ID   AM236850; SV 1; linear; genomic RNA; STD; VRL; 1461 BP.
XX
AC   AM236850;
XX
DT   19-MAR-2008 (Rel. 95, Created)
DT   19-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Potato virus Y partial gene for polyprotein, P1 and helper
DE   component-proteinase, HC-Pro region, genomic RNA, isolate Zhucheng39
XX
KW   helper component-proteinase, HC-Pro; P1; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1461
RA   Li X.;
RT   ;
RL   Submitted (19-MAR-2006) to the INSDC.
RL   Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL   Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN   [2]
RA   Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT   "Sequence comparisons of Potato virus Y isolates from tobacco in China.";
RL   Unpublished.
XX
DR   MD5; 83f56e2198c02038a9a540b43dc2d390.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1461
FT                   /organism="Potato virus Y"
FT                   /host="Nicotiana tabacum"
FT                   /lab_host="Nicotiana tabacum"
FT                   /isolate="Zhucheng39"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhucheng"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1461
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B1GS04"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:B1GS04"
FT                   /protein_id="CAJ87177.1"
FT                   /translation="GLFIVRGSHEGKIYDARSKVTQGVMDSMVQFSSAESFWKGLDGNW
FT                   AQMRYPTDHTCVAGLPVEDCGRVAAIMTHSILPCYKITCPTCAQQYANLPASDLLKILH
FT                   KHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFNEVFKSIGEKQQSPFKNL
FT                   NILNNFFLKGKENTAREWQVAQLSLLELAGFQKNRTDNIKKGDISCFRNKLSAKANWNL
FT                   YLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSAYENRLHPNGTRKLAIGN
FT                   LIVPLDLAEFRRKMKGDFKRQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAVESTFYPPT
FT                   KKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAMLINISEEDAKDFTKKVRD
FT                   MCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHETQTCHVVDSFGSQTTGY
FT                   HILKASSVSQLILFANDELESDIKHYRVG"
FT   mat_peptide     <1..93
FT                   /product="P1"
FT   mat_peptide     94..1461
FT                   /product="helper component-proteinase, HC-Pro"
XX
SQ   Sequence 1461 BP; 459 A; 270 C; 339 G; 393 T; 0 other;
     ggcctattca tagtgcgtgg gtcgcacgaa ggaaaaatct atgatgcacg ttccaaggtt        60
     actcaagggg ttatggattc aatggttcag ttctcaagcg ctgaaagctt ttggaaggga       120
     ttggacggca attgggcaca aatgagatat cctactgatc atacatgtgt ggcaggctta       180
     ccagttgaag actgtggcag agtcgcagcg ataatgacac acagtatttt accgtgctat       240
     aagataacct gccctacctg tgcccaacaa tatgccaact tgccagccag tgacttactt       300
     aagatattac acaagcacgc aagtgatggt ttaaatcgat tgggggcaga caaagatcgc       360
     tttgtgcatg tcaaaaagtt cttgacaatc ttagagcact taactgaacc ggttgatctg       420
     agtctagaaa ttttcaatga agtattcaag tctatagggg agaagcaaca atcacctttc       480
     aaaaacctga atattctgaa taatttcttt ctaaaaggaa aggaaaatac agctcgtgaa       540
     tggcaggtgg ctcaattaag cttacttgaa ttggcaggat tccaaaagaa cagaacggat       600
     aatatcaaga aaggagacat ctcgtgcttt aggaataaac tatctgccaa agcaaattgg       660
     aacttgtatc tgtcatgtga taaccagctg gataagaatg caaacttcct gtggggacag       720
     agggaatatc atgctaagcg atttttctcg aactatttcg aggaaattga tccagcgaag       780
     ggctattcag catacgaaaa tcgtttgcat ccgaatggga caagaaaact tgcaattgga       840
     aacctaattg taccacttga tctggctgag tttaggcgga agatgaaagg tgattttaaa       900
     agacagccag gggtgagtaa gaagtgcacg agctcgaagg atggaaacta cgtgtatccc       960
     tgttgttgca ctacacttga tgatggctca gctgttgaat caacatttta cccgccaact      1020
     aagaagcacc tcgtaatagg taatagtggc gaccaaaagt atgttgactt accaaaaggg      1080
     aattctgaga tgttatatat tgccaggcaa ggcttctgtt acattaacat tttcctcgcg      1140
     atgttgatta acattagtga ggaagatgca aaggatttca ctaagaaggt tcgtgacatg      1200
     tgtgtgccaa agcttggaac ctggccaacc atgatggatc tggctacaac ttgtgctcaa      1260
     atgaaaatat tctaccctga tgttcatgat gcagaactgc ctagaatact agtcgatcac      1320
     gaaacgcaga catgccatgt ggttgactcg tttggctcac aaacaactgg gtatcatatt      1380
     ttgaaagcat ctagcgtgtc ccaacttatt ttgtttgcta atgatgagtt ggagtctgat      1440
     ataaaacatt atagagttgg t                                                1461
//