctcctccgg gctggtttta gttatacaca cacttcccaa 1380 acccgccaag ggcctcgagg tttctaccac agggccgctg agcgattcaa attcatgtcc 1440 gcccttgttc gttccatctc cctctctctc cccctgcttg cgttcgccat ctactccaag 1500 tgcacgcagc ccatgccccc tcagagcctt cacgactcct accacaacta ccatcatcca 1560 agcaggtggg tccttggatg gagtcgccgg ctcaccgtgg tcactcccga ggctttcctg 1620 cctttcgaac ctgttccaat ccctgcggtc caatcgccgc caccatggac cccggccccc 1680 ctccagagcc tgttgatctc acctcagatg agaaactcct ctggtgccgg caacacggcg 1740 tcgttcacgg ccatcgacat caccataaca ataatggcct ccgcattttc ccttgccaca 1800 cctacaccgc tgaagggatg tccattatct gcaccgatta cttgcctgac ttcagtggaa 1860 cagagaaccc tggccaacac caagccgctc atcctgatga ccaagaggcg caggcggagc 1920 cgcatccttg ccccctctcg cgcccgcctc ggaacccaag gctgcgcctg ctcagcccgc 1980 ggagccttga aggcccttca gcccgccacc gccaagaagg ccgatcccgc accccaaaaa 2040 acccgacgta ttaacaccta ctctctgatg ggggccgacc aagtgtaccc gtcgatgagc 2100 atggtgacct cctcccaatc gcccacgagg agctgtcctc ggaaatcagc cagctcatgg 2160 tcgacccacc gcttatgggc ggtcagactt cgcacactct accccgcgaa ctatatagga 2220 acctccgctg acttcctcac tcgcctccgc aacggccccc caagccgtgt cccaatccca 2280 gtgaaccaga gttgcctctt agtggcaatc agtaaagcca cctccatctc gctcgaagag 2340 ttgtggaaga ccctcgctgc cctcttgccc gattctctcc tgttgcctga ggacataacg 2400 acccgcggcc tctccacgga ccacttcgta gtcttggcct ccgcccactc tttgaagtgc 2460 attttcatct ccggggcgct cgagctcgag ttaggcctcc acaacgcaca ccactccttc 2520 acaatcaagc acacaagctc ggctaatcaa ctgccacact tcgagctcgt cgcggatggg 2580 acccgggccc ttcgaggcgc cgccagcgat acgaaggaac tgaaccgggc cgccctgggt 2640 ttcaaattca agaacgcctt cctcccgttt cgcaaagtcc atgtccacac cacggaaccc 2700 gaccgcgcca agaatctcat ctcaaacatg aagaatggct tcgatggtgt cctcgccaac 2760 attgacccga accacccgca tgaagctcgt gaccgcctcc ttgcccttga cggcagtatt 2820 gaagtgcacg cccctagaaa ggtaagtctg attcacctag ccgggttccc aggctgcgga 2880 aagaccaagc ccatccaggc cctcctcaag acgagcctat ttgcggatta caaagtggca 2940 gtgcccaccg tggagttacg cgccgagtgg aaagctgatc tggcgctcaa aaccggccag 3000 gcttggagac tctccacttg ggagtcgtcc ttgctcaaga ccgcctccat tcttgtcatt 3060 gatgaggtgt acaaaatgcc ccgcggttac gtggatttgg cagtagcagc tgatcccacc 3120 gtccgttttg tcattctttt gggtgacccc cttcaaggcg agtatcacag ctcccatccg 3180 gaatcccaga ataagcggct ctcctcggag gtccacaggc tgctcaagta catcgactgt 3240 tactgccttt ggtctcaccg aattcctcaa tgcgtcgccc gctgtttcgg ggttgagagc 3300 tcaaacgagc acgaaggtta cgtgggcttt agctccttta tcgcacctca ggacatcacc 3360 ctcgcttgct cgcggagctc agccaagacc ttgcgcgacg ccggataccc tgccaccacc 3420 gtcagtagct ctcaaggttc cacttaccgc accccaatca atcttctcct cgacagaaac 3480 agtcgcagac tgagcagcgc cgtctcgctg gtcgccgcca ctcgttccac catggccata 3540 aacatgacgg gcgatcggga tgttctacaa cagggcccac acaacaaccc ggtgttctct 3600 gcgctttaca acgccaatct gatatccttg cacagcctgt tcccaacgct tttcgcgaag 3660 ttgccgatca tacgcaccgc gatcaccagt cgcaggggca tgctgaccgg tggcaacacc 3720 tctggtgagg acgacgttat cattgattca agacgtccgg gcccgctcaa tgctccagag 3780 gtcgacgatg ctttcctccc gacttggcga cgccctcttc accggaatct tgcctctgct 3840 gttcacagca attgcccagc ccagtccact cacgttactc cggctaccat cactgcggtt 3900 tatcctggtg aatcctttga gaatctcgca gcacatttcc tccccgctca cgaccccgaa 3960 atcaaggaga tcttgcaccg cggcgagttc agcgcgcagt tcccgattct ccttaaccag 4020 gatttctctc tctccgcgca gtcttccacg ttgatcgcgg ctaaacatga ctccaagcgc 4080 gactcgacgc tgctcgtcgc ctccattacc aagcgcctcc gtttccgccc gagcgactct 4140 tcgtaccagc tctcctccaa ggaccaaatt ctgggcttga ccctctacca cagttggtgc 4200 cgagcttaca accgccaccc gcaggcagtc gttccattcg atgagttgct gttcgcggag 4260 tgcatcaaca ttaatgagtt tgcgcagctc tcgaacaaga ccaagagcac gatcattgcg 4320 aacgccagcc gatccgaccc tgattggcgc atcacagccg tcaagatttt tagcaaaacg 4380 cagcacaaaa tcaatgaagc ctccatcttt ggatcctgga aggcttgtca gacgctggcc 4440 ctcatgcatg attatgtggt tcttttcctg ggtccggtca agaaatatca gcgcatcttt 4500 gactcccaag agcgaccagc caacgtgtat caccatgctg gccactcccc tcttgagatg 4560 tccgagtggg cccaaaagca tctccgatca ggaatctctc acaccaacga ctacacagcc 4620 tttgaccaaa gtcaacatgg cgaggctgtc gtcttcgaga tggccaaaat gcgccgcttg 4680 agcatccccg agagcctcat caaccttcat tcgtatctca agcgcaatgt tgacacccag 4740 ttcgggcctc taacgtgcat gaggctcacc ggcgaaccag gcacctatga cgacaacaca 4800 gactacaacc tcgcggtcat ttacagcaag tatctggtcc tcgaccaccc aatcatggtg 4860 tccggagatg atagcgtgat tggcgaaaac ccaacggtgt ctcggaactg gccagccatc 4920 gaaaagctgc tcgctcttcg cttcaaaaca gaaagcacca aacatccact gttctgcgga 4980 tactatgtag gaccagccgg cgccatcagg tctccaatca ccctttttgc aaagatcatg 5040 agtgccgttg acgatctctc gatagacgac aaattggcaa gttacctgtc tgagttcgcg 5100 atcgggcact ccctcgggca cgacttttgg gatcttctgc caattgatca agtcccttat 5160 caatccgcgg tgtatgattt cttctgccgg cacgcctcgc gcgaacagaa gcagatcctc 5220 aacatcggag aagtgcctga cacagttcta tcaagcatag ctagtcatct caggtttgct 5280 agccgagccc tgtattgtct cttgccgtcc tcagttcgcc gggctctcac atccaagaag 5340 actgtcaccg acgcatttga agatcctgat gtctcgcaca tgcagggtga attgcttcag 5400 aacttccaag aatctaaccc aaccaagcta cgaggcgcag acatgtcaga ccaagtcgtc 5460 aaacagctcg aatccaatca cgtcgactcc actccatctc tcatcccgcg cccccccttc 5520 caaggcggca gccgcacagt gcctttccag actgtcgcaa tggacgtcgt cgctgccggc 5580 ggcaatgcaa ctttcaacct agcgggccac gtctcgcttt ctgagatcac tgcaccgtac 5640 cgcaaggcgc gtctggcgga gctcaaagcc atcgtctgcc ccaccgctgc gtccttccaa 5700 tccccgatca ctcttgacct cgtctggagt accaacaatg tcatattcac caacctccag 5760 atacttcagg tctacggggg cacccgcttt gctatcggcg ggcccctcct cagccacacg 5820 tatgagctcc gcgctgacct cagctacctt aatcctgtca tcaaggactc cgtctcatac 5880 gtggacaccc cgaagctcac cctcaacgcc tctgacccaa ctgggtctgg ctcaaccgct 5940 accaccgtcg ccaccgtgct ggtgagcggc aagctgatcg tctccgacgc attggccaca 6000 cccacacccc tcgagtaggt cccttattca gcaatgtttt gggtagtgga gccctctagc 6060 ctccaccttt tcctttcctc tggcattggc gcctaaataa aaaaaaaaaa aaaaaaa 6117 //