ID AM260206; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC AM260206; XX DT 20-DEC-2006 (Rel. 90, Created) DT 20-DEC-2006 (Rel. 90, Last updated, Version 1) XX DE Squash leaf curl China virus complete DNA-A genome, isolate G25 XX KW AC1 gene; AC2 gene; AC3 gene; AC5 gene; AV1 gene; AV2 gene; coat protein; KW replication protein. XX OS Squash leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Zhou X.; RT ; RL Submitted (20-APR-2006) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268, RL Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RA Guo X.J., Zhou X.P.; RT "First report of nucleotide sequence of a bipartite geminivirus isolated RT from squash in China"; RL Unpublished. XX DR MD5; 9e8e2c15a4ed2b9bee723b9511bc4eee. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Squash leaf curl China virus" FT /isolate="G25" FT /mol_type="genomic DNA" FT /db_xref="taxon:223323" FT CDS 43..459 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q6ZX78" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6ZX78" FT /protein_id="CAJ97382.1" FT /translation="MKFTLHGLFITWGPLNRLPHQVLIHNMWDPLMHEFPESVHGLRCM FT LAVKYLQEVEKTYSPDTVGYDLVRDLILVLRAKNYVEATSRYYHFNSRVEGTPTSQLRQ FT PVCFPCSCPHCPRHKGKGLDKQADEQKTQDVQDV" FT CDS 281..1051 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:A1IVX7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A1IVX7" FT /protein_id="CAJ97383.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAVVPIARVTKGKAWT FT NRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPTGTPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(311..829) FT /gene="AC5" FT /product="AC5 Protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:A1IVX8" FT /protein_id="CAJ97384.1" FT /translation="MPFAQNLVSITMHILHRCSAWFIVEHIKNLPKVLWSSCRTTVSNQ FT KKYYTISVIFSFDIFVHPYLSQHVNRFHTKSLSNAMCESGSSCNITDTHHLTNMRDIVP FT RFERLNFTRAFTSPWHIGTSIHPVHLGFSVHRPVCPGLSLCDAGNGDNCTGNIRAVEVE FT TSAYLRRGS" FT CDS complement(1048..1458) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:A1IVX9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A1IVX9" FT /protein_id="CAJ97385.1" FT /translation="MITDSRTGEYITVDRAESGVYIWTVPNPLYFKILKHDIRPCLEEH FT DIIKVQVMFNHNLRKALGLHKCAMTFQIWTGLRPPTGIFLRVFKTQVLKYLDMLGVIGI FT YNVIRAVYHVLDNVLEKTIDVWTTYDVKLNIY" FT CDS complement(1193..1597) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:A1IVY0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A1IVY0" FT /protein_id="CAJ97386.1" FT /translation="MQSSSQSKNHCIPVAKASQPQKKNKNIRRRRVDLPCGCSYYMSIN FT CHDHGFTHRGVHHCGSSREWRVYLDGSKSPIFQNIKTRHQTMSRGTRHNQGAGNVQPQP FT AESTGTSQMCNDFPDMDGLTPADWDFLESL" FT CDS complement(1524..2585) FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:A1IVY1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A1IVY1" FT /protein_id="CAJ97387.1" FT /translation="MAPPKSFKINAKNYFLTYPKCSLTKEEALSQLQTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNIRFFDLVSPSRSAHFHPNIQGAKSASDVKQYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYARAINTGNKEDALKVLKELAPKDYVLQFH FT NMNSNLDRIFPPRAEVYVSPFSVSSFDRVPQELVDWVSVNVGCSAARPNRPIGIVLEGD FT SRTGKTAWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWALKNAIFITIEEPL FT YSGRESIATAEEE" XX SQ Sequence 2739 BP; 736 A; 587 C; 594 G; 822 T; 0 other; accgaatggc cgcgcgattt tttttatgtg ggccctctac caatgaaatt cacgctacat 60 ggcttattta ttacgtgggg accattaaat agacttccgc accaagtttt gatccacaac 120 atgtgggatc cacttatgca cgaatttcct gaaagcgttc atggtctaag gtgcatgcta 180 gcggtgaaat atcttcagga ggtggaaaaa acatattctc cggacacagt cggctacgat 240 cttgtccgcg atctcattct tgttctccgc gcaaagaact atgtcgaagc gaccagccga 300 tattatcatt tcaactcccg cgtcgaaggt acgccgacgt ctcaacttcg acagcccgta 360 tgtttcccgt gcagttgtcc ccattgcccg cgtcacaaag ggaaaggcct ggacaaacag 420 gccgatgaac agaaaaccca agatgtacag gatgtataga agtcccgatg tgccaagggg 480 atgtgaaggc ccttgtaaag ttcagtcgtt cgaatctagg cacgatgtct ctcatattgg 540 taaggtgatg tgtatcagtg atgttacacg aggaaccgga ctcacacatc gcgttggaaa 600 gcgattttgt gtgaaatctg tttacgtgtt gggaaagata tggatggacg aaaatatcaa 660 aactaaaaat cacactaata gtgtaatatt ttttctggtt cgagaccgtc gtcctacagg 720 aactccacag gactttgggg aggtttttaa tatgttcgac aatgaaccaa gcactgcaac 780 ggtgaagaat atgcatcgtg atcgatacca agttctgcgc aaatggcatg ccactgtgac 840 gggaggaaca tacgcatcaa gggagcaagc attagttagg aagtttgtta gggtcaataa 900 ttatgttgtt tacaatcaac aagaggccgg caagtatgag aatcatactg aaaatgcatt 960 aatgttgtat atggcctgta ctcatgcatc gaaccctgtt tacgcgactt tgaaaatccg 1020 gatctatttt tatgattctg taacaaatta atatatattc aatttcacat catatgttgt 1080 ccatacatca atcgtctttt ccaatacatt gtccaataca tggtaaactg ctcttattac 1140 attataaata ccaatcactc ctaacatatc caggtactta aggacctgtg tcttaaagac 1200 tctcaagaaa atcccagtcg gcgggcgtaa gcccgtccat atctggaaag tcattgcaca 1260 tttgtgaagt cccagtgctt tccgcaggtt gtggttgaac attacctgca ccttgattat 1320 gtcgtgttcc tctagacatg gtctgatgtc gtgttttaat attttgaaat ataggggatt 1380 tggaaccgtc cagatataca cgccactctc tgctcgatcc acagtgatgt actcccctgt 1440 gcgtgaatcc gtgatcatgg caatttattg acatgtaata cgagcatccg cacggtagat 1500 caactcgtct gcgtctgatg ttcttattct tcttctgcgg ttgcgatgct ttcgcgaccg 1560 gaatacagtg gttcttcgat tgtgatgaag attgcattct ttaatgccca ctgctttagt 1620 gctgcattct tttcttcatc gagatattct ttgtaactgc tgtttgggcc tttattgcag 1680 aggaagatgg tgggaattcc acctttaatc atgactggct ttccgtactt cgtgttgctt 1740 tgccagtctc tctgggcccc cataaattct ttaaaatgct ttagatagtg tggatcaacg 1800 tcatcaatga cgttgtacca agcatcatta ttgtacactt tagggcttag atccagatgg 1860 ccgcacaagt aattgtgtgg tcctaaagaa cgcgcccacg cagttttgcc cgttctacta 1920 tcaccctcta aaactattcc tatgggtcta ttcggccgcg cagcggaaca ccccacgtta 1980 actgaaaccc aatcgacgag ttcttgcgga actctgtcga atgatgaaac tgaaaaagga 2040 gaaacataca cctcagcacg aggtggaaaa atacgatcta aatttgaatt catgttatga 2100 aattgcaaaa cgtaatcttt gggtgctaat tctttcaaca ctttcaatgc atcttccttg 2160 tttcctgtat ttattgccct tgcgtacgcg tcgtttgctg tttgttgacc tccacgagca 2220 gatcgaccat cgatctggaa gacaccccat tctaacacgt ccccgtcttt gtcgatgtat 2280 tgtttgacgt ccgatgccga tttagctccc tgaatgttcg gatggaaatg tgctgaccga 2340 cttggggaaa ccaagtcgaa gaatctgata ttcttgcact ggaactttcc ttcgaactga 2400 ataagaacgt ggatatgcgg agacccatct tcgtgcaact ctctgcaaat tttgataaat 2460 ttcttcgaag ttggagtttc tagggtttgc aattgggaaa gtgcctcttc tttggttaga 2520 gagcactttg gatatgtgag gaaatagttt tttgcattaa ttttgaaaga cttaggggga 2580 gccatcaaaa cgctcgtttt ggatcggtgt cccttcaaaa atatggtata tcggtgtatg 2640 gagtctcata tatagtttgg acaccaaatg gcaaaatggt aattatgtaa atatctactt 2700 taattcaaaa atgagtaaag cggccattcg tataatatt 2739 //