ID AM286794; SV 1; circular; genomic DNA; STD; VRL; 2756 BP. XX AC AM286794; XX DT 10-JAN-2009 (Rel. 98, Created) DT 10-JAN-2009 (Rel. 98, Last updated, Version 1) XX DE Squash leaf curl China virus - [Cucurbita pepo: Lahore] AV2 gene, CP gene, DE AC1 gene, TrAP gene, ReN gene, AC4 gene and AC5 gene, clone CPoAL4(3) XX KW AC1 gene; AC4 gene; AC4 protein; AC5 gene; AC5 protein; AV2 gene; KW coat protein; CP gene; pre-coat protein; ReN gene; replication enhancer; KW replication initiation protein; transcriptional activator; TrAP gene. XX OS Squash leaf curl China virus - [Cucurbita pepo: Lahore] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2756 RA Tahir M.; RT ; RL Submitted (11-JUL-2006) to the INSDC. RL Tahir M., School of Biological Sciences, University of the Punjab, School RL of Biological Sciences, University of the Punjab, New Campus, Lahore, RL PAKISTAN. XX RN [2] RA Tahir M., Haider M.S., Briddon R.W.; RT "Diversity of begomoviruses in Pakistan"; RL Unpublished. XX DR MD5; 804c2feb089d947ce4e5e73de097bc2c. XX FH Key Location/Qualifiers FH FT source 1..2756 FT /organism="Squash leaf curl China virus - [Cucurbita pepo: FT Lahore]" FT /host="Cucurbita pepo" FT /mol_type="genomic DNA" FT /country="Pakistan:Lahore" FT /isolation_source="leaf" FT /collected_by="Muhammad Tahir" FT /collection_date="20-Jun-2005" FT /clone="CPoAL4(3)" FT /db_xref="taxon:393625" FT CDS 121..459 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B7ZEA2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B7ZEA2" FT /protein_id="CAL18278.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLLEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIEGTPTSELRQPLWSSCRCPHCPRHKSKGMDQQADEQ FT KTQNVQNV" FT CDS 281..1051 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B7ZEA3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B7ZEA3" FT /protein_id="CAL18279.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDVNIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVGYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(311..796) FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B7ZEA4" FT /protein_id="CAL18280.1" FT /translation="MHILHCCCARFIVKHVKNFPKILGRSCRTTITNQKKHDTVSMVFS FT LDVYIHPYLPQHIDGFHTKSLPYAMCESGSSCNITNTHDLANMRDIVPRFKGLHLTRAF FT TAPWHVGTSIHSVHSGFSVHRPVGPCLCFCDAGNGDNGTSSIGAVEVQTSAYLRCGR" FT CDS complement(1048..1458) FT /gene="ReN" FT /product="replication enhancer" FT /db_xref="GOA:B7ZEA5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B7ZEA5" FT /protein_id="CAL18281.1" FT /translation="MITDSRTGEYITADRAENGVYIWEVPNPLYFKIIKHDIRPCLVEH FT DIIKVHIMFNHNLRKALGLHKCVLMFQIWTGLRPPTGIFLRVFKTQVLKYLDMLGVIGI FT NNVLKAVYHVLDNVLEKTIDVWTTYDVKLNIY" FT CDS complement(1193..1597) FT /gene="TrAP" FT /product="transcriptional activator" FT /db_xref="GOA:B7ZEA6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B7ZEA6" FT /protein_id="CAL18282.1" FT /translation="MQSSSQSKNHSIPVAKESLHPKKKKNIRRRRIDLPCGCSYYMSID FT CHDHGFTHRGVHHCGSSREWRVYLGSSKSPIFQNNKTRYQTVSSRTRHNQSAYNVQPQP FT AESTGTSQMCSNVPNLDGLTPSDWDFLESL" FT CDS complement(1500..2603) FT /gene="AC1" FT /product="replication initiation protein" FT /function="replication intiation" FT /db_xref="GOA:B7ZEA7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B7ZEA7" FT /protein_id="CAL18283.1" FT /translation="MAPPRHFKVNAKNYFLTYPKCSLTKEEALSQLKTLETPTSKKYIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSKSRSAHFHPNIQGAKSASDVKQYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAKAINTGNKEDALKVLKELAPKDYVLQFH FT NMNSNLDRIFPPQAEVYISPFSVSSFDRVPQELVDWVSSNLRCSAARPFSAALPIRPIG FT LVLEGDSRTGKTAWARSLGPHNYLCGHIDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFM FT GAQRDWQRNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWALKNAIFI FT TIEEPLYSGRERIASSEEEEEHQAQTN" FT CDS complement(2270..2446) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B7ZEA8" FT /protein_id="CAL18284.1" FT /translation="MGLRISTFLSSSKASFSAKITDSSTWCPKVGQHISIRTFRELNRH FT RTSNNTSTKTVTY" XX SQ Sequence 2756 BP; 746 A; 586 C; 606 G; 818 T; 0 other; accgaatggc cgcccgattt ttttaggtgg gtcctcaacc aatgaaatgc acgctacatg 60 gcttatttag tgtgtgggga ccaataaata gacttgctca cgaagtttgt atccacaaac 120 atgtgggatc cattactgca cgaatttcct gaaagcgttc atggtctacg gtgcatgcta 180 gctgtaaaat atcttctaga gatagaaaag aattattcac cagacacagt cggctacgat 240 cttgtgcgag atctcatcct tgttcttcga gcaaagaact atggcgaagc gaccagcaga 300 tatcatcatt tcaacgcccg catcgaaggt acgccgacgt ctgaacttcg acagccccta 360 tggagctcgt gccgttgtcc ccattgcccg cgtcacaaaa gcaaaggcat ggaccaacag 420 gccgatgaac agaaaaccca gaatgtacag aatgtataga agtcccgacg tgccaagggg 480 ctgtgaaggc ccttgtaagg tgcagtcctt tgaatctagg cacgatgtct ctcatattgg 540 caaggtcatg tgtgttagtg atgttacacg aggaaccgga ctcacacatc gcgtagggaa 600 gcgattttgt gtgaaatccg tctatgtgct ggggaagata tggatggatg taaacatcaa 660 gactaaaaac catactaaca gtgtcatgtt ttttttggtt cgtgatcgtc gtcctacagg 720 atctccccaa gattttgggg aagtttttaa catgtttgac aatgaaccga gcacagcaac 780 agtgaagaat atgcatcgtg atcgttatca agtcttacgg aagtggcatg cgactgtgac 840 gggaggaaca tatgcttcta gagagcaggc attagttagg aaatttgtta gggtcaataa 900 ttatgttggt tacaatcaac aagaggccgg caagtatgag aatcatactg aaaatgcatt 960 aatgttgtat atggcctgta ctcacgcatc aaatcctgta tacgcgacat tgaaaatccg 1020 gatctatttt tatgattcgg taacaaatta atatatattc aatttcacat catatgttgt 1080 ccatacatca attgtttttt ccaagacatt atccaaaaca tgataaactg cttttaatac 1140 attattaata ccaatcaccc ccaacatatc caggtactta aggacctggg tcttaaagac 1200 tctcaagaaa atcccagtcg gagggcgtaa gcccgtccag atttggaaca ttagaacaca 1260 tttgtgaagt cccagtgctt tccgcaggtt gtggttgaac attatatgca ctttgattat 1320 gtcgtgttct actagacacg gtctgatatc gtgttttatt attttgaaat ataggggatt 1380 tggaacttcc cagatataca cgccattctc tgctcgatcc gcagtgatgt actcccctgt 1440 gcgtgaatcc gtgatcatgg caatctattg acatgtaata cgagcatccg cacggtagat 1500 caattcgtct gcgcctgatg ttcttcttct tcttcggatg aagcgattct ttcgcgaccg 1560 gaatagagtg gttcttcgat tgtgatgaag attgcattct ttaatgccca ctgtttcagt 1620 gctgcattct tctcttcatc gagatattct ttgtaactgc tgttcggtcc tttattgcag 1680 aggaagatgg tgggaattcc acctttaatc atgactggct ttccgtactt cgtgttgcgt 1740 tgccagtccc tttgggcccc catgaactct ttaaagtgct ttagatagtg gggatcaacg 1800 tcatcaatga cgttgtacca agcatcatta ttgtacactc tcgggcttag atctatgtgg 1860 ccgcacagat aattgtgcgg tcccaaagaa cgcgcccacg ctgttttgcc cgttctacta 1920 tcaccctcta aaactaaccc tatgggtcta attgggagcg cagcggaaaa aggccgcgca 1980 gcggaacacc tcaaatttga cgacacccaa tcgacgagtt cttgcggcac tctgtcgaag 2040 gatgaaactg aaaaaggaga aatatacacc tcagcttgag gtggaaaaat tcgatctaaa 2100 ttggaattca tattatggaa ttgcagaaca taatctttcg gtgctaattc tttcaatact 2160 ttcaacgcat cttccttatt tcctgtattg attgcctttg cgtacgcgtc gtttgctgtt 2220 tgttgtcctc cacgagcaga tcggccatcg atctggaaaa caccccattc taatacgtca 2280 ccgtctttgt cgatgtattg tttgacgtcc gatgccgatt tagctccctg aatgttcgga 2340 tggaaatgtg ctgaccgact tttggacacc aagtcgaaga atctgttatt tttgcactga 2400 aacttgcctt cgaactggat aagaacgtgg atatgcggag acccatcttc gtgtagctct 2460 ctgcaaattt tgatatattt cttcgaagtt ggagtctcta gggttttcaa ttgggaaagt 2520 gcctcttctt tggttagaga acactttgga tacgtgagga aatagttttt cgcatttact 2580 ttgaaatgcc taggaggagc catcaaaacg cgcgttttga ttcggggtct ctccaaaact 2640 atgttatatt ggtgtatgga gtctcatata tactttggac accaaatggc aaaatggtaa 2700 ttatggaaat aattacttta attcaaaatg actaaagcgg ccattcgtat aatatt 2756 //