ID AM398436; SV 1; linear; genomic RNA; STD; VRL; 6381 BP. XX AC AM398436; XX DT 13-SEP-2006 (Rel. 89, Created) DT 16-FEB-2010 (Rel. 103, Last updated, Version 2) XX DE Brugmansia sp. tobamovirus complete virion genome XX KW 125 kDa replicase; 17.6 kDa coat protein; 182 kDa readthrough protein; KW 30 kDa movement protein; complete genome. XX OS Brugmansia mild mottle virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6381 RA Willingmann P.; RT ; RL Submitted (31-AUG-2006) to the INSDC. RL Ilmberger N., Biozentrum Klein-Flottbeck und Botanischer Garten, RL Phytomedizin, Ohnhorststrasse 18, Hamburg 22605, Germany. XX RN [2] RX DOI; 10.1111/j.1439-0434.2007.01235.x. RX AGRICOLA; IND43915816. RA Ilmberger N., Willingmann P., Adam G., Heinze C.; RT "A Subgroup 1 Tobamovirus Isolated from Brugmansia sp. and its Detection by RT RT-PCR"; RL J. Phytopathol. 155(6):326-332(2007). XX DR MD5; 8331dc7bd21273f9f2a02be585944eb7. DR EuropePMC; PMC5282660; 28137291. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6381 FT /organism="Brugmansia mild mottle virus" FT /host="Brugmansia sp." FT /isolate="2373" FT /mol_type="genomic RNA" FT /db_xref="taxon:402399" FT CDS join(61..3405,3409..4902) FT /product="182 kDa readthrough protein" FT /note="readthrough stop codon" FT /db_xref="GOA:Q0E5F1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q0E5F1" FT /protein_id="CAL39883.1" FT /translation="MAHTQTTMQNALLDNVRGNNTLVNDLARRRMYDIAVDEFQAKDRR FT PKINFSKAISEEQTLIATDNYPEFQITFYNTQNAVHSLAGGLRALELEYLMMQVPYGST FT TFDIGGNFAAHLFKGRDYVHCCMPNLDCRDIMRHENQKDSVDMYLQRLKKSGKVIPHFQ FT KPAFDRYCETPADVVCHDTFQSCSYDVSRNGAGRNYAIALHSIYDIPADDFGAALMRKN FT VHTCYAAFHFSEELLLENTHVSLEEIGAMFTREGDSLSFCFVNESTLNYSHSYSNLLRY FT VCKTYFPASSTVVYMKEFLVTRVNTWFCKFTQVDTCFLHRGVHLRGADREAFYAGMEDA FT WHYKKTLALINSERVMLNDAASINFWFPKMKDKVIIPLFDISIDTYKRSRKEVLIDKDF FT VYTVLNHIRTYQAKALTYANVLSFVESIRSRVIINGVTARAEWNVDKALLQSLSMTFFL FT QTKLAMLKDDLMISKFKVGAKTLSEHVWDEVRATLGNVFPSVKEGLIRRKLISVSANAL FT EIKVPDLYTTFQDRFVSEYNSLVEMPTMNIVKQIEDAEQMYNAMSELSVLENSDKFDVT FT IFSEMCKNLEVDPYTAAKVIVAVLQNESGVTLTFSKPTEINVATALAASEVEGEEIVLS FT SKPAEYVSTRSMVAEGKLPMEGLIGDCSSSSMHLNPEIESLSQFHCASVDSLIKKQMAS FT IVYTGPLKVQQMKNYMDSLSASLSASVSNLKKIIRDTVTVDSEPGKFGVWDVSKRSWIV FT KPASKGHAWGVVELHNGKLKLMLLEYSGAEMICEASWRRVAVSTDSMVYSDMKKLQTLR FT GCLKDGEPHVSSAKVTLVDGVPGCGKTKEILQRVDLETDLILVPGKQAAAMIRKRANAK FT GLIVATTENVKTVDSFLMNLGKKPLGRVENLFIDEGLMLHPGCVNFLVSLTMCDRAFVF FT GDTQQIPYINRVQNFPYPKHFATLEVDEVETRRVTMRCPADVTHFLNERYSGTVMCSSG FT VQKSVSSEILVGAGSVNPITKPLKGKILTFTQSDKFALTERGYEDVNTVHEVQGETYED FT VSVVRLTPTPLALISRDSPHVLVCLSRHTKSFKYYTVVLDPLVSLVRDLEKVSHYLLDM FT YKVSAGQQQLQVGFEFIRSNLFVQAPKTGDVQDMQFYYDACLPGNSTILNNFDAVTMRL FT MDNKLNVKDCTIDMSKAVAMPKEKKQPLLPVIRTAAEMPRESGLLENLVAMIKRNFNAP FT DLSGIVDIENTASFVVDKFFDSYFLKEKQKRKDLFTMSRSVLESWLSKQESVTIGQLAD FT FDFIDLPAVDQYRHMIKAQPKQKLDLSIQSEYPALQTIVYHSKKINAIFGPLFSELTRQ FT MLEQIDASRFMFFTRKTPGQIEEFFSDLDSHVPMDILELDVSKYDKSQNEFHCAVEYEI FT WRRMGLDEYLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNTVIIAACLAS FT MLPMDKVIKGAFCGDDSLIYLPKGCELPDIQACANLMWNFEAKLYRKKYGYFCGRYVIH FT HDRGAIVYYDPLKLISKLGAKHIMDEQHLEEFRTSLCDVASSLNNCAYYLQLDDAIREV FT HKTAPGGSFVFKAIVKFLSDKVLFKQLFTSYDS" FT CDS 61..3408 FT /product="125 kDa replicase" FT /db_xref="GOA:Q0E5F4" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q0E5F4" FT /protein_id="CAL39164.1" FT /translation="MAHTQTTMQNALLDNVRGNNTLVNDLARRRMYDIAVDEFQAKDRR FT PKINFSKAISEEQTLIATDNYPEFQITFYNTQNAVHSLAGGLRALELEYLMMQVPYGST FT TFDIGGNFAAHLFKGRDYVHCCMPNLDCRDIMRHENQKDSVDMYLQRLKKSGKVIPHFQ FT KPAFDRYCETPADVVCHDTFQSCSYDVSRNGAGRNYAIALHSIYDIPADDFGAALMRKN FT VHTCYAAFHFSEELLLENTHVSLEEIGAMFTREGDSLSFCFVNESTLNYSHSYSNLLRY FT VCKTYFPASSTVVYMKEFLVTRVNTWFCKFTQVDTCFLHRGVHLRGADREAFYAGMEDA FT WHYKKTLALINSERVMLNDAASINFWFPKMKDKVIIPLFDISIDTYKRSRKEVLIDKDF FT VYTVLNHIRTYQAKALTYANVLSFVESIRSRVIINGVTARAEWNVDKALLQSLSMTFFL FT QTKLAMLKDDLMISKFKVGAKTLSEHVWDEVRATLGNVFPSVKEGLIRRKLISVSANAL FT EIKVPDLYTTFQDRFVSEYNSLVEMPTMNIVKQIEDAEQMYNAMSELSVLENSDKFDVT FT IFSEMCKNLEVDPYTAAKVIVAVLQNESGVTLTFSKPTEINVATALAASEVEGEEIVLS FT SKPAEYVSTRSMVAEGKLPMEGLIGDCSSSSMHLNPEIESLSQFHCASVDSLIKKQMAS FT IVYTGPLKVQQMKNYMDSLSASLSASVSNLKKIIRDTVTVDSEPGKFGVWDVSKRSWIV FT KPASKGHAWGVVELHNGKLKLMLLEYSGAEMICEASWRRVAVSTDSMVYSDMKKLQTLR FT GCLKDGEPHVSSAKVTLVDGVPGCGKTKEILQRVDLETDLILVPGKQAAAMIRKRANAK FT GLIVATTENVKTVDSFLMNLGKKPLGRVENLFIDEGLMLHPGCVNFLVSLTMCDRAFVF FT GDTQQIPYINRVQNFPYPKHFATLEVDEVETRRVTMRCPADVTHFLNERYSGTVMCSSG FT VQKSVSSEILVGAGSVNPITKPLKGKILTFTQSDKFALTERGYEDVNTVHEVQGETYED FT VSVVRLTPTPLALISRDSPHVLVCLSRHTKSFKYYTVVLDPLVSLVRDLEKVSHYLLDM FT YKVSAGQQ" FT CDS 4892..5707 FT /product="30 kDa movement protein" FT /db_xref="GOA:Q0E5F3" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q0E5F3" FT /protein_id="CAL39165.1" FT /translation="MTLSIRDSFKIDEFINLSKVEKAVPALFSRVKTVRVSTVDKIMAT FT KNDSLSDVDLLKGVKLVNNGYVCLVGLVVSGEWNLPDNCKGGVSVCLVDKRMKRANEAT FT LGSYHSRACKKNFSFKLIPNYSITTADAEKQPWQVLVNIRGVQMEQGYCPLSLEFVSVC FT IVHKNNVRKGLRERITNVAEGGSLELTEEVVESFVNDVPMAVRLNHLRNGNKKEGFSKG FT KYVNNNAKERSVNKFVKKSVNGKGGLKVKEISTSVEDYNSSEVSSDSFI" FT CDS 5709..6188 FT /product="17.6 kDa coat protein" FT /db_xref="GOA:Q0E5F2" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q0E5F2" FT /protein_id="CAL39166.1" FT /translation="MAYTITAPNQIVYLGVAYADPILLMNLCTTSQGNQFQTQNARTTV FT QQQFADIWKAVPAVNIRFPENGFLVYRYNAVLDQLVTSLLNSFDTRNRIIEVENPPNPT FT NGEIMSATQRVDDATVNIRASITNLMNELVRGTGFLNRSSFESTSGLTWSTAPTT" XX SQ Sequence 6381 BP; 1833 A; 1159 C; 1606 G; 1783 T; 0 other; gtatttttac aacaattacc atacaacata tacaacacac aacaacaaac aacaatcaca 60 atggcacata cacaaacaac aatgcagaat gctcttcttg acaacgttcg cgggaacaat 120 accctcgtga acgatttggc aagaagacgc atgtacgata ttgcggtcga tgaatttcaa 180 gctaaggacc gcagacccaa gatcaacttt tcaaaagcaa ttagcgaaga acagacgctg 240 attgcaactg ataattatcc tgaattccaa ataacattct acaatacgca gaacgctgtt 300 cactctctgg caggtggatt gcgcgcatta gaattggaat acttgatgat gcaggtgccg 360 tatggttcta caaccttcga catcggggga aatttcgcag ctcatctgtt caagggaaga 420 gattacgttc attgctgtat gcctaatctt gattgtcgcg acataatgcg gcacgaaaat 480 cagaaagaca gcgtggacat gtatctacag aggctcaaga agagtggaaa ggtgattcct 540 cactttcaaa aacctgcttt cgacaggtat tgtgagacgc cggcagacgt agtctgtcac 600 gatacttttc agagctgttc gtatgatgtg agtcggaatg gggcaggaag gaactatgca 660 atagcattgc atagtattta tgatattccg gcggatgact ttggggccgc actcatgcgg 720 aagaacgtgc atacttgtta tgcggcgttc catttctccg aggagctttt acttgagaac 780 acgcacgtat ctcttgagga gatcggcgcg atgtttactc gtgagggtga ctcgttatct 840 ttctgttttg ttaatgaaag cactttaaat tatagtcata gttattctaa tttacttagg 900 tatgtgtgta aaacttattt cccagcttct tcaacagttg tgtatatgaa ggagttttta 960 gttactagag ttaacacctg gttttgcaag ttcacgcaag tggacacatg ttttttgcat 1020 aggggcgttc atttgagagg ggccgacaga gaggcctttt atgcaggaat ggaagatgca 1080 tggcactaca agaagacact tgctctgatc aacagcgaga gggtgatgct caatgatgca 1140 gcatcaatta acttttggtt tccaaagatg aaggacaagg ttataatacc gctttttgac 1200 atctctattg atacatacaa gagaagtcgc aaggaggtgt taattgacaa ggattttgtc 1260 tacactgttt tgaaccacat tcgaacttat caggctaagg cacttacata tgccaatgtg 1320 ttatctttcg tcgaatctat tcgttcgaga gttataatca acggcgtgac tgcaagagcc 1380 gagtggaatg tggacaaggc attgttgcaa agtctttcca tgactttctt cttacaaaca 1440 aaactcgcta tgctcaagga tgatttgatg atcagcaagt tcaaggttgg ggcaaagacg 1500 ttgtctgaac acgtctggga tgaagtgaga gctacattgg ggaatgtttt tccctctgtg 1560 aaggaggggc tgatacggag gaagttgatc tccgtgagcg cgaacgcgct cgaaattaag 1620 gttcccgatt tgtacacaac ctttcaagat aggtttgttt cggagtataa ttcgctggta 1680 gaaatgccga cgatgaatat tgtgaagcag atcgaggatg ctgagcaaat gtacaatgct 1740 atgtctgagc tgtctgtgct tgagaacagt gacaagtttg atgttaccat cttctcggag 1800 atgtgtaaga atctggaggt tgatccctat acagctgcca aggtgattgt ggcggttttg 1860 cagaatgaaa gcggagtaac gctaaccttt tccaaaccca ctgagattaa tgtggcgacc 1920 gccttggcgg cgtctgaagt tgagggtgaa gagattgtgt tatcttcgaa gcctgctgag 1980 tacgtttcta caaggtcaat ggtagcggaa ggtaagctac cgatggaagg gctgatcggc 2040 gattgctcgt cgtcatctat gcacctgaat cctgagattg agtctttgtc gcaatttcac 2100 tgtgcttctg ttgattcgct gattaaaaag caaatggcat cgatcgtcta tactggtcct 2160 ttgaaagttc aacaaatgaa gaactatatg gacagtttga gtgcgtcttt gtctgcgtct 2220 gtctcgaatc tgaagaaaat aatcagagat accgtgactg ttgactccga gcctggaaag 2280 ttcggtgttt gggatgttag caaaaggagc tggatcgtga agcctgccag caagggccat 2340 gcatggggag tcgtagaact ccacaatggc aagttgaagc ttatgcttct tgagtactct 2400 ggggcagaga tgatttgtga ggcaagctgg agaagggtag ccgtgtctac ggactcaatg 2460 gtttactctg acatgaagaa actgcaaact ttgaggggtt gtctgaagga cggagaaccg 2520 cacgtcagta gtgcgaaggt cacattggtt gatggggtac ctggctgcgg caagacaaag 2580 gaaattttgc agcgagtgga tctggaaaca gatctcattc tggtacctgg caagcaagca 2640 gcagcaatga taaggaagag ggcaaatgca aagggtctaa tcgtcgcaac tactgaaaat 2700 gtgaagacgg tggactcatt cttaatgaat cttgggaaga aaccattggg cagggtcgaa 2760 aacctgttca ttgatgaagg acttatgttg caccctgggt gcgtgaactt tctggtgagt 2820 ttgactatgt gcgacagagc tttcgtcttt ggagacacac agcaaattcc gtacatcaac 2880 agagtccaaa acttcccata tccaaagcat tttgcaactc tagaagttga tgaggtggag 2940 acaaggaggg taactatgag atgtccagct gatgtaacac actttttgaa tgagagatac 3000 agcgggacag tgatgtgctc atctggagta cagaagtcag tctcctctga gattctagtc 3060 ggagcgggat cggtcaatcc gattaccaaa ccgctgaagg gaaagatttt gaccttcact 3120 cagagtgata agtttgccct gactgagaga ggatatgaag atgtgaatac agtgcatgaa 3180 gtgcaaggag aaacatatga ggacgtttcg gtggttagat taacaccaac tcctctggct 3240 ctgatttcaa gggatagccc ccatgttctg gtgtgtttgt ctaggcatac taagtctttc 3300 aagtattata ctgttgtttt ggaccctttg gtcagtttgg tgagagatct tgaaaaagta 3360 tctcactatt tgttagatat gtacaaagtg tcagcaggtc agcaatagca attacaggtc 3420 gggttcgaat ttattcgttc caatctgttt gtgcaggcgc caaaaactgg cgatgttcag 3480 gatatgcaat tctactatga tgcctgtctt cctggtaaca gcacgatttt gaataatttc 3540 gatgctgtaa cgatgaggtt gatggacaac aagttgaatg tcaaggactg cacaatagat 3600 atgtccaagg ctgtggcgat gcccaaggaa aagaagcaac cattgctgcc ggtcatcagg 3660 acggccgccg agatgcctcg cgaaagcggg cttcttgaaa atttggttgc gatgataaaa 3720 agaaatttca atgcaccgga tctttctgga attgttgata ttgaaaacac tgcttctttt 3780 gtggtagata agttttttga tagttatttt ttaaaagaaa aacaaaaaag aaaggatctg 3840 ttcaccatga gcagaagtgt tttggagagc tggctgagta aacaagagag tgtcacaatt 3900 gggcaactgg ctgattttga tttcatagat cttccggctg ttgaccaata caggcatatg 3960 attaaggctc agcctaagca aaaattggat ttgtcgattc aaagtgagta ccccgcattg 4020 cagacaattg tgtaccactc aaaaaagata aatgccattt ttggacctct gttctcggaa 4080 ctgacgagac agatgttgga gcagatagat gcatccagat tcatgttctt tacaaggaag 4140 actccgggac agattgaaga gttcttttca gatctcgact ctcatgtacc gatggatatt 4200 ctggaattgg atgtttccaa atatgacaaa tcccaaaatg aattccactg tgcagtggaa 4260 tatgagatct ggagaagaat gggtttggat gaatatttgg ctgaggtgtg gaaacaaggt 4320 cacaggaaga ccacattgaa agactacacc gcagggatca agacttgtct ttggtaccag 4380 cggaagagtg gtgatgtgac aacattcatt ggaaacaccg tcataatagc ggcgtgtctg 4440 gcttctatgc ttccgatgga taaggtgata aaaggtgctt tctgcgggga cgatagtttg 4500 atatatctcc ctaaaggctg cgagctgcct gatattcagg cttgtgcaaa tctgatgtgg 4560 aattttgaag caaagctgta caggaagaag tatggttact tctgcggtag gtacgtaata 4620 catcacgatc gtggtgcaat cgtatactat gatccgctta aactgatctc taaactgggg 4680 gctaagcata taatggatga gcagcatttg gaagagttca gaacgtcgtt gtgtgacgtg 4740 gcaagttctt taaataattg tgcatattat ttgcaacttg acgatgccat cagggaagtc 4800 cacaagactg ctccgggtgg atcatttgtt tttaaagcaa ttgttaaatt tttgagtgat 4860 aaagtattgt tcaaacagtt atttaccagc tatgactctt agcatcagag attcgttcaa 4920 aattgatgag ttcattaact tgtccaaggt ggaaaaagct gtgccggccc ttttttcgag 4980 ggttaaaacg gtacgcgtct ctacagtgga taagattatg gcaaccaaga acgacagttt 5040 gtccgatgtg gacttactga aaggtgttaa gttggttaac aatggttatg tctgtttagt 5100 agggcttgtt gtgtctggtg agtggaattt accggacaac tgtaagggtg gtgttagtgt 5160 atgtcttgtt gataaaagaa tgaaaagggc taacgaggcg actttagggt cgtatcactc 5220 gagggcctgc aaaaagaatt tttctttcaa gttaattcct aattatagta taacgaccgc 5280 ggatgctgaa aagcaaccgt ggcaagtttt agtcaatatt aggggtgtcc agatggagca 5340 gggatactgt cctctgtctc ttgagtttgt gtcagtttgc atagttcata aaaataatgt 5400 cagaaaagga ttgcgtgaaa ggatcacgaa tgttgccgaa ggcggttcac ttgagctcac 5460 tgaagaagtt gttgagagct ttgtgaatga cgtccctatg gcagtacgac tgaaccattt 5520 acgtaatgga aacaaaaaag aagggttttc caaaggtaaa tatgtcaata ataacgccaa 5580 agagcgtagt gtcaataaat ttgttaaaaa gagtgttaat ggtaaaggtg gtttaaaagt 5640 taaagaaatt tcaacgagcg ttgaggatta caactctagc gaggtgtctt ccgattcgtt 5700 tatttgaaat ggcttatact attactgcac caaaccaaat cgtgtatttg ggcgtagctt 5760 atgctgaccc aattttgcta atgaatttgt gtactacttc tcaggggaat cagtttcaga 5820 cgcagaatgc taggacaacc gtccaacagc aatttgcaga tatctggaag gccgttccgg 5880 ccgttaatat aaggtttccc gagaatgggt ttttagtata taggtataat gcggtgttgg 5940 accagttggt cacttcactg cttaattcgt ttgatacccg caataggata atagaggtgg 6000 aaaatcctcc taatcctaca aacggggaaa taatgagtgc gactcagaga gtcgatgacg 6060 ctaccgtaaa tattcgggcg tctataacta acttgatgaa cgagttagtg cgtggtaccg 6120 ggtttttaaa caggagctct ttcgagagca ccagtggatt aacctggtct acagccccta 6180 ctacttaagt agggaaaatt tagtgtctta gctcacagct aagggtggcg cttaccataa 6240 agcgtagtgt ttactctcca cttaaatcga agagttgtac atccggatct ataaagggaa 6300 aaacgtgtga cgtttggaac tttaggtgta cgtaaaaact agagaggttc gaatcctccc 6360 tgtacccccg gtaggggccc a 6381 //