ID   AM236024; SV 1; linear; genomic RNA; STD; VRL; 645 BP.
XX
AC   AM236024;
XX
DT   01-APR-2006 (Rel. 87, Created)
DT   24-MAR-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Cymbidium mosaic virus partial CP gene for coat protein, isolate MDG01,
DE   genomic RNA
XX
KW   coat protein; CP gene.
XX
OS   Cymbidium mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-645
RA   Grisoni M.;
RT   ;
RL   Submitted (10-MAR-2006) to the INSDC.
RL   Grisoni M., UMR 53-PVBMT, Cirad, 97410, 97410 Saint Pierre, REUNION.
XX
RN   [2]
RX   DOI; 10.1007/s00705-006-0897-6.
RX   PUBMED; 17216134.
RA   Moles M., Delatte H., Farreyrol K., Grisoni M.;
RT   "Evidence that Cymbidium mosaic virus (CymMV) isolates divide into two
RT   subgroups based on nucleotide diversity of coat protein and replicase
RT   genes";
RL   Arch. Virol. 152(4):705-715(2007).
XX
DR   MD5; a218c8aa67cdf0d2211dbc2f8868e8f7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..645
FT                   /organism="Cymbidium mosaic virus"
FT                   /host="Vanilla planifolia"
FT                   /isolate="MDG01"
FT                   /mol_type="genomic RNA"
FT                   /country="Madagascar:Vohemar"
FT                   /db_xref="taxon:12178"
FT   CDS             1..>645
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q1XE52"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q1XE52"
FT                   /protein_id="CAJ84631.1"
FT                   /translation="MGEPTPTPVATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLY"
XX
SQ   Sequence 645 BP; 126 A; 225 C; 152 G; 142 T; 0 other;
     atgggagagc ccactccaac tccagttgcc acttactccg ctgccgaccc cacttctgca        60
     cctaagttgg ccgacttggc tgccattaag tactcacctg tcacctcctc catcgccacc       120
     cccgaagaaa tcaaggccat aactcaattg tgggttaaca accttggcct acccgctgac       180
     actgtaggta ccgcggccat tgacctggcc cgcgcctacg ctgatgtcgg ggcgtccaag       240
     agcgctaccc tgctcggttt ctgccctacg aaacctgatg tccgtcgtgc cgctcttgcc       300
     gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta cgcaaaagtg       360
     gtgtggaatc tgatgctggc cactaatgat ccgcccgcca actgggccaa agctggtttc       420
     caggaggata cccgttttgc cgcctttgac ttcttcgatg ccgtcgattc cactgccgcg       480
     ctggagcctg ctgaatggca gcgccgccct actgaccgtg aacgtgctgc gcactcgatc       540
     gggaagtacg gtgcccttgc ccgtcagcgt atccaaaacg gcaatctcat caccaacatt       600
     gccgaggtca ccaaaggcca tcttggctcc accaacactc tctat                       645
//