Dbfetch
ID AM230634; SV 1; circular; genomic DNA; STD; VRL; 2768 BP. XX AC AM230634; XX DT 30-JUN-2006 (Rel. 88, Created) DT 24-MAR-2007 (Rel. 91, Last updated, Version 2) XX DE Siegesbeckia yellow vein virus-[GD24] complete genome, isolate GD24 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW complete genome; precoat protein; replication enhancer protein; KW replication-associated protein; transcription activator protein. XX OS Siegesbeckia yellow vein virus-[GD24] OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; Siegesbeckia yellow vein virus. XX RN [1] RP 1-2768 RA Zhou X.P.; RT ; RL Submitted (24-JAN-2006) to the INSDC. RL Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268, RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RX DOI; 10.1007/s00705-006-0896-7. RX PUBMED; 17187292. RA Wu J.B., Zhou X.P.; RT "Siegesbeckia yellow vein virus is a distinct begomovirus associated with a RT satellite DNA molecule"; RL Arch. Virol. 152(4):791-796(2007). XX DR MD5; 19c4d94b09295841bd9d306eec34d827. XX CC Related entry AM230644 XX FH Key Location/Qualifiers FH FT source 1..2768 FT /organism="Siegesbeckia yellow vein virus-[GD24]" FT /host="Sigesbeckia glabrescens" FT /isolate="GD24" FT /mol_type="genomic DNA" FT /country="China:Guangdong province" FT /db_xref="taxon:371402" FT CDS 128..484 FT /transl_table=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:Q14RW2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q14RW2" FT /protein_id="CAJ76436.1" FT /translation="MKMWDPLINEFPETVHGFRCMLAIKYLQAVQLTYSPDTVGYDLIR FT ELIRILRTKDYGQATCRYSHFHSRLQGTSEVELRQPLSQQCCCPNCPCHQQKEDMGQSA FT HVQKAQNVQDVQKP" FT CDS 294..1067 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q14RW1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q14RW1" FT /protein_id="CAJ76437.1" FT /translation="MAKRPADIVISTPASKVRRRLNFDSPYRSSAAAPTVLVTNKRRTW FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSFEQRHDVVHVGKVICVSDVTRGNGLTH FT RVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDSRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQSTVTGGQYASKEQAIVRKFMKINNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1064..1468) FT /transl_table=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q14RW0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q14RW0" FT /protein_id="CAJ76438.1" FT /translation="MDSRTGELITAAQAKNGVYIWTVPNPLYFKITDHLSRPFNKEQDK FT ITVQIQFNYNLRTQLGIHKCFLIFEVWTRLQPQTWRFLRVFKKQVMQYLDNLGVISINN FT VIRAVDHVLYNKLQHTMYVQEFHDIKFNIY" FT CDS complement(1209..1619) FT /transl_table=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:Q14RV9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q14RV9" FT /protein_id="CAJ76439.1" FT /translation="MQPSSPSTSHSTPIPIKVQHKLAKRKKVTRRRRVDLDCGCTIYIG FT IHCANDGFTHRGTHHCSSGKEWRVYLDGAKSPIFQDNRSPQQAIQQRTRQDYRPDSIQL FT QPENSTGNSQMLSDFRSLDSLTASDMAFLESI" FT CDS complement(1522..2607) FT /transl_table=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q14RV8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q14RV8" FT /protein_id="CAJ76440.1" FT /translation="MHPPTKFRINAKNYFLTYPQCSLTKEEALSQLQTLETPTNILFIR FT ICRELHNDGNPHLHVLIQFEGKFQCKNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYM FT EKDGDILDSGDFQIDGRSARGGCQSANDAYAEAINSGSKVSALNILREKAPKDYVLQFH FT NLNRNLDRIFTPPIDIYVSPFISSSFNQVPEELEEWVSENIANAAARPWRPVSIVIQGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQQVW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTASYIEYLDEEKNSALKAWAIKNATFITLNEPL FT YSNTNQSPAQASQEEESDQET" FT CDS complement(2157..2450) FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q14RV7" FT /protein_id="CAJ76441.1" FT /translation="MGILTCMFSSSSKENSNAKIIDSSISHPQVGQHISIQTFRELKAR FT LMSKPTWRKTETSLILEISRSMDDQLEEVANLQTTRMPRQSTQGPKFRPSIY" XX SQ Sequence 2768 BP; 743 A; 530 C; 596 G; 899 T; 0 other; accggatggc cgccgatttt tttaaagtgg gcccccaaaa aaatgatcta gaccgttgct 60 caaagctaac taaaaaatat ccacgtatgc ttttgtatat ttaaatgtat ttccttttga 120 tttatatatg aaaatgtggg atcctttaat taacgaattc cctgagaccg ttcacggttt 180 tagatgtatg cttgcaataa aatatctgca agccgttcaa ttgacgtact cccctgatac 240 ggtaggatac gatttaattc gtgaacttat acgtatttta cgtactaagg attatggcca 300 agcgacctgc agatatagtc atttccactc ccgcctccaa ggtacgtcgg aggttgaact 360 tcgacagccc ctatcgcagc agtgctgctg ccccaactgt ccttgtcacc aacaaaagga 420 ggacatgggt caatcggccc atgtacagaa agcccagaat gtacaggatg tacaaaagcc 480 ctgatgttcc tcgtggttgt gaaggtccat gtaaggttca gtcgtttgaa cagcgtcacg 540 atgtagtcca tgtaggtaaa gtaatatgcg tgtctgatgt tacccgtggt aatgggttga 600 ctcaccgtgt gggtaagagg ttctgtatta aatctgtata cgttttgggt aaaatctgga 660 tggatgaaaa tattaagacc aagaatcaca ctaatacggt catgttctac ctagtccgtg 720 atagcagacc ctttggtact cctcaggatt ttggacaagt ttttaacatg tatgataatg 780 aacctagtac tgcaactgtg aagaatgaca acagagatcg atttcaagta cttagaagat 840 ttcagtctac cgttactggt ggccagtatg catctaagga gcaagccata gttaggaaat 900 ttatgaagat taacaaccac gttacttaca accatcagga agctgcgaag tacgataacc 960 atacagagaa cgccttgtta ttgtatatgg catgtactca tgccagtaac cctgtgtatg 1020 ctactttgaa aatcaggatc tatttttacg attctgttca gaattaataa atattgaatt 1080 ttatatcatg aaattcctgt acatacattg tgtgttgtag tttattatat aatacatgat 1140 ctactgctct aattacatta ttaatagaaa ttacacctaa attatctaaa tactgcatga 1200 cttgcttctt aaatactctc aagaaacgcc atgtctgagg ctgtaagcga gtccagactt 1260 cgaaaatcag aaagcatttg tgaattccca gttgagttct caggttgtag ttgaattgaa 1320 tctggacggt aatcttgtct tgttctttgt tgaatggcct gctgaggtga tctgttatct 1380 tgaaatatag gggatttggc accgtccaga tatacacgcc attctttgcc tgagctgcag 1440 tgatgagttc ccctgtgcgt gaatccatcg ttggcacagt gtattcctat gtatattgtg 1500 caaccacagt ctaggtcaac cctacgtctc ctggtcactt tcttcctctt ggctagcttg 1560 tgctggactt tgattggtat tggagtagag tggctcgttg agggtgatga aggttgcatt 1620 ttttattgcc caggctttta atgcactatt cttttcttca tcaagatatt ctatatagga 1680 ggcagttggt cctggattgc aaaggaagat tgttgggatt ccacctttaa tttgaattgg 1740 cttcccatac tttgtgttgc tttgccagac ttgttgggcc cccatgaatt ccttaaagtg 1800 ctttagatag tgcgggtcta cgtcatcaat gacgttgtac catgcatcat tgctgtagac 1860 ttttgggctc aagtcaagat gaccacacaa atagttgtgt ggtcccagtg atcttgccca 1920 cattgtcttc cctgtcctgc tatcaccctg tatgactata cttacaggtc tccatggccg 1980 cgcagcggca ttggctatgt tttcagagac ccattcttca agttcttctg gaacttgatt 2040 aaaagaagat gaaataaaag gagaaacata aatatctata ggaggtgtaa agatcctatc 2100 taaattccta tttaaattat gaaactgtaa aacataatct ttgggagctt tctcccttaa 2160 tatattgagg gccgaaactt tggaccctga gttgattgcc tcggcatacg cgtcgtttgc 2220 agattggcaa cctcctctag ctgatcgtcc atcgatctgg aaatctccag aatcaaggat 2280 gtctccgtct ttctccatgt aggttttgac atcagacgag cttttagctc cctgaatgtt 2340 tggatggaaa tgtgctgacc tacttgggga tgtgagatcg aagaatctat tatttttgca 2400 ttggaatttt ccttcgaact ggatgagaac atgcaggtga ggattcccat cgttgtgtag 2460 ttctctgcag attctgatga ataatatatt agttggggtt tctagggttt gtaattgtga 2520 aagtgcttct tcttttgtaa gtgagcactg tgggtatgtt agaaaataat tttttgcatt 2580 tattctgaat ttagtaggtg gatgcatgtt gacttggtca atcggtgtct ctcaatcttt 2640 gctatgcaat cggtgtctgg ggtcttattt atatgagaca ccaaatggca atattgtaat 2700 ttggtaaagt ggagcgtata actttaattc aaactccaga atggtaaagc ggccatccgt 2760 ctaatatt 2768 //