ID   AM260934; SV 1; linear; genomic RNA; STD; VRL; 1846 BP.
XX
AC   AM260934;
XX
DT   11-MAY-2006 (Rel. 87, Created)
DT   04-JUN-2006 (Rel. 88, Last updated, Version 2)
XX
DE   Plum pox virus partial gene for polyprotein, genomic RNA, isolate PPV-Troy2
XX
KW   coat protein; NIb; nuclear inclusion protein b; polyprotein.
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1846
RA   Palkovics L.;
RT   ;
RL   Submitted (25-APR-2006) to the INSDC.
RL   Palkovics L., Plant Pathology, Corvinus University of Budapest, Menesi Road
RL   44., H-1118, HUNGARY.
XX
RN   [2]
RA   Szathmary E., Dragojszki K., Hrisztova D., Stoev A., Tobias I.,
RA   Palkovics L.;
RT   "Molecular characterization of some Plum pox virus isolates originated from
RT   Troyan region (Bulgaria)";
RL   Unpublished.
XX
DR   MD5; faf24f875958e1b15287daaf41429fd4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1846
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica cultivar Stanley"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="PPV-Troy2"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria:Troyan"
FT                   /collection_date="2004"
FT                   /clone="B236.2.2"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1629
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q1JRJ9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q1JRJ9"
FT                   /protein_id="CAJ98532.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAMTYSLLKLGYHPDTHDCICRYFVNG
FT                   DDLVLAVHPAYESIYDELQEHFSQLGLNYTFATKTENKEELWFMSHKGVLYDDMYIPKL
FT                   EPERIVSILEWDRSNEPIHRLEAICASMVEAWGYKELLREIRKFYSWVLEQAPYNALSK
FT                   DGKAPYIAETALKKLYTDTEASETEIERYLEAFYDDINDDGEFNVVVHQADEREDEEEV
FT                   DAGKPIVATAPAATSPILQPPPVIQPAPRTTAPMLNPIFTSATTQPATKPVSRVSGPQL
FT                   QTFGTYGNEDASPSNSNALVNTNRDRDVDAGSIGTFTVPRLKAMTSKLSLPKVKGKAIM
FT                   NLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDYDVTDDEMSIILNGLMVWCIENGT
FT                   SPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPR
FT                   YGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLDGNVGTQ
FT                   EEDTERHTAGDVNRNMHNLLGVRGV"
FT   mat_peptide     <1..636
FT                   /product="nuclear inclusion protein b"
FT                   /note="NIb"
FT   mat_peptide     637..1626
FT                   /product="coat protein"
FT   3'UTR           1630..>1846
XX
SQ   Sequence 1846 BP; 557 A; 393 C; 428 G; 468 T; 0 other;
     ggaaacaata gcggtcagcc ttcgacagtt gttgacaata cactcatggt tattctggca        60
     atgacatatt cactccttaa gcttggatat catccggata cacacgattg catttgtcgg       120
     tacttcgtga atggtgatga tcttgtcctt gcagtgcacc cagcatacga gagcatttat       180
     gatgagcttc aagaacactt ttcccaactt ggattgaatt acacattcgc cacaaagact       240
     gaaaacaagg aagagctgtg gtttatgtca cataaaggcg ttctctacga tgacatgtac       300
     attcctaagc tagagcctga gaggattgta tcaatacttg aatgggacag atcaaatgag       360
     ccaatccatc gattggaggc aatttgtgca tcaatggtgg aagcgtgggg ttataaggag       420
     ctgctgaggg agatccggaa attttacagt tgggttcttg aacaagcacc atacaatgct       480
     ctttcaaaag atggaaaagc cccgtacatt gcggagacag cactgaagaa gctttacact       540
     gacactgaag catctgagac agaaattgag cgatatcttg aagcttttta cgacgacatt       600
     aacgatgatg gtgagttcaa cgttgttgtg caccaagctg acgaaagaga agacgaggag       660
     gaagttgatg caggtaagcc gattgtagcc actgcaccgg cagcaactag cccaatactt       720
     caaccacctc cagtcataca gcctgcaccc cggactacgg cgccaatgct caaccccatt       780
     ttcacgtcag caacaactca accagcaaca aaaccagttt cacgggtgtc aggacctcaa       840
     ctgcaaactt ttggaacata tggtaatgag gatgcatcac ctagcaactc aaacgcgcta       900
     gtcaacacaa acagagacag ggacgtcgat gcaggatcaa ttggaacttt tacagtgcca       960
     cgtttgaagg caatgacttc gaaactatct ctgccaaagg tgaaaggaaa ggctattatg      1020
     aacttgaacc atttagcaca ttatagtcct gcacaggttg acttgtccaa cacgagagct      1080
     ccgcagtctt gtttccaaac ttggtatgaa ggagttaagc gagattatga tgtcacggac      1140
     gatgaaatga gcatcatttt aaatggtctt atggtttggt gcatagagaa tggaacatcc      1200
     ccgaatatca atggaatgtg ggtgatgatg gatggggaaa cacaagtgga gtatccaata      1260
     aagccattgt tggatcatgc gaaacccact tttagacaaa ttatggcaca tttcagtaac      1320
     gtggctgaag cgtatattga aaaacgaaat tatgaaaaag catacatgcc aaggtatgga      1380
     attcagcgca acctgacaga ctacagcctc gccagatatg cctttgattt ttacgaaatg      1440
     acttcaacga cacccgtacg ggcacgtgaa gctcatatcc agatgaaggc agcagcattg      1500
     agaaatgttc aaaatcgttt atttggcttg gatggaaacg tcggaacaca agaagaggac      1560
     acagagagac acaccgctgg tgatgttaat cgcaacatgc acaacctcct cggtgtgagg      1620
     ggagtgtagt ggtctcggta tctatcataa actctacctg ggtgagagtc taaccatcca      1680
     gttgttttta gattcctgtt agcatccttt tctccgcttt aatagcagta cattcagtga      1740
     ggttttacct ccatatgttc tagtctgtta ttgtcgaaca caggcccttg tatctgatgt      1800
     agcgagtgct tcactccatt cgggttatag ttcttgtgca agagac                     1846
//