ID AM183118; SV 1; linear; genomic RNA; STD; VRL; 3049 BP. XX AC AM183118; XX DT 23-JAN-2006 (Rel. 86, Created) DT 12-MAR-2007 (Rel. 91, Last updated, Version 2) XX DE Cucumber mosaic virus (strain Ri-8) genomic RNA segment RNA2, strain Ri-8, DE complete sequence XX KW 2a gene; 2b gene; 2b protein; RNA-dependent RNA polymerase. XX OS Cucumber mosaic virus (strain Ri-8) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3049 RA Lopez C.; RT ; RL Submitted (20-JAN-2006) to the INSDC. RL Lopez C., COMAV, Universidad Politecnica de Valencia, Camino de Vera 14, RL 46022 Valencia, SPAIN. XX RN [2] RA Aramburu J., Galipienso L., Lopez C.; RT "Return of a cucumber mosaic virus isolate belonging to subgroup IB in the RT northeastern Spain and comparative fitness with isolates of other groups"; RL Unpublished. XX DR MD5; 7440ce7413c0b590633fcb4baf9b59fa. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3049 FT /organism="Cucumber mosaic virus (strain Ri-8)" FT /segment="RNA2" FT /host="tomato" FT /strain="Ri-8" FT /mol_type="genomic RNA" FT /country="Spain:Barcelona" FT /db_xref="taxon:367798" FT CDS 87..2660 FT /gene="2a" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q2MCK7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q2MCK7" FT /protein_id="CAJ65581.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEEC FT EAGDAQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT LVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKYCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSQLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKQRKKYGIERRCNDKRRTPTGSYGGGEEAETKVSQTESTG FT TRSQKSQRESAFKSQIIPLPTVLSSGWFGTDRVVPPCERGGVTRV" FT CDS 2419..2751 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q2MCK6" FT /protein_id="CAJ65582.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSCRHVNVAELPESEASRLELSAEDHDFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3049 BP; 771 A; 679 C; 707 G; 892 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagactta 60 aaacttttct ttctagtatc ttttctatgg ctttccctgc ccctgcattc tcactggcca 120 atcttttgaa cggcagttac ggtgtcgaca ctcccgagga tgtggaacgt ttgcgatctg 180 agcaacgtga agaggctgct gcggcctgtc gtaattacag gcccctaccc gctgtggatg 240 tcagcgagag tgtcacagag gacgcgcatt ccctccgaac tcctgacgga gctcccgctg 300 aagcggtgtc tgatgagttt gtaacttatg gtgctgaaga ttaccttgaa aaatctgatg 360 atgagctcct tgtcgctttt gagacgatgg tcaaacccat gcgtatcgga caactatggt 420 gccctgcgtt taataaatgt tcttttattt ccagcattgc tatggccaga gctttgttgt 480 tggcacctag aacatcccac cgaaccatga agtgttttga agacctggtc gcggctattt 540 acactaaatc tgatttctac tacagtgaag agtgtgaagc cggcgacgct cagatagata 600 tctcgtctcg cgatgtaccc ggttattctt tcgaaccgtg gtcccgaacg tctggatttg 660 aaccgccgcc catctgtgaa gcgtgcgaca tgatcatgta ccagtgcccg tgttttgatt 720 ttaatgcttt aaagaaatcg tgcgctgaga ggactttcgc tgatgattat gttattgaag 780 gtttagatgg tgttgttgat aatgcgactc tgttgtcgaa tttgggtcca tttttggtac 840 ccgtgaagtg tcaatatgaa aaatgtccaa cgccaaccat cgcgattcct ccggatttaa 900 accgtgctac tgatcgtgtt gatatcaatt tagttcaatc catttgtgac tcgactctgc 960 ccactcatag taattacgac gactcttttc atcaagtgtt cgtcgaaagt gcagactatt 1020 ctatagatct ggatcatgtt agacttcgac agtctgatct tattgcaaaa attccagatt 1080 cagggcatat gataccggtt ctgaataccg ggagcggtca caagagagta ggtacaacga 1140 aggaggtcct tacagcaatt aagaaacgta atgctgacgt tccagagcta ggtgattccg 1200 ttaatctgtc tagattgagt aaagctgtgg ctgagagatt cttcatttca tacatcaatg 1260 gtaactctct agcatccagt aaccttgtta atgtcgttag taacttccac gattacatgg 1320 aaaagtggaa gtcctcaggt ctttcttatg atgatcttcc ggatcttcat gctgagaatt 1380 tgcagtttta tgaccacatg ataaaatccg atgtgaaacc tgtggtgagc gacacactca 1440 atatcgacag accggttcca gctactataa cgtatcataa gaaaagtata acctcccagt 1500 tctcaccgtt attcacagcg ctattcgagc gcttccagag atgccttcga gaacgtatta 1560 ttcttcctgt tggtaagatt tcatcccttg agatggcagg atttgatgtc aagaacaaat 1620 actgcctcga gattgatctg tctaagtttg ataagtctca aggtgaattt catttgctaa 1680 tccaggaaca cattttgaat ggtctaggat gtccagctcc gataactaag tggtggtgtg 1740 atttccatcg attctcttac attagagacc gtagagctgg tgttggtatg cctattagtt 1800 tccagagacg aactggtgat gcattcactt attttggcaa taccatcgtc accatggctg 1860 agtttgcctg gtgttatgac accgaccaat tcgaaaagct tttattctca ggcgatgatt 1920 ctctaggatt ttcacagctt ccccctgttg gtgacccgag taaattcaca actcttttca 1980 acatggaagc taaggtgatg gaacctgccg taccatatat ttgttcgaag ttcttactct 2040 ctgacgagtt cggtaacaca ttttccgttc cagatccatt gcgcgaggtt cagcggttag 2100 gaacaaagaa aattccctat tctgacaatg atgaattctt gtttgctcac ttcatgagct 2160 ttgttgatcg attgaagttt ttggaccgaa tgtctcagtc ttgtatcgat caactttcga 2220 ttttcttcga attgaaatac aagaagtctg gggaagaggc tgctttaatg ttaggcgcct 2280 ttaagaagta taccgctaat ttccagtcct acaaagaact ctattattca gatcgtcgtc 2340 agtgcgaatt gatcaattcg ttttgtagta cagagttcag ggttgagcgt gtaaattcca 2400 acaaacagcg aaagaaatat ggaattgaac gtaggtgcaa tgacaaacgt cgaactccaa 2460 ctggctcgta tggtggaggc gaagaagcag agacgaaggt ctcacaaaca gaatcgacgg 2520 gaacgaggtc acaaaagtcc cagcgagaga gcgcgttcaa atctcagatt attccgcttc 2580 ctaccgttct atcaagtgga tggttcggaa ctgacagggt cgtgccgcca tgtgaacgtg 2640 gcggagttac ccgagtctga ggcctctcgt ttagagttat cggcggaaga ccatgatttt 2700 gacgatacag attggttcgc cggtaacgaa tgggcggaag gtgctttctg aaacctcccc 2760 ttccgcatct ccctccggtt tctgtggcgg gagctgagtt ggcagtgttg ctataaactg 2820 tctgaagtca ctaaacacac tgtggtgaac gggttgtcca tccagcttac ggctaaaatg 2880 gtcagtcgta gagaaatcta cgccagcaga cttacaagtc tctgaggcac ctttgaaacc 2940 atctcctagg tttcttcgga aggacttcgg tccgtgtact tctagcacaa cgtgctagtt 3000 tcagggtacg ggtgcccccc acttttgtgg ggcctccaaa aggagacca 3049 //