ID AM260702; SV 1; circular; genomic DNA; STD; VRL; 2729 BP. XX AC AM260702; XX DT 05-MAY-2006 (Rel. 87, Created) DT 05-MAY-2006 (Rel. 87, Last updated, Version 1) XX DE Tomato yellow leaf curl China virus complete genome, isolate Y244 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW pre-coat protein; replication enhancer protein; KW replication-associated protein; transcription enhancer protein. XX OS Tomato yellow leaf curl China virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2729 RA Zhou X.; RT ; RL Submitted (26-APR-2006) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, No.268, Kaixuan RL Road, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RA Liao B., Zhou X.; RT "Molecular characterization of Geminiviruses and their associated DNAa RT molecules infecting crops and weeds in Yunnan"; RL Unpublished. XX DR MD5; 22c048f4363d5cfd203d14fb5e498e52. XX FH Key Location/Qualifiers FH FT source 1..2729 FT /organism="Tomato yellow leaf curl China virus" FT /isolate="Y244" FT /mol_type="genomic DNA" FT /country="China:Yunnan" FT /isolation_source="tobacco" FT /db_xref="taxon:185793" FT CDS 128..475 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:Q1JRN5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q1JRN5" FT /protein_id="CAJ98471.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARDYGEASRRYSHFHSRLEGASPAELRQPLYGSCCCPHCPRHQKTNVVKQAHVS FT EAHDVPDVQKP" FT CDS 288..1058 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q1JRN4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q1JRN4" FT /protein_id="CAJ98472.1" FT /translation="MAKRLDDIVISTPASKVRRRLNFDSPYTGRAVAPTVRVTRRQMWS FT NRPMYRKPMMYRMYRSPDVPRGCEGPCKVQSYEARHDVSHTGKVICVSDVTRGNGITHR FT VGKRFCIKSIYVIGKIWMDENIKVKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP FT STATVKNDLRDRFQVRRKFYSTVTGGQYACKEQALVKRFIRVNTHVVYNHQEQAKYENH FT TENALLLYMVSTHASNPVYATLKVRIYFYDSQMN" FT CDS complement(1055..1459) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q1JRN3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q1JRN3" FT /protein_id="CAJ98473.1" FT /translation="MDSRTGELLTATQSENGVYIWTVKNPLYFKITKHHERPFLRNHDI FT ITLQVQFNYNLRKALGIHKCFLTCQIWTHLHPQTSHFLRVFKYQFLKYLDRLGVISINN FT CIRAFRYVLYDVLNGTIDVIENHDIKFNIY" FT CDS complement(1200..1604) FT /gene="AC2" FT /product="transcription enhancer protein" FT /db_xref="GOA:Q1JRN2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q1JRN2" FT /protein_id="CAJ98474.1" FT /translation="MRSSSPSTGHSTQVPIKVQHRIAKKTTRRRRIDLPCGCSYFVALG FT CHNHGFTHRGTTHCNSIREWRVYLDGQKSPIFQDNQTPRETISEEPRHHHITSPIQLQP FT EESVGDTQMFSNLPNLDSFTSSDLAFLKSI" FT CDS complement(1507..2592) FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q1JRN1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q1JRN1" FT /protein_id="CAJ98475.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIQTLETPVNKLFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPHRSAHFHPNIQGAKSSTDVKSYM FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMEEYISPFSSSSFDQVPEELDEWAVDNVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAVKNAIFVTLNGPL FT YSGSYQGATPNRQEDNQTTTN" FT CDS complement(2142..2435) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q1JRN0" FT /protein_id="CAJ98476.1" FT /translation="MGLLTCMFSSNSKESSNVKIKDSSISHPHTGQHISIRTFRELKAQ FT QMSNPTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2729 BP; 726 A; 533 C; 608 G; 862 T; 0 other; accggatggc cgcgcgattt tttaaagtgg tccccatgtg cgcgttcgtc caataatatg 60 cgctcctcaa agcttagtta tgaaatggtc ccctataaaa cttagccccc acgtatttat 120 gttaaagatg tgggatccat tgcttaatga gttccctgaa accgtgcacg gttttaggtg 180 tatgttagca attaagtatt tgcagttagt cgaaaataca tactctcccg atacattagg 240 ttacgattta atccgtgatt taatttcagt tatccgtgct agagactatg gcgaagcgtc 300 tcgacgatat agtcatttcc actcccgcct cgaaggtgcg tcgccggctg aacttcgaca 360 gcccctatac gggtcgtgct gttgccccca ctgtccgcgt caccagaaga caaatgtggt 420 caaacaggcc catgtatcgg aagcccatga tgtaccggat gtacagaagc cctgatgttc 480 caagggggtg tgaaggccca tgtaaagttc aatcttatga ggcccgtcat gatgtgtcgc 540 atactggtaa ggttatttgt gtatcggatg ttactcgtgg taatggaatt actcaccgtg 600 ttggtaagag gttctgtatt aaatccattt acgtcattgg gaagatatgg atggacgaga 660 atattaaagt gaagaatcac acgaatactg taatgttttt ccttgttaga gatcgacgtc 720 ctagtggtac acctatggat tttcaacaag tgtttaattg ttatgacaat gaacccagca 780 ctgctactgt aaaaaacgat ttaagggatc gttttcaagt tcgtcgtaaa ttctattcta 840 cggttacggg cggacagtat gcgtgtaagg agcaggcttt ggtgaagaga ttcattcgtg 900 ttaacactca tgttgtttac aaccatcaag aacaggcgaa gtacgagaat catactgaga 960 atgcattatt gttgtatatg gtgtctactc atgcgagtaa tcctgtatat gcgactttga 1020 aagtccgcat ctatttctat gattcacaaa tgaattaata aatattgaat tttatatcat 1080 gattttcaat tacatctatt gttccattca atacatcgta taatacatat ctaaaagccc 1140 taatacaatt gttaatgcta atcacgccta atctatctaa atatttaaga aattggtatt 1200 taaatactct taagaaatgc gaggtctgag gatgtaaatg agtccagatt tggcaggtta 1260 gaaaacattt gtgtatcccc aacgctttcc tcaggttgta gttgaattgg acttgtaatg 1320 tgatgatgtc gtggttcctc agaaatggtc tctcgtggtg tttggttatc ttgaaatata 1380 ggggattttt gaccgtccag atatacacgc cattctctga ttgagttgca gtgagtagtt 1440 cccctgtgcg tgaatccatg attgtgacag cctaaagcaa cgaagtatga acagccacaa 1500 ggtagatcaa ttcgtcgtcg tctggttgtc ttcttggcga ttcggtgttg caccttgata 1560 ggaacctgag tagagtggcc cgttgagggt gacgaagatc gcattcttta ctgcccagtt 1620 tcgaagtgcg gaattctttt cctcttctag atactcttta tagctggaat tgggtcctgg 1680 attgcagagg aagatagtgg ggatcccgcc tttaatttga actggttttc cgtatttggt 1740 gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta agtagtgcgg 1800 atctacgtca tcaatgacgt tgaaccaagc atcattactg tatacctttg ggcttagatc 1860 taaatgaccg cacaaataat tatgtggtcc taatgacctg gcccacatcg tcttccccgt 1920 tctactatca ccctctatga ctatacttat cggtcttaaa ggccgcgcag cggcactcac 1980 aacattatcg accgcccatt catcaagttc ttcgggaact tggtcaaaag aagaggaaga 2040 aaaaggagaa atatattcct ccattggagg agtaaaaatc ctatctaaat tactatttaa 2100 attatgaaat tgtaaaacaa aatctttagg agccttctcc cttagtatat tgagggccga 2160 agctttggac cctgaattga ttgcctcggc atatgcgtcg ttggcagatt ggcaacctcc 2220 tctagccgat cttccatcga tctggaaaac tccatgatca agcacgtctc cgtctttttc 2280 catgtaggat ttgacatctg ttgagctttt agctccctga atgttcggat ggaaatgtgc 2340 tgacctgtgt ggggatgtga gatcgaagaa tctttgattt ttacattgga actttccttc 2400 gaattggatg agaacatgca ggtgaggagt cccatcttcg tgtagttctc tacagattct 2460 gatgaatagt ttatttactg gcgtttctag ggtttgaatt tgggaaagtg cctcttcttt 2520 agtgagagag cagtgtggat atgttaggaa ataattcttg gcatttattc tgaatttatt 2580 tgggggagcc attgactggt caatcggtgt ctctcaaatt tggctatgca aatggtgtct 2640 ggggtcttat ttatatgtgg acaccaaatg gcattatcgt aattcccaaa agaaattcaa 2700 aattcaaaag cggccatccg tataatatt 2729 //