ID   AM183116; SV 1; linear; genomic RNA; STD; VRL; 2217 BP.
XX
AC   AM183116;
XX
DT   23-JAN-2006 (Rel. 86, Created)
DT   12-MAR-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Cucumber mosaic virus (strain Pl-1) genomic RNA segment RNA3, strain Pl-1,
DE   complete sequence
XX
KW   3a gene; 3b gene; coat protein; movement protein.
XX
OS   Cucumber mosaic virus (strain Pl-1)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2217
RA   Lopez C.;
RT   ;
RL   Submitted (20-JAN-2006) to the INSDC.
RL   Lopez C., COMAV, Universidad Politecnica de Valencia, Camino de Vera 14,
RL   46022 Valencia, SPAIN.
XX
RN   [2]
RX   DOI; 10.1007/s00705-006-0875-z.
RX   PUBMED; 17122894.
RA   Lopez C., Aramburu J., Galipienso L., Nuez F.;
RT   "Characterisation of several heterogeneous species of defective RNAs
RT   derived from RNA 3 of cucumber mosaic virus";
RL   Arch. Virol. 152(3):621-627(2007).
XX
DR   MD5; c41756a6e97f58c3868be82a85648b38.
DR   EuropePMC; PMC3550734; 23637513.
DR   EuropePMC; PMC3550809; 23730005.
DR   EuropePMC; PMC4188193; 25674612.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2217
FT                   /organism="Cucumber mosaic virus (strain Pl-1)"
FT                   /segment="RNA3"
FT                   /host="tomato"
FT                   /strain="Pl-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain:Barcelona"
FT                   /db_xref="taxon:367797"
FT   CDS             122..973
FT                   /gene="3a"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q2MCL0"
FT                   /protein_id="CAJ65578.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDAGELSSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVTLHNHDLPALVSFQPTYDCPMEIVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNSIESSQYVLTNAKINQNARSESEELNVESPPIAIGSSSASRSETFRPQVVNGTLV
FT                   FS"
FT   CDS             1261..1917
FT                   /gene="3b"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q2MCK9"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q2MCK9"
FT                   /protein_id="CAJ65579.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLHDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRILTSGVLPV"
XX
SQ   Sequence 2217 BP; 509 A; 516 C; 536 G; 656 T; 0 other;
     gtaatcttac cactgtgtgt gtgtgtgtgt gcgtgtgtcg cgtcgtgtcg agtcgtgttg        60
     tccgcacatt tgagtcgtgc tgtccgcaca ttttcttttc agtgtgttag attcccgagg       120
     tatggctttc caaggtacca gtaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgaacttcaa aagatattat ttagccctga agccattaag aagatggcta ctgagtgtga       240
     cctaggccgg catcattgga tgcgcgctga taatgctatt tcagtccggc ccctcgttcc       300
     cgaagtaacc catggtcgta ttgcttcttt ctttaagtct ggatatgatg ctggtgaatt       360
     aagctctaaa ggatatatga gcgttcctca agtgttgtgt gctgttactc gaacagtttc       420
     caccgacgct gagggatctt tgagaattta cctagctgat ttaggcgaca aggagttatc       480
     tcctatagat ggacagtgcg tcacattaca taaccatgat ctacccgctt tagtgtcttt       540
     ccaaccgaca tatgattgtc ctatggaaat tgttgggaat cgtaagcggt gttttgctgt       600
     tgttatcgaa agacatggtt atattgggta taccggcacc acagctagcg tgtgtagtaa       660
     ttggcaagca cggttttctt ctaagaataa caactacact cacatcgcag ctgggaagac       720
     tctagtactg ccgtttaaca gattagctga gcaaacgaaa ccgtcagccg tcgctcgcct       780
     gttgaagtcg caattgaaca gcatagaatc ttcgcaatac gttttaacga atgcgaagat       840
     caatcagaat gcgcgcagtg agtccgagga attaaatgtt gagagccctc ccatcgcaat       900
     cgggagttct tccgcgtccc gctccgaaac cttcagaccg caggtggtta acggtacttt       960
     agtgttttcg tagcgtttta gtatataagt atatgtgagt ctgtacataa tactatatct      1020
     atagtgtcct gtgtgagttg atacagtaga catctgtgac gcgatgttgt gttgagaaga      1080
     gagcacatct ggttttagta aacccacaac atatctttga ggttcaattc ctctcgttcc      1140
     ctgttgggcc cctttacttt ttcatggatg cttctccacg agattgcgtt tcgtctactt      1200
     atcctaagag tattgtgctg tgttttctct ttgtgtagta gaatcaagtc gagtcgagtc      1260
     atggacaaat ctgaatcaac cagtgctggt cgtaatcgtc gacgtcgtcc gcgtcgtggt      1320
     tcccgctccg ctccctcctc cgcggatgct aactttagag tcttgtcgca gcagctttcg      1380
     cgacttaaca agacgttagc agctggtcgt ccaactatta accacccaac ctttgtgggt      1440
     agtgaacgct gtaaacctgg gtacacgttc acatctatta ccctgaagcc gccgaaaata      1500
     gaccgcgggt cttattatgg taaaaggttg ttgctacctg attcagtcac ggagttcgat      1560
     aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctacc      1620
     gtgtgggtga cagtccgtaa agttcctgct tcctcggact tatccgttgc cgctatctct      1680
     gctatgtttg cggacggagc ctcaccggta ctggtttatc agtatgctgc atccggcgtt      1740
     caagccaaca acaaattgtt gcacgatctt tcggcgatgc gcgctgatat tggcgacatg      1800
     agaaagtacg ccgtcctcgt gtattcaaaa gacgatgcgc tcgagacgga cgagttggta      1860
     cttcatgttg acatcgagca ccaacgcatt cttacatctg gggtgctccc agtttgaatc      1920
     cgtgttttcc cagaatcctc cctccggtct tgtggcggga gctgagttgg tagtgttact      1980
     ataaactgcc tgaagtcact aaacgctttg cggtgaacgg gttgtccatc cagcttacgg      2040
     ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc tgaggtgcct      2100
     ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc tagcacaagg      2160
     tgctagtttt agggtacggg catcccccac ttcagtgggg tctctcgaag gagacca         2217
//