ID   AM260933; SV 1; linear; genomic RNA; STD; VRL; 1799 BP.
XX
AC   AM260933;
XX
DT   11-MAY-2006 (Rel. 87, Created)
DT   20-FEB-2008 (Rel. 94, Last updated, Version 3)
XX
DE   Plum pox virus partial gene for polyprotein, genomic RNA, isolate PPV-Troy1
XX
KW   coat protein; NIb; nuclear inclusion protein b; polyprotein.
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1799
RA   Palkovics L.;
RT   ;
RL   Submitted (25-APR-2006) to the INSDC.
RL   Palkovics L., Plant Pathology, Corvinus University of Budapest, Menesi Road
RL   44., H-1118, HUNGARY.
XX
RN   [2]
RA   Szathmary E., Dragojszki K., Hrisztova D., Stoev A., Tobias I.,
RA   Palkovics L.;
RT   "Molecular characterization of some Plum pox virus isolates originated from
RT   Troyan region (Bulgaria)";
RL   Unpublished.
XX
DR   MD5; 001efdba8e956ed3823270f540250236.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1799
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica cv. Cacanska rodna"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="PPV-Troy1"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria:Troyan"
FT                   /collection_date="2004"
FT                   /clone="B236.1.1"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1582
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q1JRK0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q1JRK0"
FT                   /protein_id="CAJ98531.1"
FT                   /translation="VILAMTYSLLKLGYHPDTHDCICRYFVNGDDLVLAVHPAYESIYD
FT                   ELQEHFSQLGLNYTFATKTENKEELWFMSHKGVLYDGMYIPKLEPERIVSILEWDRSNE
FT                   PIHRLEAICASMVEAWGYKELLREIRKFYSWVLEQAPYNALSKDGKAPYIAETALKKLY
FT                   TDSEASETEIERYLEAFYNDTDDSLDSNFVIHQADEKEDDEEVDAGKPTVVTAPAATVA
FT                   TTQPAPGIQPAIQTTTPMFNPIFTPATTQPAIRPVSPIYRATPQSFGVYGNDDASPSTT
FT                   NTSVNTGRDRDVDAGSIGTFAVPRFKTMTSKLSLPKVKGKAIMNLNHLAHYSPAQVDLS
FT                   NTRAPQSCFQTWYEGVKRDYDVTDEEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQ
FT                   VEYPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYA
FT                   FGFYEMTSATPVRAREAHIQMKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNM
FT                   HNLLGVRGV"
FT   mat_peptide     <1..589
FT                   /product="nuclear inclusion protein b"
FT                   /note="NIb"
FT   mat_peptide     590..1579
FT                   /product="coat protein"
FT   3'UTR           1583..1799
XX
SQ   Sequence 1799 BP; 537 A; 381 C; 420 G; 461 T; 0 other;
     ggttattttg gcaatgacat attcactcct gaagcttgga taccatccgg atacacacga        60
     ctgcatttgt cggtacttcg tgaatggtga tgatcttgtc cttgcagtgc acccagcata       120
     cgagagcatt tatgatgagc ttcaagagca cttttcccaa cttggattga attacacatt       180
     cgccacaaag actgaaaaca aggaagagct gtggtttatg tcacataaag gtgttctcta       240
     cgatggcatg tacattccca agctggagcc tgagaggatt gtatcaatac ttgaatggga       300
     cagatcaaat gagccaatcc atcgattgga ggcaatttgt gcttcaatgg tggaagcgtg       360
     gggttataag gagctgctga gggagatccg gaaattttac agttgggttc ttgaacaagc       420
     accatataat gctctttcaa aagatggaaa agccccgtac atagcagaga cggccctcaa       480
     gaaactctat actgattctg aagcatctga gacggaaatt gagagatatc ttgaagcttt       540
     ttacaatgat accgacgata gccttgactc caactttgtt atacaccagg ctgatgaaaa       600
     ggaggatgat gaagaagttg atgcaggaaa acccactgta gtaactgcac cggcagcaac       660
     tgtggcaaca actcaaccag ctccagggat acaacctgca attcaaacca caacaccaat       720
     gttcaacccc attttcactc cagcaacaac tcagcctgcg ataagaccag tttctcctat       780
     ttatagggcc acaccgcagt cttttggagt ttatggaaat gatgatgcat cacctagcac       840
     cacaaacact tcggtgaaca caggaaggga tagggacgtc gatgcaggat cgatcggaac       900
     tttcgcagtg ccacgattta aaacaatgac gtcgaagtta tctctaccga aggtgaaagg       960
     aaaagcaatt atgaacttaa atcatttggc acattacagt cctgcacaag ttgatttatc      1020
     aaacacacga gctccacaat cctgtttcca gacttggtat gaaggagtta agcgtgatta      1080
     cgatgtcaca gatgaggaaa tgagcatcat tttgaatggc ctgatggttt ggtgcatcga      1140
     aaacggaacg tctcctaaca tcaacggaat gtgggtgatg atggatgggg agacacaagt      1200
     ggagtatcca ataaagccat tgttggatca cgcgaaaccc acttttagac aaattatggc      1260
     acatttcagt aacgtggctg aagcgtatat tgaaaaacgg aattacgaga aagcatacat      1320
     gccaaggtat ggaattcagc gcaacctgac agattacagc ctcgccagat acgcctttgg      1380
     tttttacgaa atgacttcag caacgcctgt gcgtgcacgt gaagctcata tacagatgaa      1440
     ggcagcagca ttgagaaatg ttcagaatcg tttatttggc ttggatggaa acgtcggaac      1500
     acaagaagag gacacagaga gacacaccgc tggtgacgtg aatcgcaaca tgcacaacct      1560
     cctcggtgtg aggggagtgt agtggtctcg gtatctatca taaactctac ttgggtgaga      1620
     gtctagtcac ccaattgttt ttagattcct gttagcatcc ttttctccgc tttaattgcg      1680
     gcacattcag tgaggttata cctccacatg tgttagtctt ttattgtcga acacaggccc      1740
     ttgtatctga tgtagcgagt gtttcactcc attcgggtta tagttcttgt gcaagagac       1799
//