ID AM157413; SV 1; circular; genomic DNA; STD; VRL; 2762 BP. XX AC AM157413; XX DT 12-OCT-2006 (Rel. 89, Created) DT 12-OCT-2006 (Rel. 89, Last updated, Version 1) XX DE Dolichos yellow mosaic virus DNA-A segment, complete sequence, isolate DE Bangalore-2 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW complete segment; CP gene; REn gene; Rep gene; KW replication enhancer protein; replication-associated protein; KW transcriptional activator protein; TrAp gene. XX OS Dolichos yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2762 RA Maruthi M.N.; RT ; RL Submitted (08-NOV-2005) to the INSDC. RL Maruthi M.N., Natural Resources Institute, University of Greenwich, Central RL Avenue, Chatham Maritime, Kent, ME4 4TB, UNITED KINGDOM. XX RN [2] RX DOI; 10.1111/j.1744-7348.2006.00075.x. RX AGRICOLA; IND43840784. RA Maruthi M.N., Manjunatha B., Rekha A.R., Govindappa M.R., Colvin J., RA Muniyappa V.; RT "Dolichos yellow mosaic virus belongs to a distinct lineage of Old World RT begomoviruses; its biological and molecular properties"; RL Ann. Appl. Biol. 149(2):187-195(2006). XX DR MD5; 7400cda3a11b25872ec12f6d2ee71a50. XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="Dolichos yellow mosaic virus" FT /segment="DNA-A" FT /host="Dolichos" FT /isolate="Bangalore-2" FT /mol_type="genomic DNA" FT /country="India:Karnataka state, Bangalore" FT /db_xref="taxon:333968" FT CDS 123..410 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q25AU4" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:Q25AU4" FT /protein_id="CAJ43221.1" FT /translation="MWDPLVNDFPDTLHGLRCMLAVKFVQELLETYPRDSNGRILLEEL FT ISVLRCKRYAKAQFRYGVFYSKTQCTSKAQLRQPICNTDVSSSNSEHQSS" FT CDS 283..1056 FT /gene="AV1" FT /gene_synonym="CP" FT /product="coat protein" FT /db_xref="GOA:Q05H77" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q05H77" FT /protein_id="CAJ43222.1" FT /translation="MPKRSFDMAFSTPRPSVRRRLNFDNPSATPMSVRRTPSTSRRRQW FT TNRPMNRKPRLYRMYRSRDVPYGCEGPCKVQSFEQRHDISHTGKVMCVSDVTRGNNLTH FT RVGKRFCVKSVYIIGKIWMDENIKTKNHTNTVMFWLVRDRRPFGTPMDLGQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFDSTVTGGQYASREANVIKRFWRVNNYVVHNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIXIYFYDSISN" FT CDS complement(1073..1483) FT /gene="REn" FT /gene_synonym="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q05H76" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q05H76" FT /protein_id="CAJ43223.1" FT /translation="MTDSRTGESITAAQLQSGVFIWELKNPLSFKILEHHEGFLFDPNQ FT HRTKIRIMFNHGLKKALGIHKAFLDLVVYHRLTPQSGRILNVFRNFLFRFLNNLGIISM FT NNVLRGCEYVLYDVFQRVEAVDFEYNVQYKLY" FT CDS complement(1203..1631) FT /gene="TrAp" FT /gene_synonym="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q05H75" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q05H75" FT /protein_id="CAJ43224.1" FT /translation="MRSSSPSNSHCSLPSIKAQHRQAKKRKTIRRKRIDLTCGCSYYLN FT INCRNDGFTHRGIHHCSSTTEWRVYLGAKESPVFQNPGASRGVPVRSEPTQNQDPHNVQ FT PRVEESVGDTQGILGLSSLPSIDSAIWADLECIQELPF" FT CDS complement(1537..2634) FT /gene="AC1" FT /gene_synonym="Rep" FT /product="replication-associated protein" FT /function="virus replication" FT /db_xref="GOA:Q05H74" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q05H74" FT /protein_id="CAJ43225.1" FT /translation="MRTPGFRISARNIFLTYPKCSLSKEQALEQLCRIECPSDKLFIRV FT AQEAHQDGTMHLHALVQFKGKAQFRNARHFDLTHPHSTQIFHGNVQGAKSSSDVKSYIT FT KDGDYVDWGTFQIDGRPARGGRQTADDAVASALNSGTVQGAMNIIKELLPHNYVFQYHN FT LRSNLERIFAPPITVYTSFYKPTDFSQVPSVMTDWAESNVVDPSWRSDPAARPRRPMSI FT VVEGATRTGKTLWARSLGAHNYMCGHLDLSPKIFSNDAWYNVIDDVDPHYLKHFKEFMG FT AQMDWQSNIKYGKPTQIKGGIPTIFLCNPGPRSSYKEFLDEEQNESLKEWAYKNAVFVT FT LEQPLFSTEHQGTASTGEEAQNDSA" FT CDS complement(2235..2480) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q05H73" FT /protein_id="CAJ43226.1" FT /translation="MGLCISMPSSSSRVRPSSEMPDISTLPILIAHRFSMEMSREQRAH FT LMSNPTSPRTVTTSTGEHFRSTDDLLEEVGRQLTML" XX SQ Sequence 2762 BP; 730 A; 623 C; 621 G; 787 T; 1 other; accggatggc cgcccgcccg ccacgtgtct caatcctgac gctccgtgga gtcttattta 60 gcgcacccgg atttcaaatt tcactataaa acttggtcga caagttttac acatctatct 120 aaatgtggga cccattggtc aatgattttc ctgacacact gcatggattg cggtgtatgt 180 tagctgtgaa atttgtgcag gaattattgg agacctatcc gcgtgactcg aatggacgca 240 tcctattgga ggagctaatt tcggtgttgc gttgtaagcg ttatgccaaa gcgcagtttc 300 gatatggcgt tttctactcc aagacccagt gtacgtcgaa ggctcaactt cgacaaccca 360 tctgcaacac cgatgtcagt tcgtcgaact ccgagcacca gtcgtcgtag acaatggacc 420 aatcgcccca tgaatcgcaa accgcgtcta tatcgtatgt atcgctcacg cgatgtacca 480 tatgggtgcg agggaccatg taaagttcaa tcatttgaac aacggcatga tatcagtcat 540 actggtaagg tcatgtgtgt ttccgatgtc actagaggaa acaaccttac tcatcgtgtt 600 ggtaaacgat tttgtgttaa atctgtttac attattggca aaatttggat ggacgaaaac 660 atcaagacaa aaaaccatac aaacacagtc atgttttggc tagttcgtga tcgacgtcct 720 tttggaacgc ctatggattt gggtcaagtg ttcaacatgt atgataatga accctcgacc 780 gccactatca aaaacgacct acgtgatcgt taccaagtct tacgtaagtt cgattcaact 840 gttaccggag gtcaatatgc gtcgagggaa gcaaatgtca tcaagagatt ttggcgtgtc 900 aacaattatg tggtccataa ccaccaagaa gctgctaagt atgagaatca tactgaaaac 960 gcattattat tgtatatggc atgtactcat gcctcaaatc cagtgtatgc aacattaaag 1020 atcagnatct acttctatga ttcgatctca aattaataaa atctctgttt tattaatata 1080 acttatattg cacattatat tcgaagtcga ctgcttctac tctttgaaat acatcgtaca 1140 acacatattc gcaaccgcgt aatacattgt tcatcgaaat aattcctaaa ttatttaaaa 1200 atctaaaaag gaagttcctg aatacattca agatccgccc agattgcgga gtcaatcgat 1260 ggtaaactac taagtccaag aatgccttgt gtatccccaa cgctttcttc aacccgtggt 1320 tgaacattat gcggatcttg gttctgtgtt ggttcggatc gaacaggaac ccctcgtgat 1380 gctccaggat tttgaaagac aggggattct ttagctccca gataaacacg ccactctgta 1440 gttgagctgc agtgatggat tcccctgtgc gtgaatccgt cattccggca gttgatattt 1500 aggtaatacg aacagccaca ggtcagatcg attcgcttac gccgaatcgt tttgcgcttc 1560 ttcgcctgtc gatgctgtgc cttgatgctc ggtagagaac aatggctgtt cgagggtgac 1620 gaagaccgca ttcttgtaag cccactcctt caatgattcg ttttgttcct cgtcaaggaa 1680 ctctttatag gacgaacgtg gtcctggatt gcaaaggaag atggtgggaa tcccaccttt 1740 aatctgagtg ggcttaccgt atttgatatt gctttgccag tccatctggg cccccatgaa 1800 ctctttaaaa tgctttaaat aatgcggatc aacgtcatca atgacgttat accaagcatc 1860 gttggaaaag atctttggac taagatccag atgtccacac atgtaattat gggcccctaa 1920 tgatcgggcc cacaatgtct tccccgttct tgttgctcct tcaacaacta tgctcatcgg 1980 tcttctcggc cgcgcagcgg ggtcgctcct ccacgacgga tcaacaacgt tactttctgc 2040 ccagtctgtc ataacagacg gcacttgact aaagtcggtt ggcttgtaaa acgacgtgta 2100 aactgtaata ggaggagcga agatgcgttc aaggttagat ctcagattgt ggtactggaa 2160 cacataattg tgtggaagta attctttaat aatgttcata gcaccttgaa ccgtaccgga 2220 attcaacgcc gatgctacag catcgtcagc tgtctgccga cctcctctag caggtcgtcc 2280 gtcgatctga aatgttcccc agtcgacgta gtcaccgtcc ttggtgatgt aggatttgac 2340 atcagatgag ctctttgctc cctggacatt tccatggaaa atctgtgtgc tatgaggatg 2400 ggtaaggtcg aaatgtctgg catttcggaa ctgggcctta cccttgaact ggacgagggc 2460 atggagatgc atagtcccat cttgatgtgc ttcttgtgcg actctgatga acaatttatc 2520 cgacggacac tcgatgcgac agagctgttc gagagcttgt tctttcgaca acgaacattt 2580 ggggtaggtc agaaatatat ttctggcaga aatgcggaag cctggagttc tcatctttta 2640 aatgagagaa ggtgccacgt catcggtgta tcggtgtcgc ttcaaagttc ccagaattgg 2700 tgtcattggt gtcgcatata taggggtctc taataagggg tacggccatc cgcaataata 2760 tt 2762 //