ID AM282558; SV 1; linear; genomic RNA; STD; VRL; 6284 BP. XX AC AM282558; XX DT 19-JUN-2006 (Rel. 88, Created) DT 19-JUN-2006 (Rel. 88, Last updated, Version 1) XX DE Chrysanthemum virus B mRNA for polyprotein, isolate Arunachal Pradesh INDIA XX KW alkylated DNA repair protein; polyprotein; RNA dependent RNA polymerase; KW viral RNA helicase. XX OS Chrysanthemum virus B OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-6284 RA Singh L.; RT ; RL Submitted (17-JUN-2006) to the INSDC. RL Singh L., Plant Virus Lab Floriculture Division, Institute of Himalayan RL Bioresource Tech., P.O. Box - 6, Palampur, Distt. Kangra, Himachal Pradesh RL 176 061, INDIA. XX RN [2] RA Singh L., Hallan V., Ram R., Zaidi A.A.; RT "Molecular characterization of genomic RNA of Chrysanthemum virus B"; RL Unpublished. XX DR MD5; ffc650e181dd2772fa1527a9a5f1cabc. XX FH Key Location/Qualifiers FH FT source 1..6284 FT /organism="Chrysanthemum virus B" FT /host="Chrysanthemum" FT /isolate="Arunachal Pradesh" FT /mol_type="genomic RNA" FT /country="India:Arunachal Pradesh" FT /db_xref="taxon:12165" FT CDS <1..6228 FT /product="polyprotein" FT /db_xref="GOA:Q17UU9" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR008041" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR027450" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:Q17UU9" FT /protein_id="CAK54345.1" FT /translation="TYRSPMEENVGAYDSSVQAAIASTSANYYREAEVNNFQFFNYYLR FT PIAKRHLIEAGIYLSPYSAVPHSHAACKTLENLLLYNVLPPLVDNRFHFVGIKQSKLEF FT LKLRNSKLSTISKINRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPC FT LKEREAKYLFLHDELHYWSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYA FT YEVKKKNFLFYPDGVRSEGHEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSI FT TRGEAAGPTMRSFGPFNNGVHGLGSPHTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQS FT SMAKLTQLLPCPTGEEIVFVQEILKSCDRHQHSENHGLVQTGLKIFMGQVTLELSCPKI FT LADVFETVLEISLHEFIKNLEPFTVDVQLKELKWNNVWTLELKDDGLADEFLDPVRMIE FT ERFGRGEYVAVPDRTSAGYYLAKPSLAKLRGPLIEIEQRVLRITLAAICYKSLSNSDGT FT IASINEIAAFFRMICAKPFLRPAKYKVYDLYGEGGAIGLQKYMRSRWAHHVRFYWANIG FT LLWFRSNYKFYQKFLTAQPDGHGTYKSLMHPWSKVMHEVTNHQFHSSKTSNYSWLRCER FT STDKPTETCGVHGGARSGRVVGRKAESKGSAGGEDPKSDQGEGKDQGEERPVDEAAHGG FT CPPQPQAYSNEEKGAHTVQCPCSVVLSIRNDGATRLHKFQTPDRLKNRYAGFYSKNGVG FT YSYNGGEHQSLNWPGWISVWMRLVGIPEIYNCCLVQRYDENAKIGMHSDDEECFVTGGP FT IYTVNIEGRATFMTTCKEGKTKEITSFELGPGDLFEMPGGFQETHKHAVFETSKDRLSV FT TFRLMKQICQDEQKDHEETDTSGGKKAGEAEETEQPNTEKENPDEEGAGNEEGEHGSSN FT SRNKEREQGNDGSDCTNTAESGAEAFTRHFNGCKVSVHAEKLPYTYNTTDCGGNGNCFW FT LCLANELGLCPFRGKKLALEYDLGSAGANETARSCAGEGVYAVDEAIACAASVFSVAIK FT IYQPELSVMTVFEPTKGERVIYLELSGEHFRLMRIINGCVVKAMASALNRKESEVMHVI FT EENCDPMMVTSLWNGEGVDLGVFHSLLELFSIKALIFEGSREVLYNREGRFEASFEIKG FT DHIEHVHRKKGACNALFEECGKTHEVKAESLELLNRAGTLLNYQSTLARARRLADSLCS FT GTTGVVSSSLFNKKPNLFPVQFRNTSEFLSRDVLAVIGTLGSGKSTILKNFFKINLGRK FT VLYVSPRRALLNEFQRGVCGCSRNQEERKAARKKGQENWDFMTFETFILKCSNLPSGMA FT VVLDEIQLYPPGYLDMICYLTKKGVHLIVAGDPCQSDYDNERDRAWLSVMRSDVEQLLE FT GQSYRFNVQSHRFNNANFRGRLPCEMIGADVAGSPSEEHLLYTGCEELVQIMDEYSKVF FT LVSSFDEKKIIETHFPMDEKRKVYTFGESTGLNFRVGTIIITNVSAATSEKRWLTALSR FT FSENICFVNLLGTDWNGLLGLYKHRALGHFLCKRAQLKDLLDHLPGQPQFQNGFSTLIG FT KDAGKRKDKLIGDPWLKCMIDLGQTEDVEEVELLEEVMQEEWFKTHLPQADLEGVRARW FT VHKIMLKEAREVRMGDIVSEQFTDDYPKELGTNLTNAAERFETIYPRHRASDTVTFIMA FT VKKRLRFSRPAVEKAKLQEAKLYGQFLLNEFLKKVPLKQAHNTTMMERAKFDFEEKKTS FT KSAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFA FT PYMRYIEAKLHEVLPSRFYIHSGKGLDELNEWVIKGKFEGICTESDYEAFDASTDQYIV FT AFELALMEYLGLPRDLMEDYAFIKFHLGSNLPNFAIMRFSGEASTFLFNTMANMLFPFL FT RYNIRDSAHICFAGDDMCASERLCIKKDHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDG FT IYKKPQLVLERMCIAKEKNNLANCLDNYAIEVSYAYKLGERAVNRMDEEELEAAYNCVR FT IIIKNKKLLKSDILGFYSSIEKQI" FT mat_peptide 2268..2634 FT /product="alkylated DNA repair protein" FT mat_peptide 3792..4599 FT /product="viral RNA helicase" FT mat_peptide 5061..6198 FT /product="RNA dependent RNA polymerase" XX SQ Sequence 6284 BP; 1841 A; 1249 C; 1616 G; 1578 T; 0 other; acatacagaa gtccaatgga ggagaatgtt ggtgcatatg actcaagtgt tcaagcagca 60 attgccagca catcagcgaa ttattacagg gaggcagagg taaataactt ccagttcttc 120 aattattatc ttcgccccat tgcgaagcgc cacttaattg aagctggtat atacctaagt 180 ccatactcgg cagtaccaca ttcacacgct gcatgcaaga cccttgagaa ccttctattg 240 tataatgtgt taccacctct tgtagacaat agatttcatt ttgtaggaat taaacaatca 300 aagttagaat ttcttaaatt aaggaatagt aaattaagca ctatatctaa aataaatagg 360 tttgtgacca gcgctgacaa agcaaggtat ggttctgatt ttgttaagaa ggtaagtaaa 420 ccacatgttg gattcaagcg tcatgaattg caggtagaga caccaacttt gcgtgatctc 480 ttaccttgtt tgaaagagag ggaggccaaa tacctctttc tccatgatga gttgcattac 540 tggagcaagg aggacttaat cagtttgtta gaagtgctgc agcctgaaat gatgttgggc 600 accatggtgt acccacccga actgctattc ggatctaatc gaagcttgaa cccatggtgt 660 tatgcttatg aggtcaagaa gaaaaatttc cttttttacc ctgatggggt gcggagtgag 720 ggccatgaac agcctttaaa tgggggttac ttgctggaat gtggcaagat taccctagtc 780 gatggcacgg tgtacaaggt tgatatccta tgcagtaaat tcgcgcacca cttggtttcc 840 ataacgcgtg gagaagctgc agggccgact atgcgctcat ttgggccctt caacaacggc 900 gtgcatgggc ttggatcccc ccacacaaga gacgtgtcct gtagcttccc aattccctat 960 gaggtagttt cgaaggttta caggtatttg aagaccctca ggaagcccga tgaacaatcc 1020 tccatggcga aactcacaca actacttcct tgccctacag gcgaggaaat cgttttcgtg 1080 caggaaattc tcaaatcttg tgatcgccac caacacagtg aaaaccatgg attagtgcag 1140 acagggctta agatcttcat ggggcaagtt actttggagt taagctgccc aaagatcttg 1200 gctgacgttt tcgaaacagt tttagaaata agtctgcatg aattcatcaa gaatcttgag 1260 ccattcacag tcgacgtgca attaaaagaa ctcaagtgga ataatgtatg gactctagag 1320 ttaaaggatg atgggctcgc tgacgagttt ttagatcctg ttaggatgat cgaagaaagg 1380 ttcggccgtg gagaatacgt cgcagtgcct gacagaacaa gtgccggtta ttaccttgcc 1440 aagccaagcc tggccaaact gcggggtcct ctgatcgaga ttgagcaaag agtgctcagg 1500 atcacgttag ctgctatttg ttacaagagt ttgagtaata gtgatggcac catcgcttca 1560 atcaacgaaa tagctgcttt ctttaggatg atatgcgcca agcctttctt acgtccggca 1620 aaatacaagg tttacgatct ctatggagaa gggggagcta taggtctaca aaaatacatg 1680 agaagtcgtt gggcgcatca cgttaggttc tactgggcaa acatcggact attgtggttt 1740 agaagtaact acaaatttta ccagaagttt ttgaccgcgc aacccgatgg ccacggcact 1800 tacaagagtt taatgcaccc atggagtaag gtaatgcatg aagtgaccaa tcaccaattc 1860 cactcaagta aaacgagtaa ttactcatgg ctcaggtgtg agcgcagcac tgataaaccg 1920 actgaaacct gcggagtgca tggaggggct agatcagggc gggtggtagg aagaaaagca 1980 gaaagtaagg gcagcgccgg tggagaagat ccaaaaagtg atcagggcga aggtaaggac 2040 caaggggaag agagacccgt ggatgaagct gctcatggcg gatgccctcc acagccgcag 2100 gcgtactcta atgaagaaaa aggtgcacac acggtgcagt gcccttgcag tgtcgttttg 2160 agcatccgaa atgatggagc tacacgtctc cataaattcc aaacgccgga ccggctcaaa 2220 aataggtacg ccggttttta ctctaaaaat ggcgtagggt actcgtataa tggaggagag 2280 caccaaagcc taaactggcc tggctggatc agtgtttgga tgagacttgt tggtatacct 2340 gaaatttata actgctgttt ggtgcaacgt tacgacgaga atgcaaaaat tgggatgcac 2400 agtgatgatg aggaatgttt tgtcaccggc ggtcccatat acaccgttaa tattgagggg 2460 cgcgccactt tcatgaccac ctgcaaggaa ggaaagacta aagaaattac aagttttgaa 2520 ctaggacccg gagacttgtt cgagatgccc gggggcttcc aggagactca taaacatgct 2580 gtatttgaga ctagcaaaga caggctttcc gtgacattta gactaatgaa acaaatctgc 2640 caagatgaac agaaagatca cgaagagaca gacacaagtg gtggaaaaaa agctggggag 2700 gcagaagaga cagagcagcc gaacaccgaa aaagaaaatc cagatgaaga aggtgctggg 2760 aacgaggaag gtgagcatgg gagttcaaac agcagaaaca aggagcgaga acaaggaaac 2820 gacggtagcg attgcacaaa tactgctgaa tccggggccg aagcttttac caggcatttt 2880 aatggctgca aggtgagcgt gcacgcagaa aaactcccat acacgtacaa tactaccgat 2940 tgcggcggta atggaaactg cttctggctt tgcttagcta atgaattggg cctgtgccct 3000 ttcaggggaa agaaactggc cttggagtac gacctgggtt cagcaggggc aaatgagact 3060 gcgcgcagtt gcgctggaga gggagtgtac gctgtagatg aagccattgc atgtgcggca 3120 agtgtattca gtgtcgccat caaaatatac cagcctgagt tgagtgtcat gaccgttttt 3180 gaaccgacta aaggagagcg agtgatttat ttagaattaa gcggggagca cttcagactc 3240 atgcgtataa tcaatggatg tgtagtcaaa gctatggctt ctgcactcaa tcgcaaagaa 3300 agtgaggtaa tgcatgtgat cgaagaaaat tgtgatccaa tgatggtgac gagcctttgg 3360 aatggtgaag gtgttgactt aggtgttttc cattcactgc tggaactttt ctcgattaaa 3420 gctttgattt ttgagggatc aagggaagtg ctgtacaaca gggaaggacg ttttgaagct 3480 tcttttgaaa taaaaggtga ccatatagaa cacgtgcata ggaaaaaagg ggcttgcaat 3540 gcactgtttg aagagtgtgg caagactcac gaggtgaagg cagaatctct agagctacta 3600 aatagagcag gtactttgct taattaccag agtacccttg ctagagctag gagactcgca 3660 gatagtttgt gttccggaac cacgggtgtc gtgagctctt ctttgttcaa caaaaaacca 3720 aaccttttcc cggtccaatt taggaacact agtgaattcc tcagtaggga tgtgcttgca 3780 gtgattggca ccttgggatc gggcaagagc acgattctca aaaacttctt caaaatcaat 3840 ttgggtcgca aggtgttgta cgtatcccca cgtagagccc ttttgaatga attccagaga 3900 ggcgtctgtg gttgctcaag aaatcaagaa gaacgcaaag cggcccggaa gaaaggccag 3960 gagaattggg acttcatgac ttttgagacc ttcatactca aatgttctaa tttaccttca 4020 gggatggctg tcgtacttga tgagatacag ctgtacccac ctggatacct ggacatgatc 4080 tgctatctga caaaaaaggg cgtgcactta attgttgctg gtgatccttg ccagagtgat 4140 tatgataatg agcgcgatcg tgcctggtta agtgtaatga ggagcgacgt ggaacagcta 4200 ctggagggcc aaagttacag attcaatgtg cagagccatc gcttcaacaa cgcaaacttt 4260 aggggtcggt tgccttgtga gatgattgga gcggacgttg caggatcgcc atcggaggaa 4320 catttgctat atacagggtg tgaggagctt gtgcaaataa tggatgaata cagcaaggtc 4380 ttcctcgttt catctttcga tgagaaaaaa ataatcgaga cccacttccc catggatgag 4440 aagcggaagg tatacacgtt tggtgagtcc actggtctga attttagggt gggcacgatt 4500 ataattacaa atgtttctgc agccacctca gagaagcgct ggttaacagc actgagccgt 4560 tttagtgaga acatatgctt cgtcaacctc ctggggactg actggaatgg tcttttgggt 4620 ctgtacaaac atcgggcgtt agggcatttc ctttgcaagc gtgctcaatt gaaagatttg 4680 ctagaccatt tgcctggcca accgcaattt caaaatggct tttcgacatt gattggtaag 4740 gatgcaggaa aaagaaagga caagctcatt ggtgatccct ggctcaagtg catgattgat 4800 ctaggtcaga ctgaggatgt ggaggaagtg gagctccttg aggaagttat gcaagaagaa 4860 tggttcaaaa ctcacctacc ccaagccgac ctggagggcg tacgtgctag gtgggtacac 4920 aagataatgc tcaaagaggc aagggaagtg cgaatgggtg acattgtgtc tgaacaattc 4980 acagatgatt atcccaaaga attgggaacc aatctcacga atgcagctga gcgtttcgag 5040 accatttacc ctaggcatag agcttcagat accgtgacct tcataatggc tgttaaaaaa 5100 cggttgagat tttcacgacc ggctgttgag aaagcgaaac ttcaggaagc caaactgtat 5160 gggcaattcc ttctgaatga atttctcaag aaagtacctt tgaagcaagc tcataacact 5220 actatgatgg aacgcgcaaa gtttgatttt gaggagaaaa agacgagcaa aagtgcagcc 5280 atcatagaga atcacgctgg ccgatcatgt agggattggt taattgatgt tgggctcata 5340 ttctctaaaa gtcagctatg tacaaaattt gataatagat tcagggttgc gaaagcggca 5400 cagagtatag tctgtttcca acacgctgtg ctctgccgtt tcgctcccta catgcgttac 5460 atcgaagcaa agctccatga ggtactgcct agccggttct acatacactc agggaagggt 5520 ttggatgagc ttaacgaatg ggtgattaaa ggtaagttcg aggggatctg cacagagtcg 5580 gattacgagg cctttgatgc ttccacagat cagtacatcg ttgcttttga gttagcccta 5640 atggagtacc tggggttacc aagggaccta atggaggatt atgctttcat caagttccat 5700 ttggggtcca acttacctaa tttcgctatc atgcggtttt ctggggaagc cagcacattt 5760 ttgtttaaca ccatggccaa tatgctcttc cccttcttgc gttacaacat tagagatagt 5820 gcgcacatct gcttcgctgg cgatgacatg tgtgcctcag aacgtctatg catcaagaag 5880 gaccacgagg gcttcttaaa taaattgaag ttgaaggcca aggtgttctt tgtagataaa 5940 cccacctttt gtggatggca tttgtgcccg gacggtatat acaagaaacc ccaattggtg 6000 ctggaacgaa tgtgcatcgc taaggagaag aacaatctag ccaattgtct agataactat 6060 gccatcgagg tctcatacgc ctacaaactt ggcgagcggg cagtgaatag gatggatgaa 6120 gaggagttag aagcggcata caactgtgtc agaataatta tcaagaacaa gaaactctta 6180 aaatctgaca tccttgggtt ctactctagc atagaaaaac aaatttaaat acgcttaggt 6240 tgtagctata ggattgttat atggatgtgt tagttaattt gttg 6284 //