ID   AM236847; SV 1; linear; genomic RNA; STD; VRL; 1461 BP.
XX
AC   AM236847;
XX
DT   19-MAR-2008 (Rel. 95, Created)
DT   19-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Potato virus Y partial gene for polyprotein, P1 and helper
DE   component-proteinase, HC-Pro region, genomic RNA, isolate Zibo1
XX
KW   helper component-proteinase, HC-Pro; P1; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1461
RA   Li X.;
RT   ;
RL   Submitted (19-MAR-2006) to the INSDC.
RL   Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL   Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN   [2]
RA   Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT   "Sequence comparisons of Potato virus Y isolates from tobacco in China.";
RL   Unpublished.
XX
DR   MD5; 879921b1fa68588615f6dae6bfa17359.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1461
FT                   /organism="Potato virus Y"
FT                   /host="Nicotiana tabacum"
FT                   /lab_host="Nicotiana tabacum"
FT                   /isolate="Zibo1"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zibo"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1461
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B1GS01"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:B1GS01"
FT                   /protein_id="CAJ87174.1"
FT                   /translation="GLFIVRGSHEGKIYNARSKVTQGVLDSMVQFSNAESFWKGLDGNW
FT                   AQMRYPTDHTCVAGLPVEDCGRVAAIITHSILPCYKITCPTCAQQYANLPASDLLKVLH
FT                   RHASDGLSRLGADKDRFVHVSKFLTVLEHLTEPVDLNLEIFNEVFKSIGEKQQSPFKNL
FT                   NILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKGDISFFRNKLSAKANWNL
FT                   YLSCDNQLDKNANFLWGQREYHAKRFFSNFFEEIDPAKGYSAYETRLHPNGRRKLAIGN
FT                   LIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAVESTFYPPT
FT                   KKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAMLINISEEDAKDFTKKVRD
FT                   MCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHETQTCHVVDSFGSQTTGY
FT                   HILKASSVSQLILFANDELESDIKHYRVG"
FT   mat_peptide     <1..93
FT                   /product="P1"
FT   mat_peptide     94..1461
FT                   /product="helper component-proteinase, HC-Pro"
XX
SQ   Sequence 1461 BP; 459 A; 283 C; 337 G; 382 T; 0 other;
     ggcctattca tagtgcgtgg gtcgcacgaa ggaaaaatct ataatgcgcg ttccaaggtt        60
     acacaaggag ttctagactc aatggttcag ttctcaaacg ctgaaagctt ctggaaggga       120
     ttggacggca attgggcaca gatgagatac cctacagacc atacatgcgt agcaggctta       180
     ccagtcgaag actgtggcag agtagcagca ataataacac acagcattct accgtgctat       240
     aagataacct gccccacctg tgctcaacag tatgccaact tgccagccag tgatttgctc       300
     aaagtattac acaggcacgc aagcgatggt ttaagtcgat tgggagcgga taaagatcgc       360
     tttgtgcatg tcagcaagtt cttgacagtc ctagagcact tgactgaacc agttgatcta       420
     aatctagaaa tcttcaatga agtattcaag tctataggag agaagcaaca atcacctttc       480
     aaaaacctga atattctgaa taatttcttt ttgaaaggaa aggagaatac agctcgtgaa       540
     tggcaagtgg ctcaattaag cttacttgaa ttggcaagat tccaaaagaa caggacggat       600
     aatatcaaga aaggtgacat ctcgttcttc aggaataagc tatccgccaa agcaaattgg       660
     aacttgtatc tgtcatgcga caatcagttg gataagaacg caaacttcct gtggggacag       720
     agggaatatc atgccaagcg gtttttctcg aactttttcg aggaaattga tccagcgaag       780
     ggctactcag cgtacgaaac tcgtttgcat ccgaatggga gaagaaaact tgcaattgga       840
     aacctaattg ttccactcga tctggctgag tttaggcgga agatgaaagg tgattataaa       900
     agacagccag gggtgagtaa gaagtgcacg agctcgaagg atggaaacta cgtgtatccc       960
     tgttgttgta ctacactcga tgatggctca gctgttgaat caacatttta cccgccaact      1020
     aaaaagcatc ttgtaatagg taacagcggt gatcaaaagt acgttgatct accaaaaggg      1080
     aattctgaaa tgttatacat tgccaggcaa gggttttgtt atattaatat attccttgcg      1140
     atgttgatta acattagtga ggaagatgca aaggatttca caaagaaggt tcgtgacatg      1200
     tgtgtgccaa agcttggaac ctggccaacc atgatggatc tggctactac ttgtgctcaa      1260
     atgaaaatat tctaccctga tgttcatgat gcagagctgc ccagaatact agttgaccat      1320
     gaaactcaga catgccatgt ggtcgactcg tttggttcgc aaacaactgg ttatcatatt      1380
     ttaaaagcat ctagcgtgtc tcagctcatt ctgtttgcca atgatgaatt agaatctgat      1440
     ataaaacatt atagagttgg t                                                1461
//