ID AM183115; SV 1; linear; genomic RNA; STD; VRL; 3043 BP. XX AC AM183115; XX DT 23-JAN-2006 (Rel. 86, Created) DT 12-MAR-2007 (Rel. 91, Last updated, Version 2) XX DE Cucumber mosaic virus (strain Pl-1) genomic RNA segment RNA2, strain Pl-1, DE complete sequence XX KW 2a gene; 2b gene; 2b protein; RNA-dependent RNA polymerase. XX OS Cucumber mosaic virus (strain Pl-1) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3043 RA Lopez C.; RT ; RL Submitted (20-JAN-2006) to the INSDC. RL Lopez C., COMAV, Universidad Politecnica de Valencia, Camino de Vera 14, RL 46022 Valencia, SPAIN. XX RN [2] RX DOI; 10.1007/s00705-006-0875-z. RX PUBMED; 17122894. RA Lopez C., Aramburu J., Galipienso L., Nuez F.; RT "Characterisation of several heterogeneous species of defective RNAs RT derived from RNA 3 of cucumber mosaic virus"; RL Arch. Virol. 152(3):621-627(2007). XX DR MD5; 42b778d866bd57f6e5b9b3f6a84c31ed. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3043 FT /organism="Cucumber mosaic virus (strain Pl-1)" FT /segment="RNA2" FT /host="tomato" FT /strain="Pl-1" FT /mol_type="genomic RNA" FT /country="Spain:Barcelona" FT /db_xref="taxon:367797" FT CDS 79..2652 FT /gene="2a" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q2MCL2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q2MCL2" FT /protein_id="CAJ65576.1" FT /translation="MAFSAPTFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPSEEVSVEFVTYGAEDYLEKSDDELSVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKGFEDLVAAIYTKSDFYYDEEC FT EADDIQIDVSSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVAIPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLS FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELRIERSSSTKQRKKKDGIERRRSDKRRTPTGSYGGGEKTETKVSHEEST FT GTRSQKSQREGAFKSQIVPLPTILSGGWSGTDRAPPCEHGGIIRI" FT CDS 2414..2746 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q2MCL1" FT /protein_id="CAJ65577.1" FT /translation="MELNEGAVTNVELQLARMVEVKRQRRRSHMKNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGPELIELHHVNMVELSESEAPRLSLLVEEDHDFDDTDWFAGNE FT WAEGSF" XX SQ Sequence 3043 BP; 755 A; 656 C; 722 G; 910 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagatttt 60 ctagtttctt tctttcctat ggctttctcc gcccccactt tctcactagc caatcttttg 120 aacggtagtt acggtgtcga cactcccgag gaagtggaac gcgtgcgatc tgagcaacgc 180 gaagaggctg ctgcggcctg tcgtaattac aggcctttac ccgctgtgga tgtcagcgag 240 agtgtcacag aggatgcgca ttccctccga actccagatg gagctccctc tgaagaggta 300 tctgttgagt ttgttactta tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 tctgtcgctt ttgagacgat ggttaaaccc atgcgtattg gacaactatg gtgccctgca 420 tttaataagt gttcttttat ttccagcatt gctatggcca gagctttgtt gttggcacct 480 agaacatccc accgaaccat gaaaggtttt gaagacctgg tcgcggctat ttacactaaa 540 tctgatttct attacgatga ggagtgtgaa gccgacgaca ttcagataga tgtctcgtct 600 cgcgatgtac ccggttattc tttcgaaccg tggtcccgaa cgtctggatt tgaaccgccg 660 cctatctgtg aggcgtgtga catgatcatg taccagtgcc cgtgttttga ttttaatgct 720 ttaaagaaat cgtgcgctga gaggactttc gctgatgact atgttatcga aggtttagat 780 ggtgttgttg acaatgcgac tttattgtcg aatctgggcc cgtttttggt gcctgtgaaa 840 tgtcaatatg agaaatgtcc aacacctact gttgcgattc ctccgagttt aaatcgtgct 900 actgatcgtg ttgatatcaa tttagttcaa tccatttgtg actcgactct gcccacacat 960 agtaactacg acgactcttt ccatcaagtg tttgtcgaga gtgcagacta ttctattgat 1020 ctggatcatg ttaggcttcg gcaatctgat cttattgcga agatcccaga ttcagggcat 1080 atgataccgg ttctgagtac cgggagtggt cacaagagag taggtacgac gaaggaggtc 1140 cttacagcaa tcaagaaacg taatgctgac gttccagagc tgggtgattc cgttaatttg 1200 tccaggttga gtaaggctgt ggctgagaga ttctttattt catacatcaa tggtaactct 1260 ttagcatcca gcaattttgt taatgtcgtt agtaacttcc acgattacat ggaaaaatgg 1320 aagtcctcag gtctctcata tgatgatctt ccagatcttc acgctgagaa tttgcaattt 1380 tatgatcata tgataaaatc tgatgtgaaa cctgtggtaa gcgacacact caacattgac 1440 agaccggttc cagctactat aacgtatcat aagaaaggta taacctccca gttctcaccg 1500 ttgtttactg cgctatttga gcgtttccag agatgccttc gagaacgcat tattcttcct 1560 gtaggaaaga tttcatccct tgagatggca ggttttgatg ttaagaacaa acattgtctc 1620 gagatcgatc tgtccaaatt cgacaaatct caaggtgaat tccatttgat gattcaggaa 1680 catattttga atggtctagg gtgcccagct ccgataacta agtggtggtg cgatttccac 1740 agattctctt acattagaga ccgtagagct ggtgttggta tgcctattag tttccaaaga 1800 cgaactggtg atgcattcac ttattttggt aataccattg tcaccatggc tgaatttgcc 1860 tggtgctacg acaccgacca attcgaaaag cttttattct cgggcgatga ttctctagga 1920 ttttcagtgc ttccccctgt tggtgatccg agtaaattca caactctttt caacatggaa 1980 gcgaaggtga tggaacctgc agtaccttat atttgttcga agttcttact ctctgacgag 2040 ttcggtaaca ccttttccgt tccagatcca ttgcgcgagg ttcagcggtt aggaactaag 2100 aaaattccct attcagacaa tgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgtatcg atcagctttc actcttcttt 2220 gagttgaaat ataggaagtc tggggctgag gctgctttaa tgttaggcgc ctttaagaag 2280 tataccgcta attttcaatc ctataaggaa ctctactatt cagatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg cgtagagttg aggattgagc gttcgagttc cactaagcag 2400 cgaaagaaga aagatggaat tgaacgaagg cgcagtgaca aacgtcgaac tccaactggc 2460 tcgtatggtg gaggtgaaaa gacagagacg aaggtctcac atgaagaatc gacgggaacg 2520 aggtcacaaa agtcccagcg agagggcgcg ttcaaatctc agattgttcc gcttcctacc 2580 attttatcag gtggatggtc cggaactgat agagctccac catgtgaaca tggtggaatt 2640 atccgaatct gaggcccctc gtttatcgtt actggtggaa gaagaccatg attttgacga 2700 tacggattgg ttcgctggta acgagtgggc ggaagggtcg ttttgaaaac ccccctttcc 2760 tttctccctc cggttttctg aggcgggagc tgagttggca gtattgctat aaactgtctg 2820 aagtcactaa acgttttacg gtgaacgggt tgtccatcca gctaacggct aaaatggtca 2880 gtcgtggaga aatccacgcc ggaggcttac aagtctctga gacacctttg aaaccgtctc 2940 ctgggtttct tcggaaggac ttcggtccgt gtacctctaa cacaatgtgc tagttttagg 3000 gtacgggtgt cccccgcttt gcggggtctc ttaaaggaga cca 3043 //