ID   AM260937; SV 1; linear; genomic RNA; STD; VRL; 1846 BP.
XX
AC   AM260937;
XX
DT   11-MAY-2006 (Rel. 87, Created)
DT   04-JUN-2006 (Rel. 88, Last updated, Version 2)
XX
DE   Plum pox virus partial gene for polyprotein, genomic RNA, isolate PPV-Troy6
XX
KW   coat protein; NIb; nuclear inclusion protein b; polyprotein.
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1846
RA   Palkovics L.;
RT   ;
RL   Submitted (25-APR-2006) to the INSDC.
RL   Palkovics L., Plant Pathology, Corvinus University of Budapest, Menesi Road
RL   44., H-1118, HUNGARY.
XX
RN   [2]
RA   Szathmary E., Dragojszki K., Hrisztova D., Stoev A., Tobias I.,
RA   Palkovics L.;
RT   "Molecular characterization of some Plum pox virus isolates originated from
RT   Troyan region (Bulgaria)";
RL   Unpublished.
XX
DR   MD5; 3e83dc3eedf855bf17d91ac6b339c8f6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1846
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica cultivar Hanita"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="PPV-Troy6"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria:Troyan"
FT                   /collection_date="2004"
FT                   /clone="B236.6.3"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1629
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q1JRJ6"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q1JRJ6"
FT                   /protein_id="CAJ98535.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAMTYSLLKLGYHPDTHDCICRYFVNG
FT                   DDLVLAVHPAYESIYDELQEHFSQLGLNYTFATKTENKEELWFMSHKGVLYDGMYIPKL
FT                   EPERIVSILEWDRSNEPIHRLEAICASMVEAWGYKELLREIRKFYSWVLEQAPYNALSK
FT                   DGKAPYIAETALKKLYTDSEASETEIERYLEAFYNDIDDSRDSNIVIHQADEKEDDEEV
FT                   DAGKPTVVTAPAATVATAQPAPVIQPAVQTTTPMFNPIFTPATTQPAIRPVSPISGATP
FT                   QSFGVYGNEDASPSTSNTLVNTRRDRDVDAGSIGTFAVPRLKTMTSKLSLPKVKGKAIM
FT                   NLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDYDVTDEEMSIILNGLMVWCIENGT
FT                   SPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPR
FT                   YGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLDGNVGTQ
FT                   EEDTERHTAGDVNRNMHNLLGVRGV"
FT   mat_peptide     <1..636
FT                   /product="nuclear inclusion protein b"
FT                   /note="NIb"
FT   mat_peptide     637..1626
FT                   /product="coat protein"
FT   3'UTR           1630..1846
XX
SQ   Sequence 1846 BP; 551 A; 390 C; 431 G; 474 T; 0 other;
     ggcaataaca gtggccagcc ttcgacagtt gttgacaata cactcatggt tattttggca        60
     atgacatatt cactcctgaa gcttggatac catccggata cacacgattg catttgtcgg       120
     tacttcgtga atggtgatga tcttgtcctt gcagtgcacc cagcatacga gagcatttat       180
     gatgagcttc aagaacactt ttcccaactt ggattgaatt acacattcgc cacaaagact       240
     gaaaacaagg aagagctgtg gtttatgtca cataaaggtg ttctctacga tggcatgtac       300
     attcccaagc tggagcctga gagaattgta tcaatacttg aatgggatag atcaaatgag       360
     ccaatccatc gattggaggc aatttgtgct tcaatggtgg aagcctgggg ttataaggag       420
     ctgctgaggg agatccggaa attttacagt tgggttcttg aacaagcacc atataatgct       480
     ctttcaaaag atggaaaagc cccgtacata gcagagacgg cactcaagaa actctatact       540
     gattctgaag cgtctgagac ggaaattgag agatatcttg aagcatttta caatgatatt       600
     gatgatagcc gtgactccaa cattgttata caccaggctg atgaaaagga ggacgatgaa       660
     gaagttgatg caggaaaacc cactgtggta actgcaccgg cagcaactgt ggcaacagct       720
     caaccagctc cagtgataca acctgcagtt caaaccacaa caccaatgtt caaccccatt       780
     ttcactccag caacaactca gcctgcgata agaccagttt ctccaatttc aggggccaca       840
     ccgcagtctt ttggagttta tggaaatgag gatgcatcac ctagcacctc aaacactttg       900
     gtgaacacaa gaagggatag ggacgtcgat gcaggatcga ttggaacttt cgcagtgcca       960
     cgcttaaaaa caatgacatc gaagttatct ctaccaaagg tgaaaggaaa agcaattatg      1020
     aacttaaatc atttggcaca ttacagtcct gcacaagttg atttatcaaa cacacgagct      1080
     ccacaatcct gtttccagac ttggtatgaa ggagttaagc gtgattacga tgtcacggat      1140
     gaggaaatga gcatcatttt gaatggcctg atggtttggt gcattgaaaa cggaacgtct      1200
     cctaacatca acggaatgtg ggtgatgatg gatggggaga cacaagtgga gtatccaata      1260
     aagccattgt tggatcacgc gaaacccact tttagacaaa ttatggcaca tttcagtaac      1320
     gtggctgaag cgtatattga aaaacggaat tacgagaaag catacatgcc aaggtatgga      1380
     attcagcgca acctgacaga ttacagcctc gccagatacg cctttgattt ttacgaaatg      1440
     acttcaacaa cgcctgtgcg tgcacgtgaa gctcatatac agatgaaggc agcagcattg      1500
     agaaatgttc agaatcgttt atttggcttg gatggaaacg tcggaacaca agaagaggac      1560
     acagagaggc acaccgctgg tgacgtgaat cgcaacatgc acaacctcct cggtgtgagg      1620
     ggagtgtagt ggtctcggta tctatcataa actctacttg ggtgagagtc tagtcaccca      1680
     attgttttta gattcctgtt agcatccttt tctccgcttt aattgcggca cattcagtga      1740
     ggttgtacct ccacatgtgt tagtctttta ttgtcgaccc caggcccttg tatctgatgt      1800
     agcgagtgtt tcactccatt cgggttatag ttcttgtgca agagac                     1846
//