Dbfetch

Dbfetch

ID   AM238694; SV 1; linear; genomic DNA; STD; VRL; 514 BP.
XX
AC   AM238694;
XX
DT   30-AUG-2006 (Rel. 89, Created)
DT   23-MAR-2007 (Rel. 91, Last updated, Version 3)
XX
DE   Siegesbeckia yellow vein Guangxi virus AV2 gene and partial AV1 gene for
DE   coat protein, isolate G112
XX
KW   AV1 gene; AV2 gene; AV2 protein; coat protein.
XX
OS   Siegesbeckia yellow vein Guangxi virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-514
RA   Zhou X.P.;
RT   ;
RL   Submitted (04-APR-2006) to the INSDC.
RL   Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268,
RL   Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RX   DOI; 10.1111/j.1365-3059.2007.01528.x.
RX   AGRICOLA; IND43887816.
RA   Wu J.B., Cai J.H., Zhou X.P.;
RT   "A new begomovirus associated with yellow vein disease of Siegesbeckia
RT   glabrescens";
RL   Plant Pathol. 56(2):343-343(2007).
XX
DR   MD5; 9c27e3464c9ea7025a3a2bba8797834c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..514
FT                   /organism="Siegesbeckia yellow vein Guangxi virus"
FT                   /host="Siegesbeckia glabrescens"
FT                   /isolate="G112"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Guangxi Province"
FT                   /lat_lon="22.82 N 108.32 E"
FT                   /collected_by="Xueping Zhou"
FT                   /collection_date="01-Dec-2005"
FT                   /PCR_primers="fwd_name: PA, fwd_seq: taatattacckgwkgvccsc,
FT                   rev_name: PB, rev_seq: tggacyttrcawggbccttcaca"
FT                   /db_xref="taxon:379728"
FT   CDS             122..478
FT                   /transl_table=1
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /db_xref="GOA:Q0KFV3"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:Q0KFV3"
FT                   /protein_id="CAJ87654.1"
FT                   /translation="MWDPLLNEFPETVHGFRCMLAIKYLQAVEVTYAPDTVGYDLIREL
FT                   IRILRTKDYGQATCRYSHFHSRLQSTPEVELRQPLPQQCCCPNCPSHKQPQQTGLGPKA
FT                   HVSEAQNLSDVQNT"
FT   CDS             282..>514
FT                   /transl_table=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q0KFV2"
FT                   /db_xref="UniProtKB/TrEMBL:Q0KFV2"
FT                   /protein_id="CAJ87655.1"
FT                   /translation="MAKRPADIVISTPASKVRRRLNFDSPYRSSAAAPTVLVTNNRSRR
FT                   GWAQRPMYRKPRIYRMFRTPDVPRGCEGPCKV"
XX
SQ   Sequence 514 BP; 138 A; 125 C; 109 G; 142 T; 0 other;
     taatattacc ggtgggcccc ctatgttggc tgatctagac cgttgctcaa agctaaatta        60
     aaaaatatcc ccgtacgctt ttgtatattt aaatgttttc cctcttgatt tatatacgaa       120
     aatgtgggat ccattactta acgaattccc tgaaaccgtt cacgggttta gatgtatgct       180
     tgcaattaaa tatttgcaag ccgttgaagt tacttacgct cctgatacgg tgggatacga       240
     tttaattcgt gaacttatac gtattttacg tacaaaggat tatggccaag cgacctgcag       300
     atatagtcat ttccactccc gcctccaaag tacgccggag gttgaacttc gacagcccct       360
     accgcagcag tgctgctgcc ccaactgtcc tagtcacaaa caaccgcagc agacggggtt       420
     gggcccaaag gcccatgtat cggaagccca gaatttatcg gatgttcaga acacctgatg       480
     ttcccagagg ttgtgaaggc ccttgcaaag tcca                                   514
//