ID AM285298; SV 1; linear; genomic RNA; STD; VRL; 6296 BP. XX AC AM285298; XX DT 30-JUN-2006 (Rel. 88, Created) DT 30-JUN-2006 (Rel. 88, Last updated, Version 1) XX DE Chrysanthemum virus B gene for polyprotein, isolate Punjab INDIA XX KW alkylated DNA repair protein; polyprotein; RNA dependent RNA polymerase; KW viral RNA helicase. XX OS Chrysanthemum virus B OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-6296 RA Singh L.; RT ; RL Submitted (28-JUN-2006) to the INSDC. RL Singh L., Plant Virus Lab Floriculture Division, Institute of Himalayan RL Bioresource Tech., P.O. Box - 6, Palampur, Distt. Kangra, Himachal Pradesh RL 176 061, INDIA. XX RN [2] RA Singh L., Hallan V., Ram R., Zaidi A.A.; RT "Molecular characterization of genomic RNA of Chrysanthemum virus B"; RL Unpublished. XX DR MD5; 5bacf2b72cc17624ade5a90b9360205f. XX FH Key Location/Qualifiers FH FT source 1..6296 FT /organism="Chrysanthemum virus B" FT /host="Chrysanthemum" FT /isolate="Punjab INDIA" FT /mol_type="genomic RNA" FT /country="India:Punjab" FT /db_xref="taxon:12165" FT CDS <1..6240 FT /product="polyprotein" FT /db_xref="GOA:Q14QP7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008041" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR027450" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:Q14QP7" FT /protein_id="CAK97712.1" FT /translation="TYRSPMEENVGAYDSSVQAAIASTSANYHREAEVSNFQFFNYYLR FT PIAKRHLIEAGIYLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEF FT LKLRNSKLSTISKINRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPC FT LKEREAKYLFLHDELHYWSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYA FT YEVKKKNFLFYPDGVRSEGYEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSI FT TRGEAAGPTMRSFGPFEATACNGLDPLTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQS FT SMAKLTQLLPCPTGEEIVFVQEILKSCDRHQHSENHGLVQTGLKIFMGQVTLELSCPKI FT LADVFETVLEISLHEFIKNLEPFTVDVQLKELKWNNVWTLELKDDGLADEFLDPVRMIE FT ERFGRGEYVAVPDRTSAGYYLAKPSLAKLRGPLIEIEQRVLRITLAAICYKSLSNSDGT FT IASINEIAAFFRMICAKPFLRPAKYKVYDLYGEGGAIGLQKYMRSRWAHHVRFYWANIG FT LLWFRSNYKFYQKFLTAQPDGHGTYKSLMHPWSKVMHEVTNHQFHSSKTSNYSWLRCER FT STDKPTETCGVHGGARSEAVGGGRKKAESKGSAGVEDPKSDQGEGKDQGEERPVDEAAH FT GELPFHRPQAYFNEEKGCTHGGSGPCSVVLSIRNDGATRLHKFPNAGPAQNRYAGFYSK FT NGVGYSYNGGEHQSLNWPGWISVWMRLVGIPEIYNCCLVQRYDENAKIGMHSDDEECFV FT TGGPIYTVNIEGRATFMTTCKEGKTKEITSFELGPGDLFEMPGGFQETHKHAVFETSKD FT RLSVTFRLMKQICQDEQKDHEETDTSGGKKAGEAEETEQPNTEKENPDEEGAGNEEGEH FT GSSNSRNKEREQGNDGSDCTNTAESGAEAFTRHFNGCKVSVHAEKLPYTYNTTDCGGNG FT NCFWLCLANELGLCPFRGKKLALEYDLGSAGANETARSCAGEGVYAVDEAIACAASVFR FT VAIKIYQPELSVMTVFEPTKGERVIYLELSGEHFRLMRIINGCVVKAMASALNRKESEV FT MHVIEENCDPMMVTSLWNGEGVDLGVFHSLLELFSIKALIFEGSREVLYNREGRFEASF FT EIKGDHIEHVHRKKGACNALFEECGKTHEVKAESLELLNRAGTLLNYESTLARARRLAD FT SLCSGTTGVVSSSLFNKKPNLFPVQFREKNESLSRDVLAVIGTLGSGKSTILKNFFKIN FT LGRKVLYVSPRRALLNEFQRGVCGCSRNQEERKAARKKGQENWDFMTFETFILKCSNLP FT SGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAGDPCQSDYDNERDRAWLSTMRSDVE FT QLLEGQSYKFNVQSHRFNNENFRGRLPCEITEKNVAEPRLEEHLLYTGCEELVLIMDEY FT SKVFLVSSFEEKKIIETHFPVCEQRKVYTFGESTGLNFRVGTIIITNVSAATSEKRWLT FT ALSRFSDNVCFVNLLGTDWNGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFS FT TLIGKDAGKREEKLIGDPWLKCMIDLGQTEDVEEVELLEEVMQEEWFKTHLPQADLEGV FT RARWVHKIMLKEAREVRMGDIVSEQFTDDYPKELGTNLTNAAERFETIYPRHRASDTVT FT FIMAVKKRLRFSRPAVEKAKLQEAKLYGQFLLNEFLKKVPLKQAHNTTMMERAKFDFEE FT KKTSKSAVIIENHAGRSCRDWMIEVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVL FT CRFAPYMRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGICTESDYEAFDASQD FT QYIVAFELALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMAIML FT FTFLRYNIKDSEHINSIGDDMCASEPPCIKKEHEGFLSKLKLKAKVFFLAKPTLCGWHL FT CSDGIYKKPQLVLERMGSAKEKNNLANCLDNYAIEVSYAYNLRERAVNRMDEEELEAAY FT NCVRIIIKNKKLLKSDILSFYSSIEKQI" FT mat_peptide 2272..2634 FT /product="alkylated DNA repair protein" FT mat_peptide 3796..4599 FT /product="viral RNA helicase" FT mat_peptide 5065..6198 FT /product="RNA dependent RNA polymerase" XX SQ Sequence 6296 BP; 1854 A; 1233 C; 1621 G; 1588 T; 0 other; acatacagaa gtccaatgga ggagaatgtt ggtgcatatg actcaagtgt tcaagcagca 60 attgccagca catcagcgaa ttatcacagg gaggcagagg taagcaactt ccagtttttc 120 aattattatc ttcgccccat tgcgaagcgc cacttaattg aagctggtat atacctaagt 180 ccatactcgg cagtaccaca ttcacacgcc gcatgtaaga cccttgagaa ccatctattg 240 tataatgtat taccacccct tgtagacaat agatttcatt ttgtaggaat taaacaatca 300 aagttagaat tccttaaatt aaggaatagt aaattaagta ctatatctaa aataaatagg 360 tttgtgacca gtgccgacaa agcaaggtac ggctctgatt ttgtcaagaa ggtgagtaaa 420 ccacatgtag gatttaagcg tcatgaatta caggtagaga caccaacttt gcgtgatctc 480 ttaccttgtt tgaaggagag agaagctaaa tacctctttc ttcacgatga gttgcattac 540 tggagcaagg aggacttaat cagtttgtta gaagtgctgc agcctgaaat gatgttgggc 600 accatggtgt acccacccga actgctattc ggatctaatc gaagcttgaa cccatggtgt 660 tatgcttatg aggtcaagaa gaaaaatttc cttttttacc ctgatggggt gcggagtgag 720 ggctatgaac agcctttaaa cgggggttac ttgctggaat gtggcaagat taccctcgtc 780 gacggcacgg tgtacaaggt tgatatccta tgcagtaaat tcgcgcacca cttagtctct 840 attacgcgtg gagaagctgc agggccgact atgcgctcat ttgggccctt cgaagcgacg 900 gcgtgcaatg gcttggatcc cctcactaga gacgtgtcct gtagcttccc aattccctat 960 gaggtagttt cgaaggttta caggtatttg aagaccctca ggaagcccga tgaacaatcc 1020 tccatggcga aactcacaca actacttcct tgccctacag gcgaggaaat cgttttcgtg 1080 caggaaattc tcaaatcttg tgatcgccac caacacagtg aaaaccatgg attagtgcag 1140 acagggctta agatcttcat ggggcaagtt actttggagt taagctgccc aaagatcttg 1200 gctgacgttt tcgaaacagt tttagaaata agtctgcatg aattcatcaa gaatcttgag 1260 ccattcacag tcgacgtgca attaaaagaa ctcaagtgga ataatgtatg gactctagag 1320 ttaaaggatg atgggctcgc tgacgagttt ttagatcctg ttaggatgat cgaagaaagg 1380 ttcggccgtg gagaatacgt cgcagtgcct gacagaacaa gtgccggtta ttaccttgcc 1440 aagccaagcc tggccaaact gcggggtcct ctgatcgaga ttgagcaaag agtgctcagg 1500 atcacgttag ctgctatttg ttacaagagt ttgagtaata gtgatggcac catcgcttca 1560 atcaacgaaa tagctgcttt ctttaggatg atatgcgcca agcctttctt acgtccggca 1620 aaatacaagg tttacgatct ctatggagaa gggggagcta taggtctaca aaaatacatg 1680 agaagtcgtt gggcgcatca cgttaggttc tactgggcaa acatcggact attgtggttt 1740 agaagtaact acaaatttta ccagaagttt ttgaccgcgc aacccgatgg ccacggcact 1800 tacaagagtt taatgcaccc atggagtaag gtaatgcatg aagtgaccaa tcaccaattc 1860 cactcaagta aaacgagtaa ttactcatgg ctcaggtgtg agcgcagcac tgataaaccg 1920 actgaaacct gcggagtgca tggaggggct agatcagaag cagtgggcgg tggtaggaag 1980 aaagcagaaa gcaagggcag cgccggtgta gaagatccaa aaagtgatca gggcgaagga 2040 aaggaccaag gggaagagag acccgtggat gaagctgctc atggcgaatt gcccttccac 2100 aggccgcagg cgtactttaa tgaagaaaaa gggtgcacac acggtggcag tggcccttgc 2160 agtgtcgttt tgagcatccg aaatgatgga gctacacgtc tccataaatt cccaaacgcc 2220 ggaccggctc aaaataggta cgccggtttt tactctaaaa atggcgtagg gtactcgtat 2280 aatgggggag agcaccaaag cctaaactgg cctggctgga tcagtgtttg gatgagactt 2340 gttggcatac ctgaaattta taactgctgt ttggtgcaac gttacgacga gaatgcaaaa 2400 attgggatgc acagtgatga tgaggaatgt tttgtcaccg gcggtcccat atacaccgtt 2460 aatattgagg ggcgcgccac tttcatgacc acctgcaagg aaggaaagac taaagaaatt 2520 acaagttttg aactaggacc cggagacttg ttcgagatgc ccgggggctt ccaggagact 2580 cataaacatg ctgtatttga gactagcaaa gacaggcttt ccgtgacatt tagactaatg 2640 aaacaaatct gccaagatga acagaaagat cacgaagaga cagacacaag tggtggaaaa 2700 aaagctgggg aggcagaaga gacagagcag ccgaacaccg aaaaagaaaa tccagatgaa 2760 gaaggtgctg ggaacgagga aggtgagcat gggagttcaa acagcagaaa caaggagcga 2820 gaacaaggaa acgacggtag cgattgcaca aatactgctg aatccggggc cgaagctttt 2880 accaggcatt ttaatggctg caaggtgagc gtgcacgcag aaaaactccc atacacgtac 2940 aatactaccg attgcggcgg taatggaaac tgcttctggc tttgcttagc taatgaattg 3000 ggcctgtgcc ctttcagggg aaagaaactg gccttggagt acgacctggg ttcagcaggg 3060 gcaaatgaga ctgcgcgcag ttgcgctgga gagggagtgt acgctgtaga tgaagccatt 3120 gcatgtgcgg caagtgtatt cagagtcgcc atcaaaatat accagcccga gttgagtgtc 3180 atgaccgttt ttgaaccgac taaaggagag cgagtgattt atttagaatt aagcggggag 3240 cacttcagac tcatgcgtat aatcaatgga tgtgtagtca aagctatggc ttctgcactc 3300 aatcgcaaag aaagtgaggt aatgcatgtg atcgaagaaa attgtgatcc aatgatggtg 3360 acgagccttt ggaatggtga aggtgttgac ttaggtgttt tccattcact gctggaactt 3420 ttctcgatta aagctttgat ttttgaggga tcaagggaag tgctgtacaa cagggaagga 3480 cgttttgaag cttcttttga aataaaaggt gaccatatag aacacgtgca taggaaaaaa 3540 ggggcttgca atgcactgtt tgaagagtgt ggcaagactc acgaggtgaa ggcagaatct 3600 ctagagctac taaatagagc aggtactttg cttaattacg agagtaccct tgctagagct 3660 aggagactcg cagatagttt gtgttccgga acaacgggtg tcgtgagctc ttctttgttc 3720 aacaaaaaac caaacctttt cccggtccaa tttagggaga aaaatgagtc gctcagtagg 3780 gatgtgcttg cagtgattgg caccttggga tcgggcaaga gcacgattct caaaaacttc 3840 ttcaaaatca atttgggtcg caaggtgttg tacgtatccc cacgtagagc ccttttgaat 3900 gaattccaga gaggcgtctg tggttgctca agaaatcaag aagaacgcaa agcggcccgg 3960 aagaaaggcc aggagaattg ggacttcatg acttttgaga ccttcatact caaatgttct 4020 aatttacctt cagggatggc tgtcgtactt gatgagatac agctgtaccc acctggatac 4080 ctggacatga tctgctatct gacaaaaaag ggcgtgcact taattgttgc tggtgatcct 4140 tgccagagtg attatgataa cgaacgtgat cgagcatggc taagcactat gagaagtgat 4200 gtggaacaac tgcttgaggg ccaaagctat aagttcaatg tgcagagtca tcgcttcaat 4260 aatgagaatt tcaggggtcg gctgccttgc gaaattactg agaaaaatgt tgcggagcca 4320 cggttggaag agcatttgtt gtacacaggg tgtgaggagt tagtgctgat catggatgaa 4380 tatagtaagg ttttcctcgt ttcctctttc gaggaaaaga aaattattga gacccatttc 4440 cctgtgtgcg agcaacggaa agtgtacaca tttggtgaat ctactggttt gaatttcaga 4500 gtgggtacca taatcatcac aaatgtctca gctgccacct cagagaaacg ctggttaaca 4560 gccctgagcc gatttagtga taatgtctgt ttcgtcaacc tcttgggaac tgactggaat 4620 ggtctatttg gtttgtataa acatcgagct ttgggtcact tccttagtaa gagggcgcag 4680 ttgaaagacc tattggacca cttaccaggc caaccacaat tccagaatgg tttctcaacg 4740 ttaataggta aggacgcagg gaaaagggaa gaaaagctca ttggtgatcc gtggcttaag 4800 tgcatgattg atctaggtca gactgaggat gtggaggaag tggagctcct tgaggaagtt 4860 atgcaagaag aatggttcaa aactcaccta ccccaagccg acctggaggg cgtacgtgct 4920 aggtgggtac acaagataat gctcaaagag gcaagggaag tgcgaatggg tgacattgtg 4980 tctgaacaat tcacagatga ttatcccaaa gaattgggaa ccaatctcac gaatgcagct 5040 gagcgtttcg agaccattta ccctaggcat agagcttcag ataccgtgac cttcataatg 5100 gctgttaaaa aacggttgag attttcacga ccggctgttg agaaagcgaa acttcaggaa 5160 gccaaactgt atgggcaatt ccttctgaat gaatttctca agaaagtacc tttgaagcaa 5220 gctcataaca ctactatgat ggagcgagca aagtttgatt ttgaggaaaa gaaaacaagc 5280 aaaagtgcgg tcattataga gaatcatgcg ggtcggtcat gtagagactg gatgattgaa 5340 gtagggctca tcttctccaa aagtcaatta tgcacaaagt ttgataatag gtttagggtc 5400 gcgaaggcag cacagagtat tgtttgcttc caacacgccg tactttgccg tttcgcgcct 5460 tatatgcgct acattgaagc taaactccat gaggcgctac ctagcagatt ctatattcac 5520 tcagggaagg gtctggatga gcttaatgag tgggttatca agggcaaatt cgagggcatc 5580 tgcactgagt cagattatga ggccttcgac gcttctcagg atcagtatat tgttgctttt 5640 gagttagccc taatggagta tctaggtttg ccaagggact taattgagga ctacgcgttc 5700 atcaagtgtc atttagggtc caaattaggc aacttcgcga tcatgcggtt ttccggggag 5760 gctagtacgt ttctgtttaa tactatggcc atcatgctct tcaccttctt gcgatacaat 5820 attaaagaca gcgagcacat caactcaatt ggggatgaca tgtgcgcatc cgaacccccg 5880 tgcatcaaga aagagcatga gggttttttg agcaagttaa aattgaaagc caaagtattc 5940 tttctggcta aaccaactct ttgcggatgg catctctgtt ctgatgggat atataagaag 6000 ccgcagttgg tattggaacg tatgggtagt gctaaagaga agaataatct agccaactgt 6060 ctagacaatt acgccattga ggtttcctac gcctataacc tccgtgagcg agcggttaat 6120 aggatggatg aggaggagtt ggaggctgcc tacaattgcg tcaggataat catcaagaat 6180 aagaagctcc taaagtccga tatccttagt ttttactcta gtatcgagaa acaaatttaa 6240 atacgcttag gttgaagcta taggattgtt ataaggatgt gttagttaat ttgttg 6296 //