ID   AM411652; SV 1; circular; genomic DNA; STD; VRL; 2735 BP.
XX
AC   AM411652;
XX
DT   21-MAR-2007 (Rel. 91, Created)
DT   18-JUN-2007 (Rel. 92, Last updated, Version 3)
XX
DE   Wheat dwarf virus - Barley[Germany:Baden:2005] V1 gene, V2 gene and C1:C2
DE   gene, isolate Baden-Wuerttemberg 2
XX
KW   C1:C2 gene; coat protein; movement protein; Replication-associated protein;
KW   V1 gene; V2 gene.
XX
OS   Wheat dwarf virus - barley[Germany:Baden:2005]
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2735
RA   Jeske H.;
RT   ;
RL   Submitted (21-NOV-2006) to the INSDC.
RL   Jeske H., Molecular Biology and Virology of Plants, University of
RL   Stuttgart, Pfaffenwaldring 57, Stuttgart, 70550, GERMANY.
XX
RN   [2]
RX   DOI; 10.1016/j.virusres.2007.03.018.
RX   PUBMED; 17449126.
RA   Schubert J., Habekuss A., Kazmaier K., Jeske H.;
RT   "Surveying cereal-infecting geminiviruses in Germany--diagnostics and
RT   direct sequencing using rolling circle amplification";
RL   Virus Res. 127(1):61-70(2007).
XX
DR   MD5; 155685b31b931ba2d49eb913ea8d9ead.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2735
FT                   /organism="Wheat dwarf virus - barley[Germany:Baden:2005]"
FT                   /host="Hordeum vulgare"
FT                   /isolate="Baden-Wuerttemberg 2"
FT                   /mol_type="genomic DNA"
FT                   /country="Germany:Baden-Wuerttemberg"
FT                   /collected_by="Katja Kazmaier, Holger Jeske"
FT                   /collection_date="Oct-2005"
FT                   /db_xref="taxon:434026"
FT   rep_origin      join(2708..2735,1..19)
FT                   /direction=RIGHT
FT   CDS             172..444
FT                   /transl_table=1
FT                   /gene="V1"
FT                   /product="movement protein"
FT                   /db_xref="GOA:A4F5E9"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:A4F5E9"
FT                   /protein_id="CAL69915.1"
FT                   /translation="MDQVFTPPRSIRADQYQAPYDPGSSDYAWRTFVFVSFGLLISVGV
FT                   VWLAYTLFLKDCILVWKAKKQRRTEEIGYGNTPARPNGDQQGLPR"
FT   CDS             416..1198
FT                   /transl_table=1
FT                   /gene="V2"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A4F5F3"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:A4F5F3"
FT                   /protein_id="CAL69916.1"
FT                   /translation="MVTNKDSRGKGKRKLEEGESSGRWKGQVYKRRKQTYKVVPVRPPA
FT                   LCVYRYNWLNSDKTNIVVGNTPRIDLITCFAAGKADNNRHTNQTILYKFNLQGTCYVSD
FT                   SSCMFITPIRVYHWLVYDAEPKQATPDSTDIFTMPWNLLPSSWTVQRAWSHRFVVKRKW
FT                   CVNLVSDGRKVGSKTVDSRYNYVVGKNIVDASKFVKGLRVTTEWMNTGDGKIGDIKKGA
FT                   LYLVTCTRGGITGDSASISFEVVCAYTHACYFKSIGIQ"
FT   CDS             complement(join(1370..1783,1870..2499))
FT                   /transl_table=1
FT                   /gene="C1:C2"
FT                   /product="Replication-associated protein"
FT                   /db_xref="GOA:A4F5F4"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:A4F5F4"
FT                   /protein_id="CAL69917.1"
FT                   /translation="MASSSAPRFRVYSKYLFLTYPQCILEPQYALDSLRTLLAKYEPLY
FT                   IAAVRELHEDGSPHLHVLVQNKLRASITNPNALNIGMNTSPFSFFHPNIQAAKDCNQVR
FT                   DYIMKEVDSDVNTAEWGTFVAVTTPGRKDRDADMKQIIESSTSREEFLSMVCHRFPFEW
FT                   SIRLKDFEYTARHLFPDPVSTYTPEFPIESLMCHETIESWKNEHLYSESPGRHKSIYIC
FT                   GPTRTGKTSWARSLGIHNYYNSLVDFTTYDVNAKYNIIDDIPFKFTPNWKCFVGAQRDF
FT                   TVNPKYGKRKMIRGGIPCIILVNPDEDWLKDMTPEQSDYMYSNAVIHYMYEGESFFAFG
FT                   ENVTASQ"
FT   exon            complement(1370..1783)
FT                   /gene="C1:C2"
FT                   /number=2
FT   intron          complement(1784..1869)
FT                   /gene="C1:C2"
FT                   /number=1
FT   exon            complement(1870..2499)
FT                   /gene="C1:C2"
FT                   /number=1
XX
SQ   Sequence 2735 BP; 691 A; 597 C; 746 G; 701 T; 0 other;
     accctgcgtg gtgggtcccg aggcgcactc ggcttttcgt gagtgcgccg aggcttttgg        60
     accacgtctt tatgtcatca catcaattat tgttggtgag tcatcacata ttccacctgc       120
     aattatgtgc catcgcttag cttataagga agtgtcgggg aaggtatctc gatggatcag       180
     gtctttacac cgccgcgttc tatacgggca gatcaatacc aggcccctta cgatcccggg       240
     tcctccgact acgcctggcg gacctttgtg ttcgtctcct tcggtttgtt aatatccgta       300
     ggagttgttt ggttggctta cactctgttc ttgaaggact gcatattagt gtggaaggcg       360
     aagaagcaga ggaggaccga ggaaattggt tacggtaata caccggccag accaaatggt       420
     gaccaacaag gactcccgag gtaagggaaa gaggaagctc gaggagggcg aatcgagtgg       480
     aaggtggaag gggcaagtgt ataagcggcg taagcagacc tacaaggtag tacctgtgag       540
     gccacccgcc ctgtgtgtgt accggtataa ctggctcaat tcagacaaga ccaatatcgt       600
     ggtgggtaac acccctcgga ttgatctgat tacctgcttt gcagcgggca aggccgataa       660
     taatcggcat acaaatcaga ccatcctcta caagtttaac ctacagggga cctgttacgt       720
     gtcggactcc tcatgtatgt tcataacccc aatcagggtt tatcactggt tggtctatga       780
     tgctgagccg aagcaggcta cgcctgactc cactgacatc tttacgatgc cttggaatct       840
     gctgccgagt tcatggactg tgcagagggc ttggtcgcat cggttcgtgg tgaagaggaa       900
     gtggtgcgtg aacctggtct ccgatggaag gaaggttgga tccaagacgg tggactcccg       960
     ctacaactac gtagtgggga agaatatcgt tgacgcctcc aagttcgtga agggtttgcg      1020
     cgtgacgacg gagtggatga acacgggtga cggcaagata ggcgatatta agaagggtgc      1080
     cctgtatcta gtaacctgta ctcgtggagg tatcactgga gacagtgcct ccatttcatt      1140
     cgaagttgta tgtgcctata cgcacgcgtg ttacttcaaa tccattggga ttcaataaat      1200
     aaaatagtat tttattcatc tcatgtcatt cgattacaga tgctcggcta cgagcaaaga      1260
     taaaccaaac tatgacatac aacacactca taaccaaaac atcgaaaaaa gaaatacaag      1320
     gggcgagatc acacaatttt agaaaccgta gccgtccgcg ctaggacagt cactgcgaag      1380
     cagtgacatt ttcgccgaag gcgaagaatg attcaccctc atacatataa tgtatcacag      1440
     cgttagagta catgtaatcc gactgttcag gagtcatatc cttgagccaa tcttcgtctg      1500
     ggttaactaa aatgatgcaa ggtataccac cccgtatcat ttttcgcttc ccgtacttag      1560
     gattgacggt gaagtcacgc tgagccccga cgaagcactt ccagtttggc gtgaacttga      1620
     atggaatgtc gtcaattatg ttgtacttgg cgttgacgtc ataggtcgtg aaatcaacta      1680
     ggctgttgta gtagttgtgg atccctagag atcttgccca ggaagtcttt cctgttcttg      1740
     tcggaccgca gatgtagatg gacttatgcc gtcccggtga ctcctggaat aatcgtccat      1800
     ccactgtaaa tcagttacgg ccttatccgc aggagttgaa gtacaaagga tgtatgattc      1860
     gaggcttacg gagtagagat gttcattttt ccagctttca atggtctcat gacacatgag      1920
     ggactcgatg ggaaactcag gtgtgtaagt gctaactggg tctgggaata ggtggcgtgc      1980
     agtgtattcg aagtctttca gacggataga ccattcaaac ggaaaacgat ggcagaccat      2040
     gctgagaaat tcctctctcg aggtactcga ctcaatgatc tgtttcatat ccgcgtctcg      2100
     gtctttacga cccggagtgg taactgctac gaatgttccc cactcagccg tgttgacatc      2160
     ggagtcaacc tccttcatga tgtaatcacg aacttggttg cagtctttgg cagcttgaat      2220
     gttaggatga aaaaatgaaa atggtgatgt gttcatacca atgttgagag cattgggatt      2280
     ggtgatggaa gcacgaagct tgttttgcac gagtacgtgt agatgtggtg atccatcttc      2340
     gtggagttcc ctaactgcag ctatgtacag aggttcatat ttggccaaga gagtgcgaag      2400
     agagtccaag gcgtactgtg gctctaggat gcattgagga tatgttagga agaggtattt      2460
     ggaatagaca cggaacctgg gtgcagatga agaggccata gtagtcaagc agaagctcgg      2520
     caggtcctta gcgaaaaaac ggggtgtgct cgcgaactct actctctacc ctgcgtggga      2580
     gtgtgcagaa ttcacaccga tgggctcggt gtccacggtt taaatattgc aggtttaggt      2640
     gggaacgcgg gaccctgtct tttcggcgcg aaagcgacgg gtggtcccgc gtgtggtttg      2700
     tggctcgggg acccgccacg caggaatcta atatt                                 2735
//