ID   AM183119; SV 1; linear; genomic RNA; STD; VRL; 2192 BP.
XX
AC   AM183119;
XX
DT   23-JAN-2006 (Rel. 86, Created)
DT   12-MAR-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Cucumber mosaic virus (strain Ri-8) genomic RNA segment RNA3, strain Ri-8,
DE   complete sequence
XX
KW   3a gene; 3b gene; coat protein; movement protein.
XX
OS   Cucumber mosaic virus (strain Ri-8)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2192
RA   Lopez C.;
RT   ;
RL   Submitted (20-JAN-2006) to the INSDC.
RL   Lopez C., COMAV, Universidad Politecnica de Valencia, Camino de Vera 14,
RL   46022 Valencia, SPAIN.
XX
RN   [2]
RA   Aramburu J., Galipienso L., Lopez C.;
RT   "Return of a cucumber mosaic virus isolate belonging to subgroup IB in the
RT   northeastern Spain and comparative fitness with isolates of other groups";
RL   Unpublished.
XX
DR   MD5; 5fe908b6da77f044c1e22344507ec473.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2192
FT                   /organism="Cucumber mosaic virus (strain Ri-8)"
FT                   /segment="RNA3"
FT                   /host="tomato"
FT                   /strain="Ri-8"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain:Barcelona"
FT                   /db_xref="taxon:367798"
FT   CDS             97..936
FT                   /gene="3a"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q2MCK5"
FT                   /protein_id="CAJ65583.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEDLNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1234..1890
FT                   /gene="3b"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q2MCK4"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q2MCK4"
FT                   /protein_id="CAJ65584.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2192 BP; 513 A; 516 C; 520 G; 643 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtcgagtc gtgctgtccg cacatatatt        60
     ttatctttct gtacagtgtg ttagatttcc cgaggcatgg ctttccaagg taccagtagg       120
     actttaactc aacagtcctc agcggctacg tctgacgatc ttcaaaagat attatttagc       180
     cctgaagcca ttaagaaaat ggctactgag tgtgacctag gccggcatca ttggatgcgc       240
     gctgataatg ctatttcagt ccggcccctc gttcccgaag taacccacgg tcgtattgct       300
     tccttcttta agtctggata tgatgttggt gaattatgct caaaaggata catgagtgtc       360
     cctcaagtgt tatgtgctgt tactcgaaca gtttccactg atgctgaagg gtctttgaga       420
     atttacttag ctgatctagg cgacaaggag ttatctccca tagatgggca atgcgtttcg       480
     ttacataacc atgatcttcc cgctttggtg tctttccaac cgacgtatga ttgtcctatg       540
     gaaacagttg ggaatcgtaa gcggtgtttt gctgtcgtta tcgaaagaca tggttacatt       600
     gggtataccg gtaccacagc tagcgtgtgt agtaattggc aagcaaggtt ttcatctaag       660
     aataacaact acactcatat cgcagctggg aagactctag tactgccttt caacagatta       720
     gctgagcaaa caaaaccgtc agctgttgct cgcctgttga agtcgcaatt gaacaacatt       780
     gaatcttcgc aatatttgtt aacgaacgcg aagattaatc aaaatgcgcg cagtgagtcc       840
     gaggatttaa atgttgagag ccctcccgcc gcaatcggga gttcttccgc gtcccgctcc       900
     gaagccttca gaccgcaggt ggttaacggt ctttagcact ttggtgcgta ttagtatata       960
     agtatttgtg agtctgtaca taatactata tctatagtgt cctgtgtgag ttgatacagt      1020
     agacatctgt gacgcgatgc cgtgttgaga aggggtcaca tctggtttta gtaagcctac      1080
     atcatagttt tgaggttcaa ttcctcttac tccctgttga gccccttact ttctcatgga      1140
     tgcttctccg cgagattgcg ttattgtcta ctgactatat agagagtgtt tgtgctgtgt      1200
     tttctctttt gtgtcgtaga attgagtcga gtcatggaca aatctgaatc aaccagtgct      1260
     ggtcgtaacc gtcgacgtcg tccgcgtcgt ggttcccgct ccgccccctc ctccgcggat      1320
     gctaacttta gagtcttgtc gcagcagctt tcgcgactta ataagacgtt agcagctggt      1380
     cgtccaacta ttaaccaccc aacctttgta gggagtgaac gctgtagacc tgggtacacg      1440
     ttcacatcta ttaccctaaa gccaccaaaa atagaccgtg ggtcttatta cggtaaaagg      1500
     ttgttattac ctgattcagt cacggaatat gataagaagc ttgtttcgcg cattcaaatt      1560
     cgagttaatc ctttgccgaa atttgattct accgtgtggg tgacagtccg taaagttcct      1620
     gcctcctcgg acttatccgt tgccgccatc tctgctatgt tcgcggacgg agcctcaccg      1680
     gtactggttt atcagtatgc cgcatctgga gtccaagcca acaacaaact gttgtatgat      1740
     ctttcggcga tgcgcgctga tataggtgac atgagaaagt acgccgtcct cgtgtattca      1800
     aaagacgatg cgctcgagac ggacgagcta gtacttcatg ttgacatcga gcaccaacgc      1860
     attcccacgt ctggagtgct cccagtctga tttcgtgttc ccagaatcct ccctccgatc      1920
     tctgtggcgg gagctgagtt ggcagttctg ctgtaaactg tctgaagtca ctaaacgttt      1980
     ctacggtgaa cgggttgtcc atccagctta cggctaaaat ggtcagtcgt ggagaaatcc      2040
     acgccagtag atttacaaat ctctgaggcg cctttgaaac catctcctag gtttcttcgg      2100
     aaagacttcg gtctgtgtac ttctagcaca acgtgctagt ttcagggtac gggtgccccc      2160
     ccactttcgt gggggcctcc aaaaggagac ca                                    2192
//