ID AM286433; SV 1; circular; genomic DNA; STD; VRL; 2738 BP. XX AC AM286433; XX DT 10-JUL-2007 (Rel. 92, Created) DT 10-JUL-2007 (Rel. 92, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus-[Pumpkin:New Delhi] segment DNA-A, DE complete sequence, isolate 1 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; AC4 protein; KW AV2 protein; coat protein; replication enhancer protein; KW replication-associated protein; transcriptional activator protein. XX OS Tomato leaf curl New Delhi virus [Pumpkin:New Delhi] OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; OC Tomato leaf curl New Delhi virus. XX RN [1] RP 1-2738 RA Maruthi M.N.; RT ; RL Submitted (10-JUL-2006) to the INSDC. RL Maruthi M.N., Natural Resources Institute, University of Greenwich, Central RL Avenue, Chatham Maritime, Kent, ME4 4TB, UNITED KINGDOM. XX RN [2] RA Maruthi M.N., Rekha A.R., Muniyappa V.; RT "Pumpkin yellow vein mosaic disease is caused by two distinct RT begomoviruses; complete viral sequences and comparative transmission by an RT indigenous and the introduced B-biotype Bemisia tabaci"; RL Unpublished. XX DR MD5; ac2d61e0ce06f147c5a06bf23eb2bd11. DR EuropePMC; PMC3650187; 24426262. XX FH Key Location/Qualifiers FH FT source 1..2738 FT /organism="Tomato leaf curl New Delhi virus [Pumpkin:New FT Delhi]" FT /segment="DNA-A" FT /host="pumpkin" FT /isolate="1" FT /mol_type="genomic DNA" FT /country="India:New Delhi" FT /db_xref="taxon:393597" FT CDS 120..458 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A6PYD9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A6PYD9" FT /protein_id="CAL15157.1" FT /translation="MWDPLLHEFPESVHGVRGMLAVKYLQEIEKNYSSNTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFTARIEGTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQADEQ FT KTQNVQNV" FT CDS 280..1050 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A6PYE0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A6PYE0" FT /protein_id="CAL15158.1" FT /translation="MAKRPADIIISPPASKVPRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHANSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1047..1457) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:A6PYE1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A6PYE1" FT /protein_id="CAL15159.1" FT /translation="MITDSRTGEYITADRTESGVYTWEIRNPLYFKILKHDSRPFLTQH FT DIIKIQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGI FT YNVIRAVYHVLDNVLERTIDVQTSYDIKLDIY" FT CDS complement(1177..1596) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:A6PYE2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A6PYE2" FT /protein_id="CAL15160.1" FT /translation="MQSSSHSKNHSIPVAKTSLPQKKKKSIRRRRVDLPCGCSYYISIN FT CHDHGFTHRGVHHCGSYREWRIYLGNSKSPVFQNFETRQQALPNTARHHQDSNTVQPQP FT AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNPGP" FT CDS complement(1499..2584) FT /gene="AC1" FT /product="replication-associated protein" FT /function="virus replication" FT /db_xref="GOA:A6PYE3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A6PYE3" FT /protein_id="CAL15161.1" FT /translation="MASPRRFRVNAKNYFLTYPKCSLTKEEALSQLQTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKYQCKNNRFFDLVSPSRSTHFHPNIQGAKSASDVKAYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAKAINTGNKDDALNVLKELAPKDYVLQFH FT NLNTNLDRIFQPPSEVYVSPFSISSFDRVPADLVDWVSSNVVCAAARPFRPISIVIEGD FT SRTGKTMWARRLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNPKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPAEEEEEHSQEAS" FT CDS complement(2251..2427) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A6PYE4" FT /protein_id="CAL15162.1" FT /translation="MGLRISMFSSNSKGNTSARITDSSTWFPLVGQHISIRTFRELNQH FT RTSKHTSTRTETS" XX SQ Sequence 2738 BP; 747 A; 592 C; 621 G; 778 T; 0 other; accgaatggc cgcgcaaatt tttaagtggg cccccaccca atgaaattca agatacatgg 60 cttatttagt gcgtgggggc caataaatag acttgctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtgtaagg ggcatgctag 180 ctgtaaaata tctccaagag atagagaaga actattcctc caacacagtc ggctacgatc 240 ttgtccgaga tctcattctt gttctccgag caaagaacta tggcgaagcg accagcagat 300 atcatcattt caccgcccgc atcgaaggta ccccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaaggggc 480 tgtgaaggcc cttgtaaggt gcaatctttt gaatctaggc acgatgtctc tcatattggc 540 aaagtcatgt gtgttagtga tgttacccga ggaactggac tcacacatcg cgtagggaag 600 cgattctgtg tgaaatctgt ctatgtgctg ggaaagatat ggatggatga aaacatcaag 660 acaaaaaacc atgctaacag tgtcatgttt tttttagttc gtgaccgtcg tcctacagga 720 tccccccaag attttgggga agtttttaac atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga agtggcatgc gactgtgacg 840 ggaggaacat atgcatctag ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgtagttt ataatcaaca agaggcgggc aagtatgaga atcatactga aaatgcatta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctattttt atgattcggt aacaaattaa taaatatcaa gctttatatc atatgaagtc 1080 tgtacatcaa ttgttcgctc caatacatta tccaaaacat gataaactgc tcttattaca 1140 ttataaattc ctattacacc gagcatatcc aggtacttaa ggacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaact gtatttgaat cttgatgatg 1320 tcgtgctgtg ttaggaaggg cctgctgtcg tgtttcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gtacgatccg cagtgatgta ctcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatgtaatac gaacacccac acggcagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctgcggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcttcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcattttt ttcttcgtcc agatattcct tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgactggctt tccgtacttg gggttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt tagatagtgg ggatcaacgt 1800 catcaatgac gttgtaccag gcatcattgc tatacacctt tgggctcaga tcaagatgtc 1860 cacacaagta attgtgtggt cccaagcgac gagcccacat tgttttgccc gttctactat 1920 ccccctctat gactatgctt atgggcctaa aaggccgcgc agcggcacac accacattgg 1980 acgagaccca atcgacgagg tctgccggaa ctctgtcgaa ggatgaaatt gaaaaaggag 2040 aaacataaac ctcggaagga ggttgaaaaa tgcgatctaa attggtattt aaattgtgaa 2100 actgcagaac ataatccttt ggggctaatt cctttaatac gttcaacgca tcatctttat 2160 ttcccgtatt aatcgccttt gcatatgcat cgttggccgt ctgctgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccatt ctaggacgtc tccgtccttg tcgatgtatg 2280 ctttgacgtc cgatgctgat ttagctccct gaatgttcgg atggaaatgt gttgaccgac 2340 taggggaaac caagtcgaag aatctgttat tcttgcactg gtatttccct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct cgtgaagctc tcgacagatc ttgatgaatt 2460 tcttcgaagt cggggtttct agggtttgca attgggaaag tgcctcttcc tttgtaagag 2520 agcactttgg atatgtgagg aaatagtttt tggcatttac tctaaaacga cgtggggaag 2580 ccataaaacc tgtcgttttg attggcgtcc ctcaacttat ctatgtgatt ggtgtctgga 2640 gtcctatata taggtaagac accatatggc agaattgtaa ttttgaaaag aaaattactt 2700 taattcaaat tccctatagc ggccactcgt ctaatatt 2738 //