ID AM292302; SV 1; linear; genomic DNA; STD; VRL; 2739 BP. XX AC AM292302; XX DT 19-JUL-2006 (Rel. 88, Created) DT 19-JUL-2006 (Rel. 88, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus-[Multan;Luffa] V2 gene, AV3 gene, CP gene, DE AC1 gene, REn gene, TrAP gene, AC4 gene and AC5 gene XX KW AC1 gene; AC4 gene; AC4 protein; AC5 gene; AC5 protein; AV3 gene; KW AV3 protein; coat protein; CP gene; pre-coat protein; REn gene; KW replication association protein; replication enhancer protein; KW transcriptional activator protein; TrAP gene; V2 gene. XX OS Tomato leaf curl New Delhi virus-[Multan:Luffa] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Tahir M.; RT ; RL Submitted (16-JUL-2006) to the INSDC. RL Tahir M., School of Biological Sciences, University of the Punjab, School RL of Biological sciences, University of the Punjab, Lahore, PAKISTAN. XX RN [2] RA Tahir M., Haider M.S., Briddon R.W.; RT "Diversity of begomoviruses in Pakistan"; RL Unpublished. XX DR MD5; 2f89abcfb7436a050a6b84cb80b52bee. DR EuropePMC; PMC6460037; 30975814. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Tomato leaf curl New Delhi virus-[Multan:Luffa]" FT /host="Luffa cylindrica" FT /mol_type="genomic DNA" FT /country="Pakistan:Multan" FT /isolation_source="leaf" FT /collected_by="Muhammad Tahir" FT /collection_date="02-Jul-2005" FT /clone="KTAM1(2)" FT /db_xref="taxon:394337" FT CDS 41..427 FT /transl_table=1 FT /gene="AV3" FT /product="AV3 protein" FT /db_xref="UniProtKB/TrEMBL:Q0VKH8" FT /protein_id="CAL22867.1" FT /translation="MKFTLHGLFSAWGPINRLAHQVWIHKHVGSITARISRKRSWSKVH FT ASCKISPRDRKELFPRHSRLRSCPRSHSCSSGKELWRSDQQISSFQRPHRKYADVSTST FT APMELVQLSPLPASQRQRPGPTGR" FT CDS 120..458 FT /transl_table=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q0VKH7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q0VKH7" FT /protein_id="CAL22868.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIESTPTSQLRQPLWSSCSCPHCPRHKGKGLDQQADEQ FT KTQNVQNV" FT CDS 280..1050 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q0VKH6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q0VKH6" FT /protein_id="CAL22869.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVYHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVRKFVRVNNYVVYNQQEAGKYENH FT IENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(310..795) FT /transl_table=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:Q0VKH5" FT /protein_id="CAL22870.1" FT /translation="MHVLHRCCARFIVKHIKHFPEILGGSCRTTVTNQKKHDTVSMVFC FT LDVFIHPYLSQHIDGFHTETLPYAMCESSASGNITNTHDFANMIDIVPRFKGLHLTRAF FT TAPWHVGTSIHSVHSGFSVHRPVGPGLCLCDAGNGDNCTSSIGAVEVETSAYFRCGR" FT CDS complement(1047..1457) FT /transl_table=1 FT /gene="REn" FT /product="replication enhancer protein" FT /db_xref="GOA:Q0VKH4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q0VKH4" FT /protein_id="CAL22871.1" FT /translation="MITDSRTGEYITADRTESGVFIWEVPNPLYFKILKHDSRPFLTQH FT DIIKIQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGI FT YNVIRAVYHVLDNVLERTIDVWTSYDIKLDIY" FT CDS complement(1177..1596) FT /transl_table=1 FT /gene="TrAP" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q0VKH3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q0VKH3" FT /protein_id="CAL22872.1" FT /translation="MQSSSHSKNHSIPVAKTSLPQKKKKGIRRRRVDLPCGCSYYISIN FT CHDHGFTHRGIHHCGSYREWRVYLGGSKSPVFQNFETRQQALPNTARHNQDSNTVQPQP FT AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNPGP" FT CDS complement(1499..2584) FT /transl_table=1 FT /gene="AC1" FT /product="replication association protein" FT /db_xref="GOA:Q0VKH2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q0VKH2" FT /protein_id="CAL22873.1" FT /translation="MAPPRRFRIDAKNYFLTYPKCSLTKEEALSQLQTLETPTAKKFIK FT ICRELHEDGSPHLHILIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKKYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAQAINTGNKEDALKVLKELAPKDYVLQFH FT NLVTNLDRIFQPRSEVYVSPFSISSFDRVPPELVDWASSNVVCAAARPFRPISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT HRNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPPEEEEGHSQEAS" FT CDS complement(2251..2427) FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q0VKH1" FT /protein_id="CAL22874.1" FT /translation="MGLRISIFSSNSKENSNAKITDSSTWFPQVGQHISIRTFRELNQR FT QMSRNTSTKTETF" XX SQ Sequence 2739 BP; 747 A; 599 C; 611 G; 782 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg ccctcaacca atgaaattca cgctacatgg 60 cttatttagt gcgtggggac caataaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attactgcac gaatttccag aaagcgttca tggtctaagg tgcatgctag 180 ctgtaaaata tctccaagag atagaaaaga actattcccc agacacagtc ggctacgatc 240 ttgtccgaga tctcattctt gttcttcggg caaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaagta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaagg caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaaggggc 480 tgtgaaggcc cttgtaaggt gcagtccttt gaatctaggc acgatgtcta tcatattggc 540 aaagtcatgt gtgttagtga tgttacccga ggcactggac tcacacatcg cgtagggaag 600 cgtttctgtg tgaaatccgt ctatgtgctg ggaaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttt tttctggttc gtgaccgtcg tcctacagga 720 tccccccaag atttcgggga agtgtttaat atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga agtggcatgc gactgtgacg 840 ggaggaacat atgcatctaa ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgttgttt ataaccaaca agaggccggc aagtatgaga atcatattga aaacgcatta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctactttt atgattcggt cacaaattaa taaatatcca gttttatatc atacgaagtc 1080 catacatcaa ttgttcgctc caatacatta tccaatacat gataaactgc tcttattaca 1140 ttataaattc ctatgacacc taacatatcc aggtacttaa ggacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaact gtatttgaat cttgattatg 1320 tcgtgctgtg ttaggaaggg cctgctgtcg tgtttcaaaa ttttgaaata caggggattt 1380 ggaacctccc agataaacac gccactctct gtacgatccg cagtgatgta ttcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatataatag gaacaaccac acggcagatc 1500 aactcgcctc ctgcgaatgc ccttcttctt cttctggggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcttcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcattttt ttcttcgtcc agatattcct tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgactggctt tccgtacttc gtgttgcgat 1740 gccagtccct ttgggccccc atgaactctt taaagtgctt tagatagtgg ggatcaacgt 1800 catcaatgac gttgtaccag gcatcattgc tatacacctt tgggctcaga tcaagatgtc 1860 cacacaagta attgtggggt cccaagcacc gagcccacat tgttttgccc gttctactat 1920 ccccctctat gactatgctt atgggcctaa aaggccgcgc agcggcacac accacattgg 1980 acgaagccca atcgacgagt tctggcggaa ccctgtcgaa ggaagaaatt gaaaatggag 2040 aaacataaac ctcagaacga ggttgaaaaa tgcgatctaa atttgtaact aaattgtgaa 2100 actgcaaaac ataatctttt ggcgctaatt ctttcaatac tttcaacgca tcctctttat 2160 ttcctgtatt aattgcttgg gcatatgcat cgttggccgt ctgttgacct ccacgagcag 2220 atcgtccatc gatctggaaa acaccccatt ctagaacgtc tccgtctttg tcgatgtatt 2280 tcttgacatc tgacgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggaaac caagtcgaag aatctgttat ttttgcattg gaattttcct tcgaattgga 2400 tgagaatatg gagatgcgga gacccatctt cgtgaagctc tctacagatc ttgatgaatt 2460 tcttcgcagt tggggtttct agggtttgca attgggaaag tgcctcttct ttagttagag 2520 agcacttcgg atatgtgagg aaatagtttt tggcatctat tctaaaacga cgtggcggag 2580 ccattaaact tgtcgttttg attcggcgtc cctcaacttc ctctatgtaa ttggcgtctg 2640 gcgtcccata tataggtagg acgctaaatg gcagaattgt aattttgaaa agaaaattac 2700 tttaattcaa aatcctcata gcggccattc gttaatatt 2739 //