ID   AM236030; SV 1; linear; genomic RNA; STD; VRL; 645 BP.
XX
AC   AM236030;
XX
DT   01-APR-2006 (Rel. 87, Created)
DT   24-MAR-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Cymbidium mosaic virus partial CP gene for coat protein, isolate FPo05,
DE   genomic RNA
XX
KW   coat protein; CP gene.
XX
OS   Cymbidium mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-645
RA   Grisoni M.;
RT   ;
RL   Submitted (10-MAR-2006) to the INSDC.
RL   Grisoni M., UMR 53-PVBMT, Cirad, Pole De Protection Des Plantes, 97410
RL   Saint Pierre, FRANCE.
XX
RN   [2]
RA   Moles M., Grisoni M.;
RT   "Evidences that Cymbidium mosaic virus (CymMV) strains segregate into two
RT   sub-groups based on diversity of coat protein and polymerase genes.";
RL   Unpublished.
XX
RN   [3]
RX   DOI; 10.1007/s00705-006-0897-6.
RX   PUBMED; 17216134.
RA   Moles M., Delatte H., Farreyrol K., Grisoni M.;
RT   "Evidence that Cymbidium mosaic virus (CymMV) isolates divide into two
RT   subgroups based on nucleotide diversity of coat protein and replicase
RT   genes";
RL   Arch. Virol. 152(4):705-715(2007).
XX
DR   MD5; cb3fa34313bfa04641dc92379b366ad3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..645
FT                   /organism="Cymbidium mosaic virus"
FT                   /host="Vanilla tahitensis"
FT                   /isolate="FPo05"
FT                   /mol_type="genomic RNA"
FT                   /country="French Polynesia:Raiatea"
FT                   /db_xref="taxon:12178"
FT   CDS             1..>645
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q1XE46"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q1XE46"
FT                   /protein_id="CAJ84637.1"
FT                   /translation="MGEPTPTPTATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLY"
XX
SQ   Sequence 645 BP; 126 A; 234 C; 152 G; 133 T; 0 other;
     atgggagagc ccactccaac tcccactgcc acttactccg ctgccgaccc cacttctgca        60
     cccaagttgg ccgacctggc tgccattaag tactcacctg tcacctcctc tatcgccacc       120
     cccgaagaaa tcaaagccat aacccaattg tgggttaaca accttggcct ccccgctgac       180
     accgtaggca ccgcggccat tgacctggcc cgagcctacg ctgacgtcgg ggcgtccaag       240
     agtgctacct tgctcggttt ctgccctaca aaacctgatg tccgtcgcgc cgctcttgcc       300
     gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta cgcaaaagtg       360
     gtgtggaatc tgatgctggc cactaacgat ccgcccgcca actgggccaa ggctggtttc       420
     caggaggata cccggtttgc cgcctttgac ttcttcgatg ccgtcgattc cactgccgcg       480
     ctggagcctg ctgaatggca gcgccgccct actgaccgtg aacgtgctgc gcactcgatc       540
     gggaagtacg gcgcccttgc ccgtcagcgt atccaaaacg gcaacctcat caccaacatt       600
     gccgaggtca ccaagggcca tcttggctcc accaacactc tctat                       645
//