ID   AM236022; SV 1; linear; genomic RNA; STD; VRL; 645 BP.
XX
AC   AM236022;
XX
DT   01-APR-2006 (Rel. 87, Created)
DT   24-MAR-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Cymbidium mosaic virus partial CP gene for coat protein, isolate RUN01,
DE   genomic RNA
XX
KW   coat protein; CP gene.
XX
OS   Cymbidium mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-645
RA   Grisoni M.;
RT   ;
RL   Submitted (10-MAR-2006) to the INSDC.
RL   Grisoni M., UMR 53-PVBMT, Cirad, 97410, 97410 Saint Pierre, REUNION.
XX
RN   [2]
RX   DOI; 10.1007/s00705-006-0897-6.
RX   PUBMED; 17216134.
RA   Moles M., Delatte H., Farreyrol K., Grisoni M.;
RT   "Evidence that Cymbidium mosaic virus (CymMV) isolates divide into two
RT   subgroups based on nucleotide diversity of coat protein and replicase
RT   genes";
RL   Arch. Virol. 152(4):705-715(2007).
XX
DR   MD5; 11a7528b4b37514fb50b107c3fd2e4b6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..645
FT                   /organism="Cymbidium mosaic virus"
FT                   /host="Vanilla planifolia"
FT                   /isolate="RUN01"
FT                   /mol_type="genomic RNA"
FT                   /country="Reunion"
FT                   /db_xref="taxon:12178"
FT   CDS             1..>645
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q1XE54"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q1XE54"
FT                   /protein_id="CAJ84629.1"
FT                   /translation="MGEPTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLY"
XX
SQ   Sequence 645 BP; 123 A; 236 C; 156 G; 130 T; 0 other;
     atgggagagc ccactccaac tccagctgcc acttactccg ctgccgaccc cacttctgca        60
     cccaagttgg ccgacctggc tgccattaag tactcgcctg tcacctcctc catcgccacc       120
     cccgaggaaa tcaaggccat aacccaattg tgggttaaca accttggcct ccccgctgac       180
     accgtaggta ccgcggccat tgacctggcc cgcgcctatg ctgacgtcgg agcgtccaag       240
     agtgctaccc tgctcggttt ctgccctacg aaacctgatg tccgccgcgc cgctcttgcc       300
     gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta cgcaaaagtg       360
     gtgtggaatc tgatgctggc cactaacgat ccgcccgcca actgggccaa ggctggtttc       420
     caggaggata cccggtttgc cgcctttgac ttcttcgatg ccgtcgattc cactgccgcg       480
     ctggagcctg ctgaatggca gcgccgccct actgaccgag aacgtgctgc gcactcgatc       540
     gggaagtacg gcgcccttgc ccgtcagcgt atccaaaacg gcaacctcat caccaacatt       600
     gccgaggtca ccaagggcca tcttggctcc accaacaccc tctat                       645
//