ID   AM260936; SV 1; linear; genomic RNA; STD; VRL; 1846 BP.
XX
AC   AM260936;
XX
DT   11-MAY-2006 (Rel. 87, Created)
DT   20-FEB-2008 (Rel. 94, Last updated, Version 3)
XX
DE   Plum pox virus partial gene for polyprotein, genomic RNA, isolate PPV-Troy5
XX
KW   coat protein; NIb; nuclear inclusion protein b; polyprotein.
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1846
RA   Palkovics L.;
RT   ;
RL   Submitted (25-APR-2006) to the INSDC.
RL   Palkovics L., Plant Pathology, Corvinus University of Budapest, Menesi Road
RL   44., H-1118, HUNGARY.
XX
RN   [2]
RA   Szathmary E., Dragojszki K., Hrisztova D., Stoev A., Tobias I.,
RA   Palkovics L.;
RT   "Molecular characterization of some Plum pox virus isolates originated from
RT   Troyan region (Bulgaria)";
RL   Unpublished.
XX
DR   MD5; 296f04a14681d1114acc034bb943f562.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1846
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica cv. Gabrovska"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="PPV-Troy5"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria:Troyan"
FT                   /collection_date="2004"
FT                   /clone="B236.5.2"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1629
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q1JRJ7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q1JRJ7"
FT                   /protein_id="CAJ98534.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAMTYSLLKLGYHPDTHDCICRYFVNG
FT                   DDLVLAVHPAYESIYDELQEHFSQLGLNYTFATKTENKEELWFMSHKGVLYDGMYIPKL
FT                   EPERIVSILEWDRSNEPIHRLEAICASMVEAWGYKELLREIRKFYSWVLEQAPYNALSK
FT                   DGKAPYIAETALKKLYTDSEASETEIERYLEAFYNDIDDSLDSNIVIHQADEKEDNEEV
FT                   DAGKPTVVTAPAATVATTQPAPVIQPAIQTTTPMFNPIFTPATTQPAIRPVSPISRATP
FT                   QSFGVYGNEDASPSTSNTLVNTGRDRDVDAGSIGTFAVPRLKTMTSKLSLPKVKGKAIM
FT                   NLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDYDVTDEEMSIILNGLMVWCIENGT
FT                   SPNINGMWVMMDGETQGEYPIKPLLDPAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPR
FT                   YGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLDGNVGTQ
FT                   EEDTERHPAGDVNRNMHNLLGVRGV"
FT   mat_peptide     <1..636
FT                   /product="nuclear inclusion protein b"
FT                   /note="NIb"
FT   mat_peptide     637..1626
FT                   /product="coat protein"
FT   3'UTR           1630..1846
XX
SQ   Sequence 1846 BP; 554 A; 394 C; 429 G; 469 T; 0 other;
     ggaaacaata gcgggcaacc ttcgacagtt gttgacaaca cactcatggt tattttggca        60
     atgacatatt cactcctgaa gcttggatac catccggata cacacgattg catttgtcgg       120
     tacttcgtga atggtgatga tcttgtcctt gcagtgcacc cagcatacga gagcatttat       180
     gatgagcttc aagagcactt ttcccaactt ggattgaatt acacattcgc cacaaagact       240
     gaaaacaagg aagagctgtg gtttatgtca cataaaggtg ttctctacga tggcatgtac       300
     attcccaagc tggagcccga gaggattgta tcaatacttg aatgggacag atcaaatgag       360
     ccaatccatc gattggaggc aatttgtgct tcaatggtgg aagcgtgggg ttacaaagag       420
     ctgctgaggg agattcggaa attttacagt tgggttcttg aacaagcacc atataatgct       480
     ctttcaaaag atggaaaagc cccgtacata gcagagacgg cactcaagaa actctatact       540
     gattctgaag cgtctgagac ggaaatcgag agatatcttg aagcatttta caatgatatt       600
     gatgatagcc ttgactccaa cattgttata caccaggctg atgaaaagga ggacaatgaa       660
     gaagttgatg caggaaaacc cactgtagta actgcaccgg cagcaactgt ggcaacaact       720
     caaccagctc cagtgataca acctgcaatt caaaccacaa caccaatgtt caaccccatt       780
     ttcactccag caacaactca gcctgcgata agaccagttt ctccaatttc aagggccaca       840
     ccgcagtctt ttggagttta tggaaatgag gatgcatcac ctagcacctc aaacactttg       900
     gtgaacacag gaagggatag ggacgtcgat gcaggatcga ttggaacttt cgctgtgcca       960
     cgcttaaaaa caatgacatc gaagttatct ctaccgaagg tgaaaggaaa agcaattatg      1020
     aacttaaatc atttggcaca ttacagtcct gcacaagttg atttatcaaa cacacgagct      1080
     ccacaatcct gtttccagac ttggtatgaa ggagttaagc gtgattacga tgtcacagat      1140
     gaggaaatga gcatcatttt gaatggcctg atggtttggt gcatcgaaaa cggaacgtct      1200
     cctaacatca acggaatgtg ggtgatgatg gatggggaga cacaagggga gtatccaata      1260
     aagccattgt tggatcccgc gaaacccact tttagacaaa ttatggcaca tttcagtaac      1320
     gtggctgaag cgtatattga aaaacggaat tacgagaaag catacatgcc aaggtatgga      1380
     attcagcgca acctgacaga ttacagcctc gccagatacg cctttgattt ttacgaaatg      1440
     acttcaacaa cgcctgtgcg tgcacgtgaa gctcatattc agatgaaggc agcagcattg      1500
     agaaatgttc agaatcgttt gtttggcttg gatggaaacg tcggaacaca agaagaggac      1560
     acagagagac accccgctgg tgacgtgaat cgcaacatgc acaacctcct cggtgtgagg      1620
     ggagtgtagt ggtctcggta tctatcataa actctacttg ggtgagagtc tagtcaccca      1680
     attgttttta gattcctgtt agcatccttt tctccgcttt aattgcggca cattcagtga      1740
     ggtcgtacct ccacatgtgt tagtctttta ttgtcgaaca caggcccttg tatctgatgt      1800
     agcgagtgtt tcactccatt cgggttatag ttcttgtgca agagac                     1846
//