ID AM158955; SV 1; circular; genomic DNA; STD; VRL; 2717 BP. XX AC AM158955; XX DT 21-NOV-2005 (Rel. 85, Created) DT 23-JUL-2008 (Rel. 96, Last updated, Version 2) XX DE Indian cassava mosaic virus-[Ker5] DNA B, isolate Koodathai XX KW BC1 gene; BV1 gene; movement protein; nuclear shuttle protein. XX OS Indian cassava mosaic virus-[Ker5] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2717 RA Patil B.L.; RT ; RL Submitted (18-NOV-2005) to the INSDC. RL Patil B.L., Plant Molecular Biology, University of Delhi South campus, RL Dept. of Plant Molecular Biology, University of Delhi, New Delhi-21, RL 110021, INDIA. XX RN [2] RX DOI; 10.1007/s00705-005-0624-8. RX PUBMED; 16132175. RA Rothenstein D., Haible D., Dasgupta I., Dutt N., Patil B.L., Jeske H.; RT "Biodiversity and recombination of cassava-infecting begomoviruses from RT southern India"; RL Arch. Virol. 151(1):55-69(2006). XX DR MD5; 2efeeee4f66a991e8461bec6723fcba9. XX CC Similar to entry: AJ575820. XX FH Key Location/Qualifiers FH FT source 1..2717 FT /organism="Indian cassava mosaic virus-[Ker5]" FT /host="Manihot esculanta Crantz" FT /isolate="Koodathai" FT /mol_type="genomic DNA" FT /country="India:Kerala" FT /db_xref="taxon:358182" FT CDS 341..1123 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:Q2YHN5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q2YHN5" FT /protein_id="CAJ43623.1" FT /translation="MRRGAYTPRSTPFPRDRRSYNAGKGRSFRSYRRRGPVRPLARRNL FT FGDDHARAFTYKTLSEDQFGPDFTIHNNNYKSSYISCLPNTRALSDNRVGDYIKLVNIS FT FTGTVCIKNSQMESDGSPMLGLHGLFTCVLVRDKTPRIYSATEPLIPFPQLFGSINASY FT ADLSIQDPYKDRFTVIRQVSYPVNTEKGDHMCRFKGTRRFVGRYPIWTSFKDDGGSGDS FT SGLYSNTYKNAILVYYVWLSDVSSQLEMYCKYVTRYIG" FT CDS complement(1132..1992) FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:Q2YHN4" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q2YHN4" FT /protein_id="CAJ43624.1" FT /translation="MENNSSNAAYLRSEGVEYELTNDSTDVKLSFPSLLDNKISLLKGH FT CCKIDHIVLEYRNQVPVNATGHVIIEIHDQRLHDGDSKQAEFTIPVQCNCNLHYYSSSF FT FSMKDINPWRVMYRVVDTNVINGVHFCRIQGKLKLSTAKQSNDIQFRSPKIEILSKAFT FT ERDIDFWSVGRKAQQRKLVQGPSLIGSRSMRYAPCSIGPNESWAVRSAVGLNEPWAVKS FT EAGPSIERPYSQLNRLNPDALDPGKSVSQVGSDHFTREDLNDIISKTVNMCLNTSMQSH FT VSKNV" XX SQ Sequence 2717 BP; 711 A; 544 C; 624 G; 838 T; 0 other; accggatggc cgcgcccccc tctttatggt ggcccccccc acgttgggat gtccccctct 60 cacaacgctc actaggaggt tcaatatgtt ggtggcccca cgatgttgtt tataacgtct 120 ataacgtttg agactcgaag catgtgatgc cacgtatgcg ttatttgtac ttcgtctcga 180 agttatgagt gagggcccta tgtgtggata tctaaccgca tattgtgcga atggattaaa 240 cgtggcaaga tcatgccgtt tattgggaac tatattatta tgctgttgtc tatatatatg 300 ggtatgtctt gtttcggaga tctgcacatg gtggttcagg atgagaagag gtgcctatac 360 cccccgttct actccattcc ctcgtgaccg gagatcgtat aatgccggta agggtagatc 420 atttcgttcg taccgtcgtc gtggacctgt tcgtccatta gctcgtcgga atctgtttgg 480 tgatgaccat gcacgtgcat tcacgtataa gaccttatcg gaggatcaat ttggaccgga 540 ctttaccata cataataata attataagtc atcgtatata tcatgcctgc caaacacacg 600 tgcccttagc gataacaggg taggtgatta tatcaaactt gtaaatatat catttacagg 660 tacagtgtgt ataaagaaca gccagatgga gtctgacgga agcccaatgt tgggcctgca 720 tgggctgttt acttgtgtat tggtccggga taagacccct cgtatatatt ctgccactga 780 gcctttgata cctttcccac agttgtttgg gtccataaac gcgagctatg cggatttgtc 840 tatacaagac ccatataagg atcggttcac agttatccgt caggtgtctt acccagttaa 900 tacggagaag ggtgatcata tgtgtcgttt caaaggcact cgtcgttttg ttggtagata 960 ccctatctgg actagtttta aagatgatgg tggcagtgga gattcatcgg gattatatag 1020 taatacgtat aaaaatgcca tacttgtata ttatgtatgg ctcagcgacg tatcgtcaca 1080 attggaaatg tattgtaaat atgtaactcg atatattggt taataaaaat gttatacatt 1140 tttggataca tggctctgca tactcgtatt taaacacata tttactgtct tgctgatgat 1200 gtcgtttaag tcctctcgtg tgaagtggtc cgatcctact tgtgatactg actttcctgg 1260 gtccaatgcg tctggattga gccggtttag ttggctgtaa ggcctttcaa ttgatggccc 1320 agcctcgctc ttaacggccc atggctcgtt aagtccaacc gcgcttctaa cggcccatga 1380 ttcatttggg cctattgaac atggagcata tctcatggat ctggatccta ttagacttgg 1440 gccttggacc agtttcctct gctgggcttt ccgacccact gaccagaaat caatgtccct 1500 ctcagtgaag gccttgctca gtatctcgat tttgggagag cggaactgta tgtcattaga 1560 ctgctttgca gttgacagct tgagttttcc ctgtatacgg cagaagtgga ccccgttgat 1620 gacgtttgtg tctacgaccc tgtacataac cctccatggg tttatgtcct tcatggagaa 1680 gaacgatgaa gaatagtagt gaaggttgca gttgcattgg acgggaatag taaattcagc 1740 ctgttttgag tctccgtcat gcagtctttg gtcgtgaatt tcaatgatga catgccctgt 1800 ggcgttaacg ggtacctggt ttctatactc taggacgatg tggtctattt tgcagcagtg 1860 acccttgagg agcgatattt tgttatccag aagagatgga aagctcaact tgacgtctgt 1920 tgagtcattg gttaactcat attcaactcc ttcggaacga agatacgctg cattgctact 1980 attattctcc attggccccg caggggaaat gcttaaaaat taagcccagt gcagaagaaa 2040 taatttaatg tgcataaagc aaagcccaaa gcgtaataaa tagctaaagg catatatatt 2100 atattattga tgaaaggtga caagagcatc cacgtggcag tggattaaat acatgaaaag 2160 ctatacaata tatttaaaaa aagctgtgac gacgtcatct tcaacgaatg gaatccggaa 2220 accctaatcc atctactgag gactctggtt aagccctcta gtagtatgtc acatgtttcc 2280 ggtgtcatgt ggtagtaatt tttgagtttg taaccccaat cttccatttt gaaggccata 2340 tgtatggctc tatctatttc tgttaacaga tccatatctt gttcttcgaa atgaaggtaa 2400 tatgaatttg aaccagtcgc gatgtaagat tgatgtctgc tagtagtttt gaattcgacc 2460 cagatcgaat tcttcgtaat gcgactggat agtcgcacac atttcttgct gtgttgcaag 2520 aaggaatagt tagtttggga agacatagga agaatgagaa tgatgttggg tttaagtggg 2580 atttctctct ccgcaatcgg tactcagata gtttagcccc catattaggt actcaatata 2640 tacatgagta ccaaatggca tagatgtaaa taatgggaat ataatttgaa ttcaaaagcg 2700 gccatccgta taatatt 2717 //