ID   AM260935; SV 1; linear; genomic RNA; STD; VRL; 1657 BP.
XX
AC   AM260935;
XX
DT   11-MAY-2006 (Rel. 87, Created)
DT   20-FEB-2008 (Rel. 94, Last updated, Version 3)
XX
DE   Plum pox virus partial gene for polyprotein, genomic RNA, isolate PPV-Troy4
XX
KW   coat protein; NIb; nuclear inclusion protein b; polyprotein.
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1657
RA   Palkovics L.;
RT   ;
RL   Submitted (25-APR-2006) to the INSDC.
RL   Palkovics L., Plant Pathology, Corvinus University of Budapest, Menesi Road
RL   44., H-1118, HUNGARY.
XX
RN   [2]
RA   Szathmary E., Dragojszki K., Hrisztova D., Stoev A., Tobias I.,
RA   Palkovics L.;
RT   "Molecular characterization of some Plum pox virus isolates originated from
RT   Troyan region (Bulgaria)";
RL   Unpublished.
XX
DR   MD5; 3cbec05459047251b15e63d76219538e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1657
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica cv. Kjustendilska"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="PPV-Troy4"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria:Troyan"
FT                   /collection_date="2004"
FT                   /clone="B236.4.1"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1629
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q1JRJ8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q1JRJ8"
FT                   /protein_id="CAJ98533.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAMTYSLLKLGYHPDTHDCICRYFVNG
FT                   DDLVLAVHPAYERIYDELQEHFSQLGLNYTFATKTENKEELWFMSHKGVLYDGMYIPKL
FT                   EPERIVSILEWDRSNEPIHRLEAICASMVEAWGYKELLREIRKFYSWVLEQAPYNALSK
FT                   DGKAPYIAETALKKLYTDSEASETEIERYLEAFYNDTDDSLDSNIVIHQADEKEDDEEV
FT                   DAGKPTVVTAPAATVATTQPAPVIQPAIQTTTPMFNPIFTPATTQPAIRPVSPISRATP
FT                   QSFGVYGNEDASPSTSNTLVNTGRDRDVDAGSIGTFAVPRLKTMTSKLSLPKVKGKAIM
FT                   NLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDYDVTDEEMSIILNGLMVWCIENGT
FT                   SPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPR
FT                   YGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLDGNVGTQ
FT                   KEDTERHTAGDVNRNMHNLLGVRGV"
FT   mat_peptide     <1..636
FT                   /product="nuclear inclusion protein b"
FT                   /note="NIb"
FT   mat_peptide     637..1626
FT                   /product="coat protein"
FT   3'UTR           1630..>1657
XX
SQ   Sequence 1657 BP; 519 A; 352 C; 387 G; 399 T; 0 other;
     gggaacaata gtgggcagcc ttcgacagtt gttgacaaca cactcatggt tattttggca        60
     atgacatatt cactcctgaa gcttggatac catccggata cacacgattg catttgtcgg       120
     tacttcgtga atggtgatga tcttgtcctt gcagtgcacc cagcatacga gagaatttat       180
     gatgagcttc aagagcactt ttcccaactt ggattgaatt acacattcgc cacaaagact       240
     gaaaacaagg aagagctgtg gttcatgtca cataaaggtg ttctctacga tggcatgtac       300
     attcccaagc tggagcccga gaggattgta tcaatacttg aatgggacag atcaaatgag       360
     ccaatccatc gattggaggc aatttgtgct tcaatggtgg aagcgtgggg ttacaaagag       420
     ctgctgaggg agattcggaa attttacagt tgggttcttg aacaagcacc atataatgct       480
     ctttcaaaag atggaaaagc cccgtacata gcagagacgg cactcaagaa actctatact       540
     gattctgaag cgtctgagac ggaaatcgag agatatcttg aagcatttta caatgatact       600
     gacgatagcc ttgactccaa cattgttata caccaggctg atgaaaagga ggacgatgaa       660
     gaagttgatg caggaaaacc cactgtagta actgcaccgg cagcaactgt ggcaacaact       720
     caaccagctc cagtgataca acctgcaatt caaaccacaa caccaatgtt caaccccatt       780
     ttcactccag caacaactca acctgcgata agaccagttt ctccaatttc aagggccaca       840
     ccgcagtctt ttggagttta tggaaatgag gatgcatcac ctagcacctc aaacactttg       900
     gtgaacacag gaagggatag ggacgtcgat gcaggatcga ttggaacttt cgctgtgcca       960
     cgcttaaaaa caatgacatc gaagttatct ctaccgaagg tgaaaggaaa agcaattatg      1020
     aacttaaatc atttggcaca ttacagtcct gcacaagttg atttatcaaa cacacgagct      1080
     ccccaatcct gtttccagac ttggtatgaa ggagttaagc gtgattacga tgtcacagat      1140
     gaggaaatga gcatcatttt gaatggcctg atggtttggt gcatcgaaaa cggaacgtct      1200
     cctaacatca acggaatgtg ggtgatgatg gatggggaga cacaagtgga gtatccaata      1260
     aagccattgt tggatcacgc gaaacccact tttagacaaa ttatggcaca tttcagtaac      1320
     gtggctgaag cgtatattga aaaacggaat tacgagaaag catacatgcc aaggtatgga      1380
     attcagcgca acttgacaga ttacagcctc gccagatacg cctttgattt ttacgaaatg      1440
     acttcaacaa cgcctgtgcg tgcacgtgaa gctcatatac agatgaaggc agcagcattg      1500
     agaaatgttc agaatcgttt gtttggcttg gatggaaacg tcggaacaca aaaagaggac      1560
     acagagagac acaccgctgg tgacgtgaat cgcaacatgc acaacctcct cggtgtgagg      1620
     ggagtgtagt ggtctcggta tctatcataa actctac                               1657
//